BLASTX nr result

ID: Atractylodes22_contig00039896 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00039896
         (711 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302548.1| predicted protein [Populus trichocarpa] gi|2...   280   2e-73
ref|XP_002320744.1| predicted protein [Populus trichocarpa] gi|2...   270   3e-70
emb|CBI38799.3| unnamed protein product [Vitis vinifera]              266   2e-69
ref|XP_002270775.1| PREDICTED: uncharacterized protein LOC100247...   266   2e-69
ref|XP_002511748.1| nucleotide binding protein, putative [Ricinu...   263   2e-68

>ref|XP_002302548.1| predicted protein [Populus trichocarpa] gi|222844274|gb|EEE81821.1|
            predicted protein [Populus trichocarpa]
          Length = 2104

 Score =  280 bits (717), Expect = 2e-73
 Identities = 148/238 (62%), Positives = 172/238 (72%), Gaps = 2/238 (0%)
 Frame = -3

Query: 709  ILMLVEDHLRLQSKLFCSTRIQAGSASPLSAVLHVGN-CTNLSAIPKPLEGGDLSKDSGG 533
            ILMLVEDHLRLQSKL C++R+   S SPLS V  + N  ++L A      G   S DSGG
Sbjct: 1328 ILMLVEDHLRLQSKLSCASRVADSSPSPLSLVSPLNNRSSSLGADSFEALGDRRSSDSGG 1387

Query: 532  LPFDVLASMADGKGEISASVMELLTAAAAAEPYDSVSCAFVSYGSCVIDLAEGWKYRSRL 353
            LP DVLASMAD  G+ISASVME LTAAAAAEPY+SV CAFVSYGSC++DLAEGWK+RSRL
Sbjct: 1388 LPLDVLASMADANGQISASVMERLTAAAAAEPYESVLCAFVSYGSCMMDLAEGWKFRSRL 1447

Query: 352  WYGVGQPSNTADFXXXXXGWDSWKSCLEKDSNGNWVEIPLIKKCVSMLQALLLDEXXXXX 173
            WYGVG  S TA F     GW+SW+S LEKD+NGNW+E+PL+KK V+MLQALLLDE     
Sbjct: 1448 WYGVGMSSKTAPFGGGGSGWESWRSTLEKDANGNWIELPLVKKSVAMLQALLLDESGLGG 1507

Query: 172  XXXXXXXXXXXXXXXTALYHLLDSDQPFFCMLRMALLSLREDD-GENGMLMKNANVDD 2
                            ALY LLDSDQPF CMLRM LLS+RE+D GE  +LM+N ++DD
Sbjct: 1508 GLGIGGGSGTGMGGMAALYQLLDSDQPFLCMLRMVLLSMREEDNGETSLLMRNVSMDD 1565


>ref|XP_002320744.1| predicted protein [Populus trichocarpa] gi|222861517|gb|EEE99059.1|
            predicted protein [Populus trichocarpa]
          Length = 1726

 Score =  270 bits (689), Expect = 3e-70
 Identities = 146/241 (60%), Positives = 171/241 (70%), Gaps = 5/241 (2%)
 Frame = -3

Query: 709  ILMLVEDHLRLQSKLFCSTRIQAGSASPLSAVLHVGNCTNLSAI--PKPLE--GGDLSKD 542
            ILMLVEDHLRLQSKL  ++ +   S+ PLS V  + N ++  A      LE  G   S D
Sbjct: 1452 ILMLVEDHLRLQSKLSSASSVVDSSSPPLSLVSPLNNHSSSPASIGTDSLEALGDRRSSD 1511

Query: 541  SGGLPFDVLASMADGKGEISASVMELLTAAAAAEPYDSVSCAFVSYGSCVIDLAEGWKYR 362
            SGGLP DVLASMAD  G+ISASVME LTAAAAAEP++SVSCAFVSYGSC +DLAEGWK+R
Sbjct: 1512 SGGLPLDVLASMADANGQISASVMERLTAAAAAEPFESVSCAFVSYGSCTMDLAEGWKFR 1571

Query: 361  SRLWYGVGQPSNTADFXXXXXGWDSWKSCLEKDSNGNWVEIPLIKKCVSMLQALLLDEXX 182
            SRLWYGVG PS TA F     GW SW+S LEKD+NGNW+E+PL+KK V+MLQALLLDE  
Sbjct: 1572 SRLWYGVGLPSKTAPFGGGGSGWKSWRSTLEKDANGNWIELPLVKKSVAMLQALLLDESG 1631

Query: 181  XXXXXXXXXXXXXXXXXXTALYHLLDSDQPFFCMLRMALLSLREDD-GENGMLMKNANVD 5
                               ALY LLDSDQPF C+LRM LLS+RE+D GE  MLM+N +++
Sbjct: 1632 LGGGLGIGGGSGTGMGGMAALYQLLDSDQPFLCILRMVLLSMREEDNGETSMLMRNVSME 1691

Query: 4    D 2
            D
Sbjct: 1692 D 1692


>emb|CBI38799.3| unnamed protein product [Vitis vinifera]
          Length = 2455

 Score =  266 bits (681), Expect = 2e-69
 Identities = 149/248 (60%), Positives = 171/248 (68%), Gaps = 12/248 (4%)
 Frame = -3

Query: 709  ILMLVEDHLRLQSKLFCSTRIQAGSASPLSAVLHVGNCTN---------LSAIP--KPLE 563
            ILMLVEDHLRLQSKL C++    GS SPLS V  + N +N           A+   K L 
Sbjct: 896  ILMLVEDHLRLQSKLSCTSHSVDGSVSPLSLVSPLSNYSNSFKTIGEDSTEAVGNRKSLS 955

Query: 562  GGDLSKDSGGLPFDVLASMADGKGEISASVMELLTAAAAAEPYDSVSCAFVSYGSCVIDL 383
            GG     SGG+P DVLASMAD  G+ISASVME LTAAAAAEPY+SVSCAFVSYGSC +DL
Sbjct: 956  GG-----SGGVPLDVLASMADANGQISASVMERLTAAAAAEPYESVSCAFVSYGSCAMDL 1010

Query: 382  AEGWKYRSRLWYGVGQPSNTADFXXXXXGWDSWKSCLEKDSNGNWVEIPLIKKCVSMLQA 203
            AEGWKYRSRLWYGVG  S TA F     GW+SWKS LEKD+NG+W+E+PL+KK V+MLQA
Sbjct: 1011 AEGWKYRSRLWYGVGS-STTAVFGGGGSGWESWKSTLEKDANGHWIELPLVKKSVTMLQA 1069

Query: 202  LLLDEXXXXXXXXXXXXXXXXXXXXTALYHLLDSDQPFFCMLRMALLSLR-EDDGENGML 26
            LLLDE                     ALY LLDSDQPF CMLRM L+S+R EDDG + ML
Sbjct: 1070 LLLDESGLGGGLGIGGGSGTGMGGMAALYQLLDSDQPFLCMLRMVLVSMREEDDGADSML 1129

Query: 25   MKNANVDD 2
            M+N + +D
Sbjct: 1130 MRNVSFED 1137


>ref|XP_002270775.1| PREDICTED: uncharacterized protein LOC100247154 [Vitis vinifera]
          Length = 2997

 Score =  266 bits (681), Expect = 2e-69
 Identities = 149/248 (60%), Positives = 171/248 (68%), Gaps = 12/248 (4%)
 Frame = -3

Query: 709  ILMLVEDHLRLQSKLFCSTRIQAGSASPLSAVLHVGNCTN---------LSAIP--KPLE 563
            ILMLVEDHLRLQSKL C++    GS SPLS V  + N +N           A+   K L 
Sbjct: 1389 ILMLVEDHLRLQSKLSCTSHSVDGSVSPLSLVSPLSNYSNSFKTIGEDSTEAVGNRKSLS 1448

Query: 562  GGDLSKDSGGLPFDVLASMADGKGEISASVMELLTAAAAAEPYDSVSCAFVSYGSCVIDL 383
            GG     SGG+P DVLASMAD  G+ISASVME LTAAAAAEPY+SVSCAFVSYGSC +DL
Sbjct: 1449 GG-----SGGVPLDVLASMADANGQISASVMERLTAAAAAEPYESVSCAFVSYGSCAMDL 1503

Query: 382  AEGWKYRSRLWYGVGQPSNTADFXXXXXGWDSWKSCLEKDSNGNWVEIPLIKKCVSMLQA 203
            AEGWKYRSRLWYGVG  S TA F     GW+SWKS LEKD+NG+W+E+PL+KK V+MLQA
Sbjct: 1504 AEGWKYRSRLWYGVGS-STTAVFGGGGSGWESWKSTLEKDANGHWIELPLVKKSVTMLQA 1562

Query: 202  LLLDEXXXXXXXXXXXXXXXXXXXXTALYHLLDSDQPFFCMLRMALLSLR-EDDGENGML 26
            LLLDE                     ALY LLDSDQPF CMLRM L+S+R EDDG + ML
Sbjct: 1563 LLLDESGLGGGLGIGGGSGTGMGGMAALYQLLDSDQPFLCMLRMVLVSMREEDDGADSML 1622

Query: 25   MKNANVDD 2
            M+N + +D
Sbjct: 1623 MRNVSFED 1630


>ref|XP_002511748.1| nucleotide binding protein, putative [Ricinus communis]
            gi|223548928|gb|EEF50417.1| nucleotide binding protein,
            putative [Ricinus communis]
          Length = 2920

 Score =  263 bits (673), Expect = 2e-68
 Identities = 148/241 (61%), Positives = 166/241 (68%), Gaps = 10/241 (4%)
 Frame = -3

Query: 709  ILMLVEDHLRLQSKLFCSTRIQAGSASPLSAVLHVGNCTN--LSAIPKPLE--GGDLSKD 542
            ILMLVEDHLRLQSKL C++R+   S SPLS V  + N  +   SA     E  G   S D
Sbjct: 1327 ILMLVEDHLRLQSKLSCASRVVDSSPSPLSLVSPLNNRPSSLASADRDSFEALGDRKSSD 1386

Query: 541  SGGLPFDV-----LASMADGKGEISASVMELLTAAAAAEPYDSVSCAFVSYGSCVIDLAE 377
            SGGLP DV     LASMAD  G+ISASVME LTAAAAAEPY+SV CAFVSYGS  +DL+E
Sbjct: 1387 SGGLPLDVYFLKVLASMADANGQISASVMERLTAAAAAEPYESVYCAFVSYGSIAMDLSE 1446

Query: 376  GWKYRSRLWYGVGQPSNTADFXXXXXGWDSWKSCLEKDSNGNWVEIPLIKKCVSMLQALL 197
            GWKYRSRLWYGVG PS TA F     GW+SW+S LEKD+NGNW+E+PL+KK VSMLQALL
Sbjct: 1447 GWKYRSRLWYGVGFPSKTAVFGGGGSGWESWRSALEKDANGNWIELPLVKKSVSMLQALL 1506

Query: 196  LDEXXXXXXXXXXXXXXXXXXXXTALYHLLDSDQPFFCMLRMALLSLR-EDDGENGMLMK 20
            LDE                      LY LLDSDQPF CMLRM LLS+R EDDGE  ML++
Sbjct: 1507 LDESGLGGGLGIGGGSGTGMGGMALLYQLLDSDQPFLCMLRMVLLSMREEDDGETSMLLR 1566

Query: 19   N 17
            N
Sbjct: 1567 N 1567


Top