BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00039953
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containi...   105   5e-21
ref|XP_002518652.1| pentatricopeptide repeat-containing protein,...    88   8e-16
ref|XP_004172163.1| PREDICTED: pentatricopeptide repeat-containi...    87   1e-15
ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containi...    87   1e-15
ref|NP_195906.1| pentatricopeptide repeat-containing protein [Ar...    77   1e-12

>ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860
           [Vitis vinifera]
          Length = 811

 Score =  105 bits (261), Expect = 5e-21
 Identities = 54/91 (59%), Positives = 68/91 (74%), Gaps = 1/91 (1%)
 Frame = +1

Query: 1   RRIGKHDDPNKGRPWS-SHLSPRGEQIFQTLIDPDFHTFQINENLLKLVDFHGNESEFSS 177
           RRIGK  D N+G+PWS   LSP G++I QTLIDP F+  QI+E LL+L +    ES+FS 
Sbjct: 64  RRIGKSQDANRGKPWSHGRLSPPGQRILQTLIDPTFNLAQIDELLLELFEQQPGESDFSV 123

Query: 178 KSLSLDVLGLVQGLVHYKKFDLALSVFDWVK 270
           +SLSLDVLG+V+GL  YKK D AL VF+WV+
Sbjct: 124 ESLSLDVLGIVKGLGFYKKCDTALRVFEWVR 154


>ref|XP_002518652.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542033|gb|EEF43577.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 827

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 46/95 (48%), Positives = 66/95 (69%), Gaps = 5/95 (5%)
 Frame = +1

Query: 4   RIGKHDDPNKGRPWSSH-LSPRGEQIFQTLIDPDFHTFQINENLLKLVDF-HGNESEFSS 177
           RI K  DPN+G+PW+SH LS  G+Q+  +LIDP F   ++++ L +L ++ H  E   SS
Sbjct: 78  RISKARDPNRGKPWASHRLSTLGQQVLDSLIDPCFEGSELDKVLSQLFEYYHKEELSLSS 137

Query: 178 ---KSLSLDVLGLVQGLVHYKKFDLALSVFDWVKE 273
               SLS+DVLG+++GL  YKK D+A+SVF WV+E
Sbjct: 138 GTWNSLSMDVLGIIKGLGFYKKCDMAMSVFSWVRE 172


>ref|XP_004172163.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g02860-like [Cucumis sativus]
          Length = 831

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 41/90 (45%), Positives = 66/90 (73%), Gaps = 1/90 (1%)
 Frame = +1

Query: 4   RIGKHDDPNKGRPWSSH-LSPRGEQIFQTLIDPDFHTFQINENLLKLVDFHGNESEFSSK 180
           RIG+  DPN+G+PWS H LS +G++I  +L++P+F +  ++E LL+L +   +   F+S 
Sbjct: 85  RIGRSHDPNRGKPWSHHRLSTQGQRILDSLLNPEFDSSSLDEILLQLFETSSDGLNFTSD 144

Query: 181 SLSLDVLGLVQGLVHYKKFDLALSVFDWVK 270
           S+S D+LG+++GLV YKK +LAL VF +V+
Sbjct: 145 SVSFDILGIIKGLVFYKKNELALCVFYFVR 174


>ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g02860-like [Cucumis sativus]
          Length = 831

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 41/90 (45%), Positives = 66/90 (73%), Gaps = 1/90 (1%)
 Frame = +1

Query: 4   RIGKHDDPNKGRPWSSH-LSPRGEQIFQTLIDPDFHTFQINENLLKLVDFHGNESEFSSK 180
           RIG+  DPN+G+PWS H LS +G++I  +L++P+F +  ++E LL+L +   +   F+S 
Sbjct: 85  RIGRSHDPNRGKPWSHHRLSTQGQRILDSLLNPEFDSSSLDEILLQLFETSSDGLNFTSD 144

Query: 181 SLSLDVLGLVQGLVHYKKFDLALSVFDWVK 270
           S+S D+LG+++GLV YKK +LAL VF +V+
Sbjct: 145 SVSFDILGIIKGLVFYKKNELALCVFYFVR 174


>ref|NP_195906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75181167|sp|Q9LYZ9.1|PP362_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g02860 gi|7413561|emb|CAB86040.1| putative protein
           [Arabidopsis thaliana] gi|332003145|gb|AED90528.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 819

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 40/88 (45%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
 Frame = +1

Query: 4   RIGKHDDPNKGRPWSSH-LSPRGEQIFQTLIDPDFHTFQINENLLKLVDFHGNESEFSSK 180
           RIGK  DPN G+PWS H LSP+G+Q+ ++LI+P+F + Q++  L +L +   ++ E    
Sbjct: 77  RIGKSRDPNLGKPWSYHGLSPQGQQVLRSLIEPNFDSGQLDSVLSELFEPFKDKPE---- 132

Query: 181 SLSLDVLGLVQGLVHYKKFDLALSVFDW 264
           S S ++L  ++GL  +KKFDLAL  FDW
Sbjct: 133 STSSELLAFLKGLGFHKKFDLALRAFDW 160