BLASTX nr result

ID: Atractylodes22_contig00039805 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00039805
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   148   5e-34
ref|XP_004140366.1| PREDICTED: uncharacterized protein LOC101210...   130   1e-28
gb|AAD39272.1|AC007203_4 Similar to retrotransposon polyprotein ...   124   1e-26
emb|CAJ00278.1| hypothetical protein [Lotus japonicus]                122   4e-26
ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216...   121   7e-26

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  148 bits (373), Expect = 5e-34
 Identities = 70/113 (61%), Positives = 92/113 (81%)
 Frame = +2

Query: 2    RDPPTLLKIGKGQTVVDSLDEQLQLRDAILDELRMNLLRAQQKQKKWADLRRTDREFKIG 181
            RDPP +++  KGQT V+SL+  LQ RDAI+D+L++NL+RAQQ+ K +AD  RT+ EF++G
Sbjct: 1395 RDPPHVVRAPKGQTSVESLEAMLQDRDAIIDDLQVNLVRAQQRMKHYADGSRTEVEFQVG 1454

Query: 182  DWVFLKLQPYRQQSLAKRPCEKLTARFYGPYRVTQRIGKVAYKLELPPEARVH 340
            D VFL+LQPYRQ+SLAKRP EKL  RFYGP+ V QRIG  AYKL+LPP +++H
Sbjct: 1455 DAVFLRLQPYRQRSLAKRPFEKLAPRFYGPFTVLQRIGATAYKLQLPPSSKIH 1507


>ref|XP_004140366.1| PREDICTED: uncharacterized protein LOC101210176 [Cucumis sativus]
          Length = 1740

 Score =  130 bits (326), Expect = 1e-28
 Identities = 62/113 (54%), Positives = 86/113 (76%)
 Frame = +2

Query: 2   RDPPTLLKIGKGQTVVDSLDEQLQLRDAILDELRMNLLRAQQKQKKWADLRRTDREFKIG 181
           R PP L+  G  +T  +S+++ L+ RD ++  L+ NLL AQ + KK ADLRR + +FK+G
Sbjct: 496 RPPPPLILYGDRKTNNNSVEQLLKERDLVISALKENLLTAQNRMKKQADLRRRELKFKVG 555

Query: 182 DWVFLKLQPYRQQSLAKRPCEKLTARFYGPYRVTQRIGKVAYKLELPPEARVH 340
           D V+LKL+PYRQ+SLAK+ CEKL A+FYGPYRV + IG+VAY+L+LP EA +H
Sbjct: 556 DEVYLKLRPYRQRSLAKKRCEKLAAKFYGPYRVMEEIGEVAYRLDLPLEAMIH 608


>gb|AAD39272.1|AC007203_4 Similar to retrotransposon polyprotein [Arabidopsis thaliana]
          Length = 1264

 Score =  124 bits (310), Expect = 1e-26
 Identities = 55/113 (48%), Positives = 82/113 (72%)
 Frame = +2

Query: 2    RDPPTLLKIGKGQTVVDSLDEQLQLRDAILDELRMNLLRAQQKQKKWADLRRTDREFKIG 181
            RDPP+L++   G T    L+ QL+ RD +L+ +R NL RAQ+  K+ AD++R D  F +G
Sbjct: 1000 RDPPSLVRFELGSTDNWDLEVQLKERDLMLEHIRANLQRAQEIMKRNADMKRRDVVFAVG 1059

Query: 182  DWVFLKLQPYRQQSLAKRPCEKLTARFYGPYRVTQRIGKVAYKLELPPEARVH 340
            DWV LKLQPYRQ+++ +RPC KL A+F+GP+ + +RIG VAY++ LP  +++H
Sbjct: 1060 DWVHLKLQPYRQRTVVRRPCYKLAAKFFGPFEIVERIGNVAYRINLPASSKIH 1112


>emb|CAJ00278.1| hypothetical protein [Lotus japonicus]
          Length = 1508

 Score =  122 bits (305), Expect = 4e-26
 Identities = 55/100 (55%), Positives = 72/100 (72%)
 Frame = +2

Query: 41   TVVDSLDEQLQLRDAILDELRMNLLRAQQKQKKWADLRRTDREFKIGDWVFLKLQPYRQQ 220
            T+VD++D     R+ ++ +L  NL+RAQ + K  AD  RTDREF +GDWV LKLQPYRQ 
Sbjct: 1315 TIVDAVDRSFTAREQMIQKLHANLMRAQARMKIQADKHRTDREFSVGDWVLLKLQPYRQS 1374

Query: 221  SLAKRPCEKLTARFYGPYRVTQRIGKVAYKLELPPEARVH 340
            S   R  EKL+ RF+GPY+V  R+GKVAY L LPPE+++H
Sbjct: 1375 STQHRASEKLSPRFFGPYQVLHRVGKVAYTLALPPESKIH 1414


>ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216833 [Cucumis sativus]
          Length = 2712

 Score =  121 bits (303), Expect = 7e-26
 Identities = 61/113 (53%), Positives = 80/113 (70%)
 Frame = +2

Query: 2    RDPPTLLKIGKGQTVVDSLDEQLQLRDAILDELRMNLLRAQQKQKKWADLRRTDREFKIG 181
            R PP LL  G   T    LDEQL+ RD +L+ L+ +L  AQ K KK ADL+R D E+K+G
Sbjct: 2243 RTPPPLLYYGDQSTSNFLLDEQLKARDEVLEVLKEHLRVAQDKMKKTADLKRRDVEYKVG 2302

Query: 182  DWVFLKLQPYRQQSLAKRPCEKLTARFYGPYRVTQRIGKVAYKLELPPEARVH 340
            D VFLK++PYRQ SL K+  EKL+ +F+GP+ VT+RIG VAYKL+LP  + +H
Sbjct: 2303 DMVFLKIRPYRQSSLRKKKNEKLSPKFFGPFEVTERIGLVAYKLQLPESSCIH 2355


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