BLASTX nr result

ID: Atractylodes22_contig00039782 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00039782
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding prot...   114   1e-23
ref|XP_004145734.1| PREDICTED: chlorophyll a-b binding protein, ...   109   3e-22
emb|CAJ77390.1| major chlorophyll a/b binding protein LHCb1.2 [S...   109   3e-22
sp|P27495.1|CB24_TOBAC RecName: Full=Chlorophyll a-b binding pro...   107   1e-21
gb|ABD38707.1| chloroplast chlorophyll a/b binding protein [Pach...   106   2e-21

>gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding protein [Carya
           cathayensis]
          Length = 267

 Score =  114 bits (284), Expect = 1e-23
 Identities = 54/63 (85%), Positives = 60/63 (95%)
 Frame = -3

Query: 191 MAASTMSLSSPSLAGQAVKVAPSTSALLGDGRVTMRKTAAKPKTVSSGSPWYGPDRVKYL 12
           MAASTM+LSSPSLAGQA+K+APS+S LLG+GRVTMRKTA +PK VSSGSPWYGPDRVKYL
Sbjct: 1   MAASTMALSSPSLAGQAIKLAPSSSDLLGEGRVTMRKTAGRPKPVSSGSPWYGPDRVKYL 60

Query: 11  GPF 3
           GPF
Sbjct: 61  GPF 63


>ref|XP_004145734.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
           [Cucumis sativus] gi|449525484|ref|XP_004169747.1|
           PREDICTED: chlorophyll a-b binding protein,
           chloroplastic-like [Cucumis sativus]
          Length = 267

 Score =  109 bits (272), Expect = 3e-22
 Identities = 51/63 (80%), Positives = 58/63 (92%)
 Frame = -3

Query: 191 MAASTMSLSSPSLAGQAVKVAPSTSALLGDGRVTMRKTAAKPKTVSSGSPWYGPDRVKYL 12
           MAAS+M+LSSPS AGQAVK++P+ S LLG+GR+TMRKTA KPK VSSGSPWYGPDRVKYL
Sbjct: 1   MAASSMALSSPSFAGQAVKLSPTASDLLGEGRITMRKTAGKPKPVSSGSPWYGPDRVKYL 60

Query: 11  GPF 3
           GPF
Sbjct: 61  GPF 63


>emb|CAJ77390.1| major chlorophyll a/b binding protein LHCb1.2 [Spinacia oleracea]
          Length = 267

 Score =  109 bits (272), Expect = 3e-22
 Identities = 50/63 (79%), Positives = 58/63 (92%)
 Frame = -3

Query: 191 MAASTMSLSSPSLAGQAVKVAPSTSALLGDGRVTMRKTAAKPKTVSSGSPWYGPDRVKYL 12
           MA+STM+LSSPSLAG+A+K+ P+ S +LG+GRVTMRKTA KPK VSSGSPWYGPDRVKYL
Sbjct: 1   MASSTMALSSPSLAGKAIKLGPTASEILGEGRVTMRKTAGKPKNVSSGSPWYGPDRVKYL 60

Query: 11  GPF 3
           GPF
Sbjct: 61  GPF 63


>sp|P27495.1|CB24_TOBAC RecName: Full=Chlorophyll a-b binding protein 40, chloroplastic;
           AltName: Full=LHCII type I CAB-40; Short=LHCP; Flags:
           Precursor gi|19829|emb|CAA36958.1| unnamed protein
           product [Nicotiana tabacum]
          Length = 267

 Score =  107 bits (266), Expect = 1e-21
 Identities = 50/63 (79%), Positives = 59/63 (93%)
 Frame = -3

Query: 191 MAASTMSLSSPSLAGQAVKVAPSTSALLGDGRVTMRKTAAKPKTVSSGSPWYGPDRVKYL 12
           MAASTM+LSSPS AG+AVK++PS+S + G+G+VTMRKTA+K KTVSSGSPWYGPDRVKYL
Sbjct: 1   MAASTMALSSPSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYL 60

Query: 11  GPF 3
           GPF
Sbjct: 61  GPF 63


>gb|ABD38707.1| chloroplast chlorophyll a/b binding protein [Pachysandra
           terminalis]
          Length = 267

 Score =  106 bits (265), Expect = 2e-21
 Identities = 51/63 (80%), Positives = 57/63 (90%)
 Frame = -3

Query: 191 MAASTMSLSSPSLAGQAVKVAPSTSALLGDGRVTMRKTAAKPKTVSSGSPWYGPDRVKYL 12
           MA+STM+LSSPSLAG+AVK+APS S LLG GRV+MRKT  +PK VSSGSPWYGPDRVKYL
Sbjct: 1   MASSTMALSSPSLAGKAVKLAPSASELLGVGRVSMRKTGGRPKPVSSGSPWYGPDRVKYL 60

Query: 11  GPF 3
           GPF
Sbjct: 61  GPF 63


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