BLASTX nr result

ID: Atractylodes22_contig00039873 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00039873
         (444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABH07899.1| putative polyprotein [Solanum lycopersicum]            126   2e-27
dbj|BAD99219.1| polypeptide with a gag-like domain [Petunia x hy...   120   9e-26
gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsi...   115   4e-24
emb|CAN74819.1| hypothetical protein VITISV_034590 [Vitis vinifera]   114   8e-24
emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]   113   2e-23

>gb|ABH07899.1| putative polyprotein [Solanum lycopersicum]
          Length = 1428

 Score =  126 bits (316), Expect = 2e-27
 Identities = 56/145 (38%), Positives = 97/145 (66%)
 Frame = -3

Query: 436 LALETKNKKGFIDGSVTRPMNDDVLGKQWDRCNSVLLSWILNSVSDELYLGQVFSKVASV 257
           +AL  + K GF+ G+ TR +  D L +QW+ CN+++LSW++N+VS+EL  G V++  +  
Sbjct: 44  IALLGRRKYGFVTGACTRALYKDELHEQWETCNAIVLSWLMNTVSEELLSGIVYATNSCS 103

Query: 256 VWEELKETYDKVDGSVMFNLHQKINSLTQNGMPVSEYYHKLNSLWKQFDALVKLPECSCH 77
           VW +LKE +DKV+   ++ LH+ I +L+Q    VS Y+ KL +LW ++D +V  P  +C 
Sbjct: 104 VWNDLKERFDKVNRVRIYQLHRDITTLSQGTDSVSHYFSKLKTLWNEYDVIVPSPCSTCS 163

Query: 76  AARSFSYHSQVIKLMQFLMGLDDVY 2
            ++ ++ H + ++L+QFL GL++ Y
Sbjct: 164 QSKEYNDHLEQMRLIQFLSGLNESY 188


>dbj|BAD99219.1| polypeptide with a gag-like domain [Petunia x hybrida]
          Length = 463

 Score =  120 bits (302), Expect = 9e-26
 Identities = 55/151 (36%), Positives = 97/151 (64%), Gaps = 4/151 (2%)
 Frame = -3

Query: 442 LILALETKNKKGFIDGSVTRPMNDDVLGKQWDRCNSVLLSWILNSVSDELYLGQVFSKVA 263
           ++++L  KNK GFI G+  +P  +D+L +QW RC+ ++L+W+LNS+S E+    ++S+ A
Sbjct: 66  VLISLSAKNKLGFITGAYKKPDKEDLLFEQWRRCSDMVLAWLLNSLSKEIAESVLYSQTA 125

Query: 262 SVVWEELKETYDKVDGSVMFNLHQKINSLTQNGMPVSEYYHKLNSLWKQFDALVKLPECS 83
             +W+EL++ Y ++DG+ MF L +++N+++Q    V+ Y++KL  +W Q   L     CS
Sbjct: 126 QELWQELEQRYGQIDGTKMFQLQRELNNVSQGTNDVAAYFNKLKRIWDQMKVLNTFMVCS 185

Query: 82  CHAARSFSYHSQVI----KLMQFLMGLDDVY 2
           C        H+  +    +L+QFLMGL++VY
Sbjct: 186 CECNCEAKGHNAKMQEDQQLIQFLMGLNEVY 216


>gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1454

 Score =  115 bits (288), Expect = 4e-24
 Identities = 54/148 (36%), Positives = 91/148 (61%), Gaps = 1/148 (0%)
 Frame = -3

Query: 442 LILALETKNKKGFIDGSVTRPMNDDVLGKQWDRCNSVLLSWILNSVSDELYLGQVFSKVA 263
           ++++L+ KNK GFIDG+++RP+  D+  + W RCNS++ SW+LNSVS ++Y   +    A
Sbjct: 91  MLISLDAKNKTGFIDGTLSRPLESDLNFRLWSRCNSMVKSWLLNSVSPQIYRSILRMNDA 150

Query: 262 SVVWEELKETYDKVDGSVMFNLHQKINSLTQNGMPVSEYYHKLNSLWKQFDALVKLPE-C 86
           S +W +L   ++  +    +NL Q+I    Q  + +SEYY +L +LW Q D+   L E C
Sbjct: 151 SDIWRDLNSRFNVTNLPRTYNLTQEIQDFRQGTLSLSEYYTRLKTLWDQLDSTEALDEPC 210

Query: 85  SCHAARSFSYHSQVIKLMQFLMGLDDVY 2
           +C  A      ++  K+++FL GL++ Y
Sbjct: 211 TCGKAMRLQQKAEQAKIVKFLAGLNESY 238


>emb|CAN74819.1| hypothetical protein VITISV_034590 [Vitis vinifera]
          Length = 970

 Score =  114 bits (285), Expect = 8e-24
 Identities = 53/147 (36%), Positives = 90/147 (61%)
 Frame = -3

Query: 442 LILALETKNKKGFIDGSVTRPMNDDVLGKQWDRCNSVLLSWILNSVSDELYLGQVFSKVA 263
           +++AL  KNK  FIDGS+  P +DD+L   W RCNS+++SWILNSV  ++    ++   A
Sbjct: 57  MVMALTAKNKISFIDGSIPCPESDDLLFGTWIRCNSMVISWILNSVHKDIADSLLYFDTA 116

Query: 262 SVVWEELKETYDKVDGSVMFNLHQKINSLTQNGMPVSEYYHKLNSLWKQFDALVKLPECS 83
             +W +L++ + + +G  +F + + + +L+Q  + VS YY +L  LW +      LPEC+
Sbjct: 117 VGIWNDLRDRFCQSNGPRIFQIKKHLIALSQGSLDVSTYYTRLKILWDELKGFQPLPECA 176

Query: 82  CHAARSFSYHSQVIKLMQFLMGLDDVY 2
           C   +++    Q   +MQFLMGL++ +
Sbjct: 177 CGTMKTWMEFQQQEYVMQFLMGLNESF 203


>emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]
          Length = 1523

 Score =  113 bits (282), Expect = 2e-23
 Identities = 53/145 (36%), Positives = 83/145 (57%)
 Frame = -3

Query: 436 LALETKNKKGFIDGSVTRPMNDDVLGKQWDRCNSVLLSWILNSVSDELYLGQVFSKVASV 257
           +AL  KNKKGF+DG++ RP ++    +QWDRCN ++ +W+L ++S E+    +  K A  
Sbjct: 63  MALTIKNKKGFVDGTLNRPTHNPNEQQQWDRCNILVKTWLLGAISKEISNSVIHCKDAKT 122

Query: 256 VWEELKETYDKVDGSVMFNLHQKINSLTQNGMPVSEYYHKLNSLWKQFDALVKLPECSCH 77
           +W EL+E +   +   +FN+   I+   Q    V+ ++ KL  LW + DAL   P C+C 
Sbjct: 123 MWLELQERFSHTNTVQLFNIENAIHECAQGTGTVTSFFTKLKGLWDEKDALCGFPPCTCA 182

Query: 76  AARSFSYHSQVIKLMQFLMGLDDVY 2
            A     + +  K M+FLMGL D Y
Sbjct: 183 TAAEVKTYMETQKTMKFLMGLGDNY 207


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