BLASTX nr result

ID: Atractylodes22_contig00039861 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00039861
         (476 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...    72   6e-11
ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808...    65   4e-09
ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812...    65   4e-09
ref|XP_003636545.1| Pentatricopeptide repeat-containing protein ...    64   1e-08
gb|ACJ85145.1| unknown [Medicago truncatula] gi|388517775|gb|AFK...    59   4e-07

>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
           finger, CCHC-type; Peptidase aspartic, active site;
           Polynucleotidyl transferase, Ribonuclease H fold
           [Medicago truncatula]
          Length = 1297

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 27/64 (42%), Positives = 45/64 (70%)
 Frame = -1

Query: 215 EDRRHNDKNRGINHLPYAELMDRKAKGLCFRCGERYHPLHQCAERQFRMVILGDDETVDA 36
           + ++   ++R   HL Y ELM+RK KGLCF+CG  +HP+HQC ++Q R+++L +DE  + 
Sbjct: 85  DKKKSGPRDRSFTHLSYNELMERKQKGLCFKCGGPFHPMHQCPDKQLRVLVLEEDEEGEP 144

Query: 35  TGEV 24
            G++
Sbjct: 145 EGKL 148


>ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808652 [Glycine max]
          Length = 463

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 32/78 (41%), Positives = 49/78 (62%), Gaps = 12/78 (15%)
 Frame = -1

Query: 200 NDKNRGINHLPYAELMDRKAKGLCFRCGERYHP-LHQCAERQFRMVILGDDETVDATGEV 24
           ++K +G+  +   E+ +R+AKGLCF+CG +YHP LH+C ER  R++ILG+ E ++  GE+
Sbjct: 293 SEKWKGVRSIRNNEMAERRAKGLCFKCGGKYHPTLHKCPERALRVLILGEGEALNDEGEI 352

Query: 23  -----------EEETVEC 3
                      EE  VEC
Sbjct: 353 MAMEAVQPDSEEEIEVEC 370


>ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812827 [Glycine max]
          Length = 572

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 33/77 (42%), Positives = 46/77 (59%), Gaps = 12/77 (15%)
 Frame = -1

Query: 197 DKNRGINHLPYAELMDRKAKGLCFRCGERYHP-LHQCAERQFRMVILGDDETVDATGEV- 24
           D+ +GI  +   E  +R+AKGLCF+CG +YHP  H+C ER  R++ILG+ ET+   GE+ 
Sbjct: 310 DRWKGIRSIHNEEFEERRAKGLCFKCGGKYHPTFHKCLERALRVLILGEGETMTKEGEIV 369

Query: 23  ----------EEETVEC 3
                     EE  VEC
Sbjct: 370 SMKDVTVESEEEVEVEC 386


>ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355502480|gb|AES83683.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 26/56 (46%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
 Frame = -1

Query: 188  RGINHLPYAELMDRKAKGLCFRCGERYHP-LHQCAERQFRMVILGDDETVDATGEV 24
            +G+  +   E+ +R+AKGLCF+CG +YHP LH+C E+  R++ILG+ E V+  GE+
Sbjct: 922  KGVRSIQNGEMAERRAKGLCFKCGGKYHPTLHKCPEKSLRVLILGEGEGVNEEGEI 977


>gb|ACJ85145.1| unknown [Medicago truncatula] gi|388517775|gb|AFK46949.1| unknown
           [Medicago truncatula]
          Length = 185

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 24/46 (52%), Positives = 36/46 (78%), Gaps = 1/46 (2%)
 Frame = -1

Query: 158 LMDRKAKGLCFRCGERYHP-LHQCAERQFRMVILGDDETVDATGEV 24
           + +R+AKGLCF+CG +YHP LH+C E+  R++ILG+ E V+  GE+
Sbjct: 1   MAERRAKGLCFKCGGKYHPTLHKCPEKSLRVLILGEGEGVNEEGEI 46


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