BLASTX nr result

ID: Atractylodes22_contig00039697 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00039697
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812...   135   5e-30
ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808...   125   3e-27
ref|XP_003636545.1| Pentatricopeptide repeat-containing protein ...   121   7e-26
gb|ABN08404.1| Retrotransposon gag protein [Medicago truncatula]...   117   7e-25
gb|ADN34034.1| gypsy/ty3 element polyprotein [Cucumis melo subsp...    73   2e-11

>ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812827 [Glycine max]
          Length = 572

 Score =  135 bits (339), Expect = 5e-30
 Identities = 66/133 (49%), Positives = 97/133 (72%), Gaps = 8/133 (6%)
 Frame = +3

Query: 3   TMQGNMQRALEEF------RETMLNELTRLLDRR--PVEQPVNRAEDRLAEYRMAVKKVE 158
           T  GN+   L+E       +  +L EL++ +++R    E+  +  +   +E R+A KKV+
Sbjct: 16  TQMGNVTTTLQELALQVQQQSLILAELSKQIEKRRDTSEEGASAGDSAQSESRLAGKKVK 75

Query: 159 LPMFNGEDPVGWITRAEIYFEVQNTPEEIKVKLAKLSMEGTTIHWFNLLSATEENLTWED 338
           LP+F+G+DPV WITRAEIYF+VQ+T ++++VKLA+LSMEG+TIHWFNLL  TE+ L+WE+
Sbjct: 76  LPLFDGDDPVAWITRAEIYFDVQDTSDDMRVKLARLSMEGSTIHWFNLLMETEDELSWEN 135

Query: 339 FKQALIERYGGRQ 377
            K+ALI RYGGR+
Sbjct: 136 LKRALIARYGGRR 148


>ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808652 [Glycine max]
          Length = 463

 Score =  125 bits (315), Expect = 3e-27
 Identities = 63/130 (48%), Positives = 91/130 (70%), Gaps = 8/130 (6%)
 Frame = +3

Query: 12  GNMQRALEEFRETM------LNELTRLLDRRPVEQPVNRA--EDRLAEYRMAVKKVELPM 167
           G++Q  L+   + M      ++EL++ + ++ V Q    +  E    E R++ KKV+LP+
Sbjct: 2   GDVQATLQSLAQQMQQQSLIMSELSKQIAQKGVNQESENSVGESSQEESRLSGKKVKLPL 61

Query: 168 FNGEDPVGWITRAEIYFEVQNTPEEIKVKLAKLSMEGTTIHWFNLLSATEENLTWEDFKQ 347
           F G+D V WITR EIYF+VQNT ++++VKLA+LSMEG+TIHWFNLL  TE+ L+WE  K+
Sbjct: 62  FEGDDLVAWITRVEIYFDVQNTTDKMRVKLARLSMEGSTIHWFNLLMETEDELSWEKLKR 121

Query: 348 ALIERYGGRQ 377
           ALI RYGGR+
Sbjct: 122 ALIARYGGRR 131


>ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355502480|gb|AES83683.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score =  121 bits (303), Expect = 7e-26
 Identities = 61/115 (53%), Positives = 86/115 (74%), Gaps = 3/115 (2%)
 Frame = +3

Query: 42   RETMLNELTRLLDRRPVEQPVNR---AEDRLAEYRMAVKKVELPMFNGEDPVGWITRAEI 212
            +  ++ E+T+ L+ +  + P+ R    E    E R+A KKV+LP+F G+DPV WITRAEI
Sbjct: 709  QSVLMAEVTKQLELQ--KTPLVREEYVESSQNESRLAGKKVKLPLFEGDDPVAWITRAEI 766

Query: 213  YFEVQNTPEEIKVKLAKLSMEGTTIHWFNLLSATEENLTWEDFKQALIERYGGRQ 377
            YF+VQNTP++++VKL++LSMEG TIHWFNLL  TE++L+ E  K+ALI RY GR+
Sbjct: 767  YFDVQNTPDDMRVKLSRLSMEGPTIHWFNLLMETEDDLSREKLKKALIARYDGRR 821


>gb|ABN08404.1| Retrotransposon gag protein [Medicago truncatula]
           gi|124360393|gb|ABN08406.1| Retrotransposon gag protein
           [Medicago truncatula]
          Length = 224

 Score =  117 bits (294), Expect = 7e-25
 Identities = 55/86 (63%), Positives = 66/86 (76%)
 Frame = +3

Query: 114 EDRLAEYRMAVKKVELPMFNGEDPVGWITRAEIYFEVQNTPEEIKVKLAKLSMEGTTIHW 293
           ++ L E+R++VKKVEL MFNG+DP GWI RAE+YF VQNT  EIKV LA+L M+G TIH+
Sbjct: 71  DEALDEFRLSVKKVELLMFNGDDPAGWIARAEVYFNVQNTTPEIKVNLAQLCMDGPTIHF 130

Query: 294 FNLLSATEENLTWEDFKQALIERYGG 371
           F  L    E LTWED K AL+ERYGG
Sbjct: 131 FKGLLEENETLTWEDLKDALLERYGG 156


>gb|ADN34034.1| gypsy/ty3 element polyprotein [Cucumis melo subsp. melo]
          Length = 473

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 32/81 (39%), Positives = 52/81 (64%)
 Frame = +3

Query: 135 RMAVKKVELPMFNGEDPVGWITRAEIYFEVQNTPEEIKVKLAKLSMEGTTIHWFNLLSAT 314
           R+  KK+E+P+FNGEDP GWI +AE YF++    E+ K+K+A +SMEG  + WF      
Sbjct: 93  RIKFKKLEMPVFNGEDPDGWIYKAEYYFQMHLLNEQEKLKIAIVSMEGKGLCWFRWAENR 152

Query: 315 EENLTWEDFKQALIERYGGRQ 377
           +   +W++ K+ +  R+  R+
Sbjct: 153 KRFRSWKELKERMYNRFCNRE 173


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