BLASTX nr result

ID: Atractylodes22_contig00039464 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00039464
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547448.1| PREDICTED: pentatricopeptide repeat-containi...   149   2e-34
ref|XP_002518234.1| pentatricopeptide repeat-containing protein,...   146   2e-33
gb|ABD28636.1| Tetratricopeptide-like helical [Medicago truncatula]   140   1e-31
ref|XP_003595043.1| Pentatricopeptide repeat-containing protein ...   140   1e-31
ref|XP_003634559.1| PREDICTED: pentatricopeptide repeat-containi...   133   2e-29

>ref|XP_003547448.1| PREDICTED: pentatricopeptide repeat-containing protein At5g57250,
           mitochondrial-like [Glycine max]
          Length = 1064

 Score =  149 bits (376), Expect = 2e-34
 Identities = 70/110 (63%), Positives = 86/110 (78%)
 Frame = -1

Query: 342 IKSLFLVGLFEDAYDLYKGMPEMGLAANHVTYCTLIDGYCKFGRIESALEVFDEFRRTLM 163
           I++LF++G FED Y LYKGMPEM L  N VTYCT+IDGYCK GRIE ALEVFDEFR+TL+
Sbjct: 442 IRALFMMGAFEDVYALYKGMPEMDLIPNSVTYCTMIDGYCKVGRIEEALEVFDEFRKTLI 501

Query: 162 ASAACYNCIINGLCKNDMIDMAIQVFIELIGRGMPLDPGIYRNLLQSILK 13
           +S ACYN IINGLCKN M +MAI+  +EL   G+ LD G +R L ++I +
Sbjct: 502 SSLACYNSIINGLCKNGMTEMAIEALLELNHEGLELDIGTFRMLTKTIFE 551


>ref|XP_002518234.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542581|gb|EEF44120.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 932

 Score =  146 bits (369), Expect = 2e-33
 Identities = 66/110 (60%), Positives = 86/110 (78%)
 Frame = -1

Query: 342 IKSLFLVGLFEDAYDLYKGMPEMGLAANHVTYCTLIDGYCKFGRIESALEVFDEFRRTLM 163
           +K+LF+VG FED   LY GM EM L AN +TYCT+I G+CK GRI+ ALE+FDEFR  L 
Sbjct: 467 LKALFVVGAFEDVLVLYNGMQEMNLVANSITYCTIIGGFCKVGRIDEALEIFDEFRHGLG 526

Query: 162 ASAACYNCIINGLCKNDMIDMAIQVFIELIGRGMPLDPGIYRNLLQSILK 13
           +S ACYNC+INGLCKN M+DMA ++F+ELI +G+ LD GI   L+++I+K
Sbjct: 527 SSVACYNCMINGLCKNGMVDMAAEIFVELIEKGLTLDIGICMTLIKAIVK 576


>gb|ABD28636.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 1053

 Score =  140 bits (353), Expect = 1e-31
 Identities = 63/110 (57%), Positives = 85/110 (77%)
 Frame = -1

Query: 342 IKSLFLVGLFEDAYDLYKGMPEMGLAANHVTYCTLIDGYCKFGRIESALEVFDEFRRTLM 163
           I++LF++  +ED Y LYKGMPEM L  N +TYCT+IDGYCK G+I  ALEVFD+FR+T +
Sbjct: 428 IRALFMMQAYEDVYALYKGMPEMDLVPNSITYCTMIDGYCKVGKINEALEVFDDFRKTSI 487

Query: 162 ASAACYNCIINGLCKNDMIDMAIQVFIELIGRGMPLDPGIYRNLLQSILK 13
           +S ACYN IINGLCK  M++MAI+  +EL  +G+ LD G +R L+++I K
Sbjct: 488 SSYACYNSIINGLCKKGMVEMAIEALLELDHKGLMLDTGTHRLLMKTIFK 537


>ref|XP_003595043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355484091|gb|AES65294.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 1070

 Score =  140 bits (353), Expect = 1e-31
 Identities = 63/110 (57%), Positives = 85/110 (77%)
 Frame = -1

Query: 342 IKSLFLVGLFEDAYDLYKGMPEMGLAANHVTYCTLIDGYCKFGRIESALEVFDEFRRTLM 163
           I++LF++  +ED Y LYKGMPEM L  N +TYCT+IDGYCK G+I  ALEVFD+FR+T +
Sbjct: 445 IRALFMMQAYEDVYALYKGMPEMDLVPNSITYCTMIDGYCKVGKINEALEVFDDFRKTSI 504

Query: 162 ASAACYNCIINGLCKNDMIDMAIQVFIELIGRGMPLDPGIYRNLLQSILK 13
           +S ACYN IINGLCK  M++MAI+  +EL  +G+ LD G +R L+++I K
Sbjct: 505 SSYACYNSIINGLCKKGMVEMAIEALLELDHKGLMLDTGTHRLLMKTIFK 554


>ref|XP_003634559.1| PREDICTED: pentatricopeptide repeat-containing protein At5g57250,
           mitochondrial-like [Vitis vinifera]
          Length = 993

 Score =  133 bits (334), Expect = 2e-29
 Identities = 61/113 (53%), Positives = 83/113 (73%)
 Frame = -1

Query: 342 IKSLFLVGLFEDAYDLYKGMPEMGLAANHVTYCTLIDGYCKFGRIESALEVFDEFRRTLM 163
           IK+L +VG  EDAY  YKGM  M L A+ VTYCT+I+GYC+  RIE ALE+FDEFR+T +
Sbjct: 370 IKALLMVGALEDAYAFYKGMSGMDLVADSVTYCTMINGYCRVSRIEEALEIFDEFRKTSI 429

Query: 162 ASAACYNCIINGLCKNDMIDMAIQVFIELIGRGMPLDPGIYRNLLQSILKATG 4
           +S +CY C+I GLC+  M+DMAI+VFIEL  +G+ L  G Y +L+++  +  G
Sbjct: 430 SSVSCYKCMIYGLCRKGMVDMAIEVFIELNEKGLELVSGTYTSLIKASFEEQG 482



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 1/104 (0%)
 Frame = -1

Query: 321 GLFEDAYDLYKGMPEMGLAANHVTYCTLIDGYCKFGRIESALEVFDEF-RRTLMASAACY 145
           G  ++AY L+K +  +G+  +   Y TLIDG+C  G I+    + ++  +R +  S   Y
Sbjct: 242 GKLDEAYTLFKMVENLGIEVDEFMYVTLIDGFCTRGDIDCVFGLLEDMEKRGISPSIVTY 301

Query: 144 NCIINGLCKNDMIDMAIQVFIELIGRGMPLDPGIYRNLLQSILK 13
           N IINGLCK      A +V      +G+  D   +  LL   ++
Sbjct: 302 NSIINGLCKAGRTSEADEV-----SKGIAGDAVTFSTLLHGYIE 340


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