BLASTX nr result

ID: Atractylodes22_contig00039515 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00039515
         (244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004160885.1| PREDICTED: pentatricopeptide repeat-containi...    69   4e-10
ref|XP_004148164.1| PREDICTED: pentatricopeptide repeat-containi...    69   4e-10
ref|XP_002518060.1| pentatricopeptide repeat-containing protein,...    67   1e-09
ref|XP_002268526.2| PREDICTED: pentatricopeptide repeat-containi...    65   7e-09
ref|XP_002312829.1| predicted protein [Populus trichocarpa] gi|2...    63   3e-08

>ref|XP_004160885.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g62370-like [Cucumis sativus]
          Length = 693

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 38/81 (46%), Positives = 53/81 (65%)
 Frame = -2

Query: 243 TTPLPLSDHSTAPSFSAVSPCEEGHKSLCFSLAENLIKRGLLSSARRVIQRLIVQSPTII 64
           T  +PL D  T  SFS+ S     HK+LCFSL E LI+RG    A++VIQR++ QS +I 
Sbjct: 9   TCTVPL-DPPTTSSFSSASE----HKNLCFSLVEQLIRRGFFFQAQQVIQRIVTQSSSIS 63

Query: 63  DEIFVIDFAVVHGVELDLTTY 1
           + I +++FA   G+ELDL T+
Sbjct: 64  EAISIVNFAAEWGLELDLATH 84


>ref|XP_004148164.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g62370-like [Cucumis sativus]
          Length = 693

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 38/81 (46%), Positives = 53/81 (65%)
 Frame = -2

Query: 243 TTPLPLSDHSTAPSFSAVSPCEEGHKSLCFSLAENLIKRGLLSSARRVIQRLIVQSPTII 64
           T  +PL D  T  SFS+ S     HK+LCFSL E LI+RG    A++VIQR++ QS +I 
Sbjct: 9   TCTVPL-DPPTTSSFSSASE----HKNLCFSLVEQLIRRGFFFQAQQVIQRIVTQSSSIS 63

Query: 63  DEIFVIDFAVVHGVELDLTTY 1
           + I +++FA   G+ELDL T+
Sbjct: 64  EAISIVNFAAEWGLELDLATH 84


>ref|XP_002518060.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542656|gb|EEF44193.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 402

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 30/58 (51%), Positives = 41/58 (70%)
 Frame = -2

Query: 174 GHKSLCFSLAENLIKRGLLSSARRVIQRLIVQSPTIIDEIFVIDFAVVHGVELDLTTY 1
           GHK+LCFSLAENL +RG L+SA+ +IQR++  S T+ D I  +DFA   G+ L +  Y
Sbjct: 40  GHKTLCFSLAENLFRRGRLASAQEIIQRIVTDSSTVPDAISTVDFAASRGINLSVGIY 97


>ref|XP_002268526.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g62370-like [Vitis vinifera]
          Length = 1101

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 28/63 (44%), Positives = 43/63 (68%)
 Frame = -2

Query: 189 SPCEEGHKSLCFSLAENLIKRGLLSSARRVIQRLIVQSPTIIDEIFVIDFAVVHGVELDL 10
           +P  E H  LCF+L + LI+RG+LS  ++V++R+I QSP++ D I  ++FA   G+ELD 
Sbjct: 33  APTTEHHNKLCFTLTDRLIRRGVLSLGQQVVRRMIKQSPSVSDAILAVEFAAARGLELDS 92

Query: 9   TTY 1
             Y
Sbjct: 93  CGY 95


>ref|XP_002312829.1| predicted protein [Populus trichocarpa] gi|222849237|gb|EEE86784.1|
           predicted protein [Populus trichocarpa]
          Length = 734

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 31/59 (52%), Positives = 40/59 (67%)
 Frame = -2

Query: 186 PCEEGHKSLCFSLAENLIKRGLLSSARRVIQRLIVQSPTIIDEIFVIDFAVVHGVELDL 10
           P    H SLC SL  +L++RGLLSSA++VIQR I  SPT+ D +  I+FA   GV+L L
Sbjct: 32  PISNDHTSLCQSLVHDLLRRGLLSSAQQVIQRFIASSPTVPDALSAIEFASASGVDLGL 90


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