BLASTX nr result

ID: Atractylodes22_contig00039497 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00039497
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAL79340.1|AC099402_4 Putative 22 kDa kafirin cluster; Ty3-Gy...   131   6e-29
gb|ABN08587.1| Polynucleotidyl transferase, Ribonuclease H fold ...   130   1e-28
gb|AAQ56285.1| putative gag-pol protein [Oryza sativa Japonica G...   129   2e-28
gb|ABI34339.1| Polyprotein, 3'-partial, putative [Solanum demissum]   129   3e-28
emb|CAN61139.1| hypothetical protein VITISV_009489 [Vitis vinifera]   128   4e-28

>gb|AAL79340.1|AC099402_4 Putative 22 kDa kafirin cluster; Ty3-Gypsy type [Oryza sativa]
            gi|21327374|gb|AAM48279.1|AC122148_32 Putative 22 kDa
            kafirin cluster; Ty3-Gypsy type [Oryza sativa Japonica
            Group] gi|31431495|gb|AAP53268.1| retrotransposon
            protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1230

 Score =  131 bits (329), Expect = 6e-29
 Identities = 60/90 (66%), Positives = 73/90 (81%)
 Frame = -1

Query: 270  PRGNDTIWVVVDRLTKSAHFLAIKESEKLENLAKLYIREVVSRHGVPLSIVSDRDSRFAS 91
            P GND+IWV+VDRLTKS HFL +K +  L+ LAKLY++E+VS HGVP+ IVSDRD+RF S
Sbjct: 878  PAGNDSIWVIVDRLTKSTHFLPVKRNFSLKKLAKLYVKEIVSLHGVPVRIVSDRDTRFLS 937

Query: 90   HFWTSLQRELGSKVHMSTAYHPQTDGQSER 1
             FW SL R  G+K+  STAYHPQTDGQ+ER
Sbjct: 938  KFWKSLHRAPGTKLDFSTAYHPQTDGQTER 967


>gb|ABN08587.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 482

 Score =  130 bits (326), Expect = 1e-28
 Identities = 62/90 (68%), Positives = 71/90 (78%)
 Frame = -1

Query: 270 PRGNDTIWVVVDRLTKSAHFLAIKESEKLENLAKLYIREVVSRHGVPLSIVSDRDSRFAS 91
           P GND IWV+VDRLTKSAHFL I  S  +  LA++YI+E+V  HGVP SIVSDRD RF S
Sbjct: 333 PAGNDAIWVIVDRLTKSAHFLPINISFPVAQLAEIYIKEIVRLHGVPSSIVSDRDPRFTS 392

Query: 90  HFWTSLQRELGSKVHMSTAYHPQTDGQSER 1
            FW SLQ  LGSK+ +S+AYHPQTDGQSER
Sbjct: 393 RFWKSLQEALGSKLRLSSAYHPQTDGQSER 422


>gb|AAQ56285.1| putative gag-pol protein [Oryza sativa Japonica Group]
          Length = 552

 Score =  129 bits (324), Expect = 2e-28
 Identities = 60/90 (66%), Positives = 72/90 (80%)
 Frame = -1

Query: 270 PRGNDTIWVVVDRLTKSAHFLAIKESEKLENLAKLYIREVVSRHGVPLSIVSDRDSRFAS 91
           PRG D IWVVVDRLTKSAHF+ ++ +    +LA LYI+EVV  HGVP SIVSDRDS+F S
Sbjct: 211 PRGKDAIWVVVDRLTKSAHFIPVRTTNTAHDLAPLYIKEVVRLHGVPKSIVSDRDSKFVS 270

Query: 90  HFWTSLQRELGSKVHMSTAYHPQTDGQSER 1
             W SLQR +G+K+ +STA+HPQTDGQSER
Sbjct: 271 MLWQSLQRAMGTKISLSTAFHPQTDGQSER 300


>gb|ABI34339.1| Polyprotein, 3'-partial, putative [Solanum demissum]
          Length = 1475

 Score =  129 bits (323), Expect = 3e-28
 Identities = 60/90 (66%), Positives = 75/90 (83%)
 Frame = -1

Query: 270  PRGNDTIWVVVDRLTKSAHFLAIKESEKLENLAKLYIREVVSRHGVPLSIVSDRDSRFAS 91
            PRG D+IWV+VDRLTKSAHFL ++ S   E LA++YIREVV  HGVP+SI+SDR S+F S
Sbjct: 1275 PRGVDSIWVIVDRLTKSAHFLPVQCSFSAERLARIYIREVVRLHGVPVSIISDRGSQFTS 1334

Query: 90   HFWTSLQRELGSKVHMSTAYHPQTDGQSER 1
            +FW + Q ELG++V +STA+HPQTDGQSER
Sbjct: 1335 NFWRTFQDELGTRVDLSTAFHPQTDGQSER 1364


>emb|CAN61139.1| hypothetical protein VITISV_009489 [Vitis vinifera]
          Length = 984

 Score =  128 bits (322), Expect = 4e-28
 Identities = 59/88 (67%), Positives = 72/88 (81%)
 Frame = -1

Query: 264 GNDTIWVVVDRLTKSAHFLAIKESEKLENLAKLYIREVVSRHGVPLSIVSDRDSRFASHF 85
           GN+ IWV+VDRLTKSAHFL +K +  L+ LA LY++E+V  HGVP+SIVSDRD RF S F
Sbjct: 642 GNNAIWVIVDRLTKSAHFLPMKVNFSLDRLASLYVKEIVRMHGVPVSIVSDRDPRFTSRF 701

Query: 84  WTSLQRELGSKVHMSTAYHPQTDGQSER 1
           W SLQ+ LG+K+  STA+HPQTDGQSER
Sbjct: 702 WHSLQKSLGTKLSFSTAFHPQTDGQSER 729


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