BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00039525
         (377 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...    58   7e-07
ref|XP_003636545.1| Pentatricopeptide repeat-containing protein ...    57   2e-06

>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
           finger, CCHC-type; Peptidase aspartic, active site;
           Polynucleotidyl transferase, Ribonuclease H fold
           [Medicago truncatula]
          Length = 1297

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 33/85 (38%), Positives = 47/85 (55%)
 Frame = -2

Query: 265 PRNRGSWTLSRSEWEDRRRKGLCFKCGQQFGPSHKCPEANLRVIXXXXXXXXXXEGNHQL 86
           PR+R    LS +E  +R++KGLCFKCG  F P H+CP+  LRV+          EG    
Sbjct: 91  PRDRSFTHLSYNELMERKQKGLCFKCGGPFHPMHQCPDKQLRVLVLEEDEEGEPEGKLLA 150

Query: 85  LETDKSESLPEDSKGDTGECLVIEF 11
           +E D      ++ +GD GE  ++EF
Sbjct: 151 VEVD------DEEEGD-GEMCMMEF 168


>ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355502480|gb|AES83683.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 35/89 (39%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
 Frame = -2

Query: 268  IPRNRGSWTLSRSEWEDRRRKGLCFKCGQQFGPS-HKCPEANLRVIXXXXXXXXXXEGNH 92
            + R +G  ++   E  +RR KGLCFKCG ++ P+ HKCPE +LRV+          EG  
Sbjct: 918  VERWKGVRSIQNGEMAERRAKGLCFKCGGKYHPTLHKCPEKSLRVLILGEGEGVNEEGEI 977

Query: 91   QLLETDKSESLPEDSKGDTGECLVIEFQG 5
              LET   E L E+ +    EC VI   G
Sbjct: 978  VSLET--QEVLEEEEEEIESECKVIGVLG 1004