BLASTX nr result
ID: Atractylodes22_contig00039666
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes22_contig00039666
(447 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containi... 183 1e-44
ref|XP_002536106.1| pentatricopeptide repeat-containing protein,... 181 4e-44
emb|CBI21484.3| unnamed protein product [Vitis vinifera] 179 2e-43
ref|XP_002310592.1| predicted protein [Populus trichocarpa] gi|2... 172 2e-41
ref|NP_179798.1| pentatricopeptide repeat-containing protein [Ar... 171 6e-41
>ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 785
Score = 183 bits (464), Expect = 1e-44
Identities = 95/148 (64%), Positives = 112/148 (75%)
Frame = -3
Query: 445 ARQIFDSLRDRDVVAWTAMIVGYMQNGFNNEAMNLFRSMINGGPEPNSYTXXXXXXXXXX 266
AR+IFDSLR RDVVAWTAMIVGY+QNGFN +AM LFRSMI GP+PN+YT
Sbjct: 365 ARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSS 424
Query: 265 XXXLDHGKQIHARAIKSEAAPSVSVSNALINMYAKSGSISNAQRVFKLISRLKDTVTWTS 86
LDHG+QIHA A +S A SVSVSNALI MYAKSGSI++A+ VF LI +DT+TWTS
Sbjct: 425 LASLDHGRQIHASATRSGNASSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTS 484
Query: 85 MVISFAQHGHGAESLELFEKMLSFDIRP 2
M+I+ AQHG G E+L LFE+ML I+P
Sbjct: 485 MIIALAQHGLGEEALTLFERMLENGIKP 512
Score = 96.3 bits (238), Expect = 2e-18
Identities = 56/177 (31%), Positives = 92/177 (51%), Gaps = 33/177 (18%)
Frame = -3
Query: 433 FDSLRDRDVVAWTAMIVGYMQNGFNNEAMNLFRSMI-NGGPEPNSYTXXXXXXXXXXXXX 257
F+ + +RDVV+W AMI GY Q+GF+ EA+++F M+ + +P+ +T
Sbjct: 234 FEQMIERDVVSWNAMISGYNQHGFDREALDIFSKMLMDSSSKPDKFTLASALSACANLEN 293
Query: 256 LDHGKQIHARAIKSEAAPSVSVSNALINMYAKSGSISNAQRVFK--LIS----------- 116
L GKQIHA I++E +V NALI+MY+KSG + AQ++ + +IS
Sbjct: 294 LKLGKQIHAHIIRTEFDTFGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALL 353
Query: 115 -------------------RLKDTVTWTSMVISFAQHGHGAESLELFEKMLSFDIRP 2
R++D V WT+M++ + Q+G +++ELF M+ +P
Sbjct: 354 DGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKP 410
Score = 89.4 bits (220), Expect = 3e-16
Identities = 50/146 (34%), Positives = 81/146 (55%)
Frame = -3
Query: 445 ARQIFDSLRDRDVVAWTAMIVGYMQNGFNNEAMNLFRSMINGGPEPNSYTXXXXXXXXXX 266
A ++F+ + + D V+WTAMIVGY Q G A+ +FR M++ P +T
Sbjct: 98 AHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDVPPTQFTLTNVLASCAA 157
Query: 265 XXXLDHGKQIHARAIKSEAAPSVSVSNALINMYAKSGSISNAQRVFKLISRLKDTVTWTS 86
L G+++H+ +K + +SV+N+L+NMYAKSG A+ VF + +LK T +W +
Sbjct: 158 VECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRM-KLKSTSSWNT 216
Query: 85 MVISFAQHGHGAESLELFEKMLSFDI 8
M+ S Q G + FE+M+ D+
Sbjct: 217 MISSHMQSGLVDLAQVQFEQMIERDV 242
>ref|XP_002536106.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223520840|gb|EEF26277.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 519
Score = 181 bits (460), Expect = 4e-44
Identities = 93/148 (62%), Positives = 110/148 (74%)
Frame = -3
Query: 445 ARQIFDSLRDRDVVAWTAMIVGYMQNGFNNEAMNLFRSMINGGPEPNSYTXXXXXXXXXX 266
AR IFDSL+D DVVAWTAMIVGY+QNG N++AM LFR M GP PNS+T
Sbjct: 291 ARHIFDSLKDSDVVAWTAMIVGYVQNGLNDDAMELFRIMAKEGPRPNSFTLAAMLSVSSN 350
Query: 265 XXXLDHGKQIHARAIKSEAAPSVSVSNALINMYAKSGSISNAQRVFKLISRLKDTVTWTS 86
L+HGKQIHA AI+S SVSV NALI MYAK+GSI++AQ+VF LI R KDTV+WTS
Sbjct: 351 VASLNHGKQIHASAIRSGENLSVSVGNALITMYAKAGSITDAQQVFNLIQRNKDTVSWTS 410
Query: 85 MVISFAQHGHGAESLELFEKMLSFDIRP 2
M+I+ QHG G ES+ELFEKML+ I+P
Sbjct: 411 MIIALGQHGLGQESIELFEKMLALGIKP 438
Score = 95.5 bits (236), Expect = 4e-18
Identities = 61/178 (34%), Positives = 86/178 (48%), Gaps = 30/178 (16%)
Frame = -3
Query: 445 ARQIFDSLRDRDVVAWTAMIVGYMQNGFNNEAMNLFRSMINGGPEPNSYTXXXXXXXXXX 266
A +FD + DRD V+WT MIVGY Q G A+ +F +M+ P +T
Sbjct: 25 AHSVFDEIPDRDSVSWTTMIVGYNQMGRFESAIKMFVAMMKDKVLPTQFTVTNVFASCAA 84
Query: 265 XXXLDHGKQIHARAIKSEAAPSVSVSNALINMYAKSGSISNAQRVFK------------L 122
LD GK+IH+ IK + V V+N+L+NMYAK+G A+ VF +
Sbjct: 85 LGALDIGKKIHSFVIKLGLSGCVPVANSLLNMYAKAGDSVMAKIVFDRMRLRSISSWNIM 144
Query: 121 IS------------------RLKDTVTWTSMVISFAQHGHGAESLELFEKMLSFDIRP 2
IS +D VTW SM+ ++QHG E+LELF +ML ++P
Sbjct: 145 ISLHMHGGRADLALAQFEQMSERDVVTWNSMITGYSQHGFDKEALELFSRMLEDSLKP 202
Score = 92.0 bits (227), Expect = 4e-17
Identities = 56/176 (31%), Positives = 86/176 (48%), Gaps = 32/176 (18%)
Frame = -3
Query: 433 FDSLRDRDVVAWTAMIVGYMQNGFNNEAMNLFRSMINGGPEPNSYTXXXXXXXXXXXXXL 254
F+ + +RDVV W +MI GY Q+GF+ EA+ LF M+ +P+ +T L
Sbjct: 161 FEQMSERDVVTWNSMITGYSQHGFDKEALELFSRMLEDSLKPDRFTLASILSACANIENL 220
Query: 253 DHGKQIHARAIKSEAAPSVSVSNALINMYAKSGSISNAQRVFK----------------- 125
+ GKQIH+ I++E S V NALI+MYAK+G + AQ + +
Sbjct: 221 NLGKQIHSYIIRTEFDISGVVQNALISMYAKTGGVEIAQSIVEQSGISDLNVIAFTALLD 280
Query: 124 -------------LISRLKDT--VTWTSMVISFAQHGHGAESLELFEKMLSFDIRP 2
+ LKD+ V WT+M++ + Q+G +++ELF M RP
Sbjct: 281 GYVKLGNITPARHIFDSLKDSDVVAWTAMIVGYVQNGLNDDAMELFRIMAKEGPRP 336
>emb|CBI21484.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 179 bits (455), Expect = 2e-43
Identities = 93/142 (65%), Positives = 109/142 (76%)
Frame = -3
Query: 445 ARQIFDSLRDRDVVAWTAMIVGYMQNGFNNEAMNLFRSMINGGPEPNSYTXXXXXXXXXX 266
AR+IFDSLR RDVVAWTAMIVGY+QNGFN +AM LFRSMI GP+PN+YT
Sbjct: 230 ARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSS 289
Query: 265 XXXLDHGKQIHARAIKSEAAPSVSVSNALINMYAKSGSISNAQRVFKLISRLKDTVTWTS 86
LDHG+QIHA A +S A SVSVSNALI MYAKSGSI++A+ VF LI +DT+TWTS
Sbjct: 290 LASLDHGRQIHASATRSGNASSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTS 349
Query: 85 MVISFAQHGHGAESLELFEKML 20
M+I+ AQHG G E+L LFE+ML
Sbjct: 350 MIIALAQHGLGEEALTLFERML 371
Score = 92.4 bits (228), Expect = 3e-17
Identities = 52/179 (29%), Positives = 89/179 (49%), Gaps = 31/179 (17%)
Frame = -3
Query: 445 ARQIFDSLRDRDVVAWTAMIVGYMQNGFNNEAMNLFRSMINGGPEPNSYTXXXXXXXXXX 266
A ++F+ + + D V+WTAMIVGY Q G A+ +FR M++ P +T
Sbjct: 98 AHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDVPPTQFTLTNVLASCAA 157
Query: 265 XXXLDHGKQIHARAIKSEAAPSVSVSNALINMYAKS------------------------ 158
L G+++H+ +K + +SV+N+L+NMYAKS
Sbjct: 158 VECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMKLKSTSTFTAL 217
Query: 157 -------GSISNAQRVFKLISRLKDTVTWTSMVISFAQHGHGAESLELFEKMLSFDIRP 2
G I+ A+R+F + R++D V WT+M++ + Q+G +++ELF M+ +P
Sbjct: 218 LDGYVKLGDINPARRIFDSL-RVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKP 275
>ref|XP_002310592.1| predicted protein [Populus trichocarpa] gi|222853495|gb|EEE91042.1|
predicted protein [Populus trichocarpa]
Length = 747
Score = 172 bits (437), Expect = 2e-41
Identities = 84/148 (56%), Positives = 113/148 (76%)
Frame = -3
Query: 445 ARQIFDSLRDRDVVAWTAMIVGYMQNGFNNEAMNLFRSMINGGPEPNSYTXXXXXXXXXX 266
ARQIF+SL+D DVVAWTAMIVGY+QNG NN+A+ +F++M++ GP PNS+T
Sbjct: 327 ARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSS 386
Query: 265 XXXLDHGKQIHARAIKSEAAPSVSVSNALINMYAKSGSISNAQRVFKLISRLKDTVTWTS 86
L+HGKQIHA AI+S A S SV NAL MYAK+GSI+ A++VF L+ + +DTV+WTS
Sbjct: 387 VTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSINGARKVFNLLRQNRDTVSWTS 446
Query: 85 MVISFAQHGHGAESLELFEKMLSFDIRP 2
M+++ AQHG G E++ELFE+ML+ I+P
Sbjct: 447 MIMALAQHGLGEEAIELFEQMLTLGIKP 474
Score = 86.7 bits (213), Expect = 2e-15
Identities = 53/177 (29%), Positives = 90/177 (50%), Gaps = 33/177 (18%)
Frame = -3
Query: 433 FDSLRDRDVVAWTAMIVGYMQNGFNNEAMNLFRSMI-NGGPEPNSYTXXXXXXXXXXXXX 257
F+ L +RD+V+W +MI G Q+GF+NEA+ F S++ + +P+ ++
Sbjct: 196 FELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASALSACANLEK 255
Query: 256 LDHGKQIHARAIKSEAAPSVSVSNALINMYAKSGSISNAQRVF----------------- 128
L GKQIH +++ S +V NALI+MYAKSG + A+R+
Sbjct: 256 LSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGISDLDVIAFTALL 315
Query: 127 -------------KLISRLK--DTVTWTSMVISFAQHGHGAESLELFEKMLSFDIRP 2
++ + LK D V WT+M++ + Q+G +++E+F+ M+S RP
Sbjct: 316 NGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRP 372
Score = 79.3 bits (194), Expect = 3e-13
Identities = 47/146 (32%), Positives = 75/146 (51%)
Frame = -3
Query: 445 ARQIFDSLRDRDVVAWTAMIVGYMQNGFNNEAMNLFRSMINGGPEPNSYTXXXXXXXXXX 266
A Q+FD + RD V+WT +IVGY Q G +A+ +F M+ P +T
Sbjct: 60 AHQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAA 119
Query: 265 XXXLDHGKQIHARAIKSEAAPSVSVSNALINMYAKSGSISNAQRVFKLISRLKDTVTWTS 86
GK++H+ +K V V+N+L+NMYAK+G + A+ VF + +L++T +W +
Sbjct: 120 TGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRM-KLRNTSSWNA 178
Query: 85 MVISFAQHGHGAESLELFEKMLSFDI 8
M+ G +L FE + DI
Sbjct: 179 MISLHMNCGRVDLALAQFELLSERDI 204
>ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g22070 gi|4587589|gb|AAD25817.1| hypothetical protein
[Arabidopsis thaliana] gi|330252165|gb|AEC07259.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 786
Score = 171 bits (433), Expect = 6e-41
Identities = 89/148 (60%), Positives = 105/148 (70%)
Frame = -3
Query: 445 ARQIFDSLRDRDVVAWTAMIVGYMQNGFNNEAMNLFRSMINGGPEPNSYTXXXXXXXXXX 266
A+ IF SL+DRDVVAWTAMIVGY Q+G EA+NLFRSM+ GG PNSYT
Sbjct: 366 AKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASS 425
Query: 265 XXXLDHGKQIHARAIKSEAAPSVSVSNALINMYAKSGSISNAQRVFKLISRLKDTVTWTS 86
L HGKQIH A+KS SVSVSNALI MYAK+G+I++A R F LI +DTV+WTS
Sbjct: 426 LASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTS 485
Query: 85 MVISFAQHGHGAESLELFEKMLSFDIRP 2
M+I+ AQHGH E+LELFE ML +RP
Sbjct: 486 MIIALAQHGHAEEALELFETMLMEGLRP 513
Score = 87.0 bits (214), Expect = 1e-15
Identities = 54/170 (31%), Positives = 81/170 (47%), Gaps = 30/170 (17%)
Frame = -3
Query: 439 QIFDSLRDRDVVAWTAMIVGYMQNGFNNEAMNLFRSMINGGPEPNSYTXXXXXXXXXXXX 260
+ FD L RD V+WT MIVGY G ++A+ + M+ G EP +T
Sbjct: 101 EFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATR 160
Query: 259 XLDHGKQIHARAIKSEAAPSVSVSNALINMYAKSGSISNAQRVF-KLISR---------- 113
++ GK++H+ +K +VSVSN+L+NMYAK G A+ VF +++ R
Sbjct: 161 CMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIA 220
Query: 112 -------------------LKDTVTWTSMVISFAQHGHGAESLELFEKML 20
+D VTW SM+ F Q G+ +L++F KML
Sbjct: 221 LHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKML 270
Score = 74.7 bits (182), Expect = 7e-12
Identities = 46/177 (25%), Positives = 80/177 (45%), Gaps = 33/177 (18%)
Frame = -3
Query: 433 FDSLRDRDVVAWTAMIVGYMQNGFNNEAMNLFRSMINGG-PEPNSYTXXXXXXXXXXXXX 257
F+ + +RD+V W +MI G+ Q G++ A+++F M+ P+ +T
Sbjct: 235 FEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEK 294
Query: 256 LDHGKQIHARAIKSEAAPSVSVSNALINMYAKSGSISNAQRVFK---------------- 125
L GKQIH+ + + S V NALI+MY++ G + A+R+ +
Sbjct: 295 LCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALL 354
Query: 124 ----------------LISRLKDTVTWTSMVISFAQHGHGAESLELFEKMLSFDIRP 2
+ + +D V WT+M++ + QHG E++ LF M+ RP
Sbjct: 355 DGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRP 411
Score = 57.8 bits (138), Expect = 9e-07
Identities = 34/130 (26%), Positives = 64/130 (49%), Gaps = 2/130 (1%)
Frame = -3
Query: 445 ARQIFDSLR-DRDVVAWTAMIVGYMQNGFNNEAMNLFRSMINGGPEPNSYTXXXXXXXXX 269
A + FD +R +RD V+WT+MI+ Q+G EA+ LF +M+ G P+ T
Sbjct: 467 ASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACT 526
Query: 268 XXXXLDHGKQ-IHARAIKSEAAPSVSVSNALINMYAKSGSISNAQRVFKLISRLKDTVTW 92
++ G+Q + P++S +++++ ++G + AQ + + D VTW
Sbjct: 527 HAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTW 586
Query: 91 TSMVISFAQH 62
S++ + H
Sbjct: 587 GSLLSACRVH 596