BLASTX nr result
ID: Atractylodes22_contig00039434
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atractylodes22_contig00039434 (378 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003547155.1| PREDICTED: zinc finger CCCH domain-containin... 58 7e-07 ref|XP_002329830.1| predicted protein [Populus trichocarpa] gi|2... 57 2e-06 ref|XP_003541728.1| PREDICTED: zinc finger CCCH domain-containin... 55 5e-06 >ref|XP_003547155.1| PREDICTED: zinc finger CCCH domain-containing protein 27-like [Glycine max] Length = 713 Score = 58.2 bits (139), Expect = 7e-07 Identities = 36/73 (49%), Positives = 43/73 (58%), Gaps = 5/73 (6%) Frame = +3 Query: 33 SPFSGSESEH--LYCNNDVPLLSTGFAKKISTYDWEPSKPFRSSFLL-SQGISSLGS--D 197 S FSGS E L ++ VP G+ KI +YDWEPS PFR SF + S +SS G D Sbjct: 416 STFSGSGREDFSLVSSSRVPSYPAGYKSKICSYDWEPSVPFRPSFFITSMNVSSPGDLYD 475 Query: 198 LIRDSIGQPKIGD 236 +RDSI P IGD Sbjct: 476 PLRDSIEIPNIGD 488 >ref|XP_002329830.1| predicted protein [Populus trichocarpa] gi|222870892|gb|EEF08023.1| predicted protein [Populus trichocarpa] Length = 669 Score = 57.0 bits (136), Expect = 2e-06 Identities = 46/126 (36%), Positives = 61/126 (48%), Gaps = 7/126 (5%) Frame = +3 Query: 15 TLRPNISPFSGSESEHLYCNNDVP---LLSTGFAKKISTYDWEPSKPFRSSFLLS-QGIS 182 +L + S FSGSE E L + VP L KIS+ DWEPS PFR SF ++ + IS Sbjct: 359 SLLQSASAFSGSEPESLSLAS-VPGDQLRHAEHKTKISSNDWEPSVPFRPSFFITPEMIS 417 Query: 183 SLGS--DLIRDSIGQPKIGDK-FXXXXXXXXXXXXXXXXXLINVDPPPTETFGMDYGSDR 353 S GS D +RDS P +GDK F I D FG ++ D+ Sbjct: 418 SAGSKYDPLRDSFVLPNVGDKSFKFSFFSLGASISNTSQQPIYGDSLSNRNFGTEFNGDK 477 Query: 354 LSLASH 371 +++SH Sbjct: 478 STISSH 483 >ref|XP_003541728.1| PREDICTED: zinc finger CCCH domain-containing protein 27-like [Glycine max] Length = 521 Score = 55.5 bits (132), Expect = 5e-06 Identities = 33/68 (48%), Positives = 39/68 (57%), Gaps = 3/68 (4%) Frame = +3 Query: 42 SGSESEHLYCNNDVPLLSTGFAKKISTYDWEPSKPFRSSFLL-SQGISSLGS--DLIRDS 212 SG E L + VP G+ KI +YDWEPS PFR SF + S +SS G D +RDS Sbjct: 411 SGREDFSLVNLSRVPSYPAGYKSKICSYDWEPSVPFRPSFFITSMNVSSPGDLYDPLRDS 470 Query: 213 IGQPKIGD 236 I P IGD Sbjct: 471 IEIPNIGD 478