BLASTX nr result

ID: Atractylodes22_contig00040042 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00040042
         (660 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29620.3| unnamed protein product [Vitis vinifera]              259   2e-67
ref|XP_002269047.1| PREDICTED: uncharacterized mitochondrial pro...   259   2e-67
ref|XP_002528785.1| RNA binding protein, putative [Ricinus commu...   256   3e-66
ref|XP_002329588.1| predicted protein [Populus trichocarpa] gi|2...   237   2e-60
ref|XP_004163762.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   235   5e-60

>emb|CBI29620.3| unnamed protein product [Vitis vinifera]
          Length = 730

 Score =  259 bits (663), Expect = 2e-67
 Identities = 136/211 (64%), Positives = 162/211 (76%), Gaps = 7/211 (3%)
 Frame = -3

Query: 613 AVLFSG*MNRRLTFFCHSILINTSKPARKSIAI-------NPGTNGFSLFRAFMYTSTRF 455
           AVL    + + +    H +L+N S  A  +  +       NP  NGFS FRAF + +   
Sbjct: 7   AVLAHRVLVKHVVLVNHVVLVNHSFSATNNFLLYAKSDFPNPRNNGFSFFRAFSFAAAN- 65

Query: 454 DNNSKFRRVNANLDQNDPSTLMKEDGVSVCSEIWIESFRNPNQTVTNLTNYLRRFELWVL 275
                 RR     D +DPSTLMKEDGV++CS++WI++FR P+ TVTNLT++LRRFELWVL
Sbjct: 66  ------RRTP---DPDDPSTLMKEDGVALCSQMWIDNFRVPDATVTNLTSFLRRFELWVL 116

Query: 274 AYQKVCADELGAYMPRSSVQRSALEDLLALRNAVLDNRFRWGARLEFFIKSPKDKIEYES 95
           AYQKVCADE+GAYMPRS++QRSALEDLL LRNAVLD+RF+WGARLEFFIKSPKDK EYES
Sbjct: 117 AYQKVCADEMGAYMPRSAIQRSALEDLLGLRNAVLDSRFKWGARLEFFIKSPKDKTEYES 176

Query: 94  LSKRKIRAILTTTQPSPFQDRIVQEVLFMIL 2
           LSKRKIRAILTTTQP+PFQD+IVQEVLFMIL
Sbjct: 177 LSKRKIRAILTTTQPAPFQDKIVQEVLFMIL 207


>ref|XP_002269047.1| PREDICTED: uncharacterized mitochondrial protein ymf11-like [Vitis
           vinifera]
          Length = 749

 Score =  259 bits (663), Expect = 2e-67
 Identities = 136/211 (64%), Positives = 162/211 (76%), Gaps = 7/211 (3%)
 Frame = -3

Query: 613 AVLFSG*MNRRLTFFCHSILINTSKPARKSIAI-------NPGTNGFSLFRAFMYTSTRF 455
           AVL    + + +    H +L+N S  A  +  +       NP  NGFS FRAF + +   
Sbjct: 10  AVLAHRVLVKHVVLVNHVVLVNHSFSATNNFLLYAKSDFPNPRNNGFSFFRAFSFAAAN- 68

Query: 454 DNNSKFRRVNANLDQNDPSTLMKEDGVSVCSEIWIESFRNPNQTVTNLTNYLRRFELWVL 275
                 RR     D +DPSTLMKEDGV++CS++WI++FR P+ TVTNLT++LRRFELWVL
Sbjct: 69  ------RRTP---DPDDPSTLMKEDGVALCSQMWIDNFRVPDATVTNLTSFLRRFELWVL 119

Query: 274 AYQKVCADELGAYMPRSSVQRSALEDLLALRNAVLDNRFRWGARLEFFIKSPKDKIEYES 95
           AYQKVCADE+GAYMPRS++QRSALEDLL LRNAVLD+RF+WGARLEFFIKSPKDK EYES
Sbjct: 120 AYQKVCADEMGAYMPRSAIQRSALEDLLGLRNAVLDSRFKWGARLEFFIKSPKDKTEYES 179

Query: 94  LSKRKIRAILTTTQPSPFQDRIVQEVLFMIL 2
           LSKRKIRAILTTTQP+PFQD+IVQEVLFMIL
Sbjct: 180 LSKRKIRAILTTTQPAPFQDKIVQEVLFMIL 210


>ref|XP_002528785.1| RNA binding protein, putative [Ricinus communis]
           gi|223531788|gb|EEF33607.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 732

 Score =  256 bits (653), Expect = 3e-66
 Identities = 133/205 (64%), Positives = 156/205 (76%), Gaps = 8/205 (3%)
 Frame = -3

Query: 592 MNRRLTFFCHSILIN--------TSKPARKSIAINPGTNGFSLFRAFMYTSTRFDNNSKF 437
           M R    F H IL N        T+    K+  +NP  NGF+LFR   +T          
Sbjct: 1   MRRCFAVFTHRILNNYNPIGTTTTTFLYSKNCPLNPRINGFALFRLLSFTPMH------- 53

Query: 436 RRVNANLDQNDPSTLMKEDGVSVCSEIWIESFRNPNQTVTNLTNYLRRFELWVLAYQKVC 257
                N D +DP+TLMKEDGVSVCS++WIE+FR P++TV NLT+YLRRFELWVLAYQKV 
Sbjct: 54  ---RRNPDPDDPATLMKEDGVSVCSQMWIENFREPDRTVNNLTSYLRRFELWVLAYQKVS 110

Query: 256 ADELGAYMPRSSVQRSALEDLLALRNAVLDNRFRWGARLEFFIKSPKDKIEYESLSKRKI 77
           ADE+GAY+PRS++QRSALEDLLALRNAVLDNRF+WGARL+FFIKSPKDK +YESLSKRKI
Sbjct: 111 ADEMGAYLPRSAIQRSALEDLLALRNAVLDNRFKWGARLQFFIKSPKDKTDYESLSKRKI 170

Query: 76  RAILTTTQPSPFQDRIVQEVLFMIL 2
           +AILTTTQP+ FQD+IVQEVLFMIL
Sbjct: 171 KAILTTTQPAAFQDKIVQEVLFMIL 195


>ref|XP_002329588.1| predicted protein [Populus trichocarpa] gi|222870297|gb|EEF07428.1|
           predicted protein [Populus trichocarpa]
          Length = 675

 Score =  237 bits (604), Expect = 2e-60
 Identities = 112/138 (81%), Positives = 130/138 (94%)
 Frame = -3

Query: 415 DQNDPSTLMKEDGVSVCSEIWIESFRNPNQTVTNLTNYLRRFELWVLAYQKVCADELGAY 236
           D +DPS LMKEDGVSVCS++WIE+FR P++ V+NLT YLRRFELWVLAYQKVCAD++GAY
Sbjct: 1   DPDDPSNLMKEDGVSVCSQMWIENFREPDRIVSNLTTYLRRFELWVLAYQKVCADDMGAY 60

Query: 235 MPRSSVQRSALEDLLALRNAVLDNRFRWGARLEFFIKSPKDKIEYESLSKRKIRAILTTT 56
           MPRS++QRSALEDLLALRNAVLDNRF+WGARL+F IKSPKDK +Y+SLSKRKI+AILTTT
Sbjct: 61  MPRSAIQRSALEDLLALRNAVLDNRFKWGARLDFLIKSPKDKTDYQSLSKRKIKAILTTT 120

Query: 55  QPSPFQDRIVQEVLFMIL 2
           QP+ FQD+IVQEVLFMIL
Sbjct: 121 QPAAFQDKIVQEVLFMIL 138


>ref|XP_004163762.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized mitochondrial
           protein ymf11-like [Cucumis sativus]
          Length = 722

 Score =  235 bits (600), Expect = 5e-60
 Identities = 123/204 (60%), Positives = 152/204 (74%), Gaps = 7/204 (3%)
 Frame = -3

Query: 592 MNRRLTFFCHSILINTSKPARKS----IAINP---GTNGFSLFRAFMYTSTRFDNNSKFR 434
           M+R +  F H I  ++S     S      +NP     +GF L R F +           R
Sbjct: 1   MHRGVFIFAHRIFASSSVVRTSSGFTFSELNPLKSSFHGFPLCRVFSFVPAH-------R 53

Query: 433 RVNANLDQNDPSTLMKEDGVSVCSEIWIESFRNPNQTVTNLTNYLRRFELWVLAYQKVCA 254
           R     D NDPS LMKEDG+S CS++WIE+FR P++ V+NLT YL++FELWVLAYQKVCA
Sbjct: 54  RAP---DPNDPSNLMKEDGISACSQMWIENFREPDRIVSNLTTYLQKFELWVLAYQKVCA 110

Query: 253 DELGAYMPRSSVQRSALEDLLALRNAVLDNRFRWGARLEFFIKSPKDKIEYESLSKRKIR 74
           DE+G+YMPR+++QRSALEDLLALRNAVLD+RF WGARL+FFIKSPKDK +YE+LSKRKI+
Sbjct: 111 DEMGSYMPRNAIQRSALEDLLALRNAVLDSRFNWGARLKFFIKSPKDKTDYEALSKRKIK 170

Query: 73  AILTTTQPSPFQDRIVQEVLFMIL 2
           AILTTTQP+ FQD+IVQEVLF+IL
Sbjct: 171 AILTTTQPAAFQDKIVQEVLFLIL 194


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