BLASTX nr result
ID: Atractylodes22_contig00039411
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes22_contig00039411
(382 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas... 86 5e-29
gb|ABB47037.1| retrotransposon protein, putative, unclassified, ... 90 3e-28
gb|AAL82656.1|AC092387_4 retrotransposon protein, putative, uncl... 90 3e-28
emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera] 85 5e-28
ref|NP_001064331.1| Os10g0317000 [Oryza sativa Japonica Group] g... 86 5e-27
>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
finger, CCHC-type; Peptidase aspartic, active site;
Polynucleotidyl transferase, Ribonuclease H fold
[Medicago truncatula]
Length = 1297
Score = 85.5 bits (210), Expect(2) = 5e-29
Identities = 39/69 (56%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
Frame = +1
Query: 4 YLGHIISK-GVEMDQAKVQAMEKWHEPKTITELRVFLGLSGYYKKFVQDYGKIPAPLTEL 180
YLGH+ISK GV +D +KV ++ +W PK + +R FLGL+ YY+KF++DYGKI PLTEL
Sbjct: 580 YLGHLISKEGVAVDPSKVVSVTRWPIPKNVKGVRGFLGLTDYYRKFIKDYGKIAKPLTEL 639
Query: 181 LKKDQFIWS 207
KKD F+W+
Sbjct: 640 TKKDAFMWN 648
Score = 67.4 bits (163), Expect(2) = 5e-29
Identities = 31/55 (56%), Positives = 43/55 (78%)
Frame = +2
Query: 218 QEAFVALKRALSKAPVLWLPDFENDLVLETNASGYGLGAVLMQDEQPMAYFSQVL 382
Q+AF LKR L+ +PVL LPDF + V+E +ASG G+GA+LMQD +P+AY+S+ L
Sbjct: 652 QDAFDQLKRRLTTSPVLALPDFNKEFVIECDASGGGIGAILMQDRKPVAYYSKAL 706
>gb|ABB47037.1| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
Length = 1347
Score = 89.7 bits (221), Expect(2) = 3e-28
Identities = 40/69 (57%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Frame = +1
Query: 4 YLGHIISK-GVEMDQAKVQAMEKWHEPKTITELRVFLGLSGYYKKFVQDYGKIPAPLTEL 180
YLGHIIS+ G MD AK+QA+ +W P++ ELR FLGL+ YY+KF+QD+G + APLT+L
Sbjct: 614 YLGHIISQHGFAMDAAKIQAVAEWPRPRSPKELRGFLGLASYYRKFIQDFGSVAAPLTQL 673
Query: 181 LKKDQFIWS 207
L+KD F W+
Sbjct: 674 LRKDSFAWA 682
Score = 60.5 bits (145), Expect(2) = 3e-28
Identities = 33/64 (51%), Positives = 39/64 (60%)
Frame = +2
Query: 185 RKISLYGVLTAQEAFVALKRALSKAPVLWLPDFENDLVLETNASGYGLGAVLMQDEQPMA 364
RK S +AF LK AL+ PVL LPDF V+E +ASG G GAVL Q E P+A
Sbjct: 675 RKDSFAWAPATDDAFQRLKLALTTTPVLSLPDFNRPFVVECDASGTGFGAVLHQGEDPIA 734
Query: 365 YFSQ 376
YFS+
Sbjct: 735 YFSR 738
>gb|AAL82656.1|AC092387_4 retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group] gi|20270059|gb|AAM18147.1|AC092172_7
Putative gag-pol polyprotein [Oryza sativa Japonica
Group]
Length = 1338
Score = 89.7 bits (221), Expect(2) = 3e-28
Identities = 40/69 (57%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Frame = +1
Query: 4 YLGHIISK-GVEMDQAKVQAMEKWHEPKTITELRVFLGLSGYYKKFVQDYGKIPAPLTEL 180
YLGHIIS+ G MD AK+QA+ +W P++ ELR FLGL+ YY+KF+QD+G + APLT+L
Sbjct: 605 YLGHIISQHGFAMDAAKIQAVAEWPRPRSPKELRGFLGLASYYRKFIQDFGSVAAPLTQL 664
Query: 181 LKKDQFIWS 207
L+KD F W+
Sbjct: 665 LRKDSFAWA 673
Score = 60.5 bits (145), Expect(2) = 3e-28
Identities = 33/64 (51%), Positives = 39/64 (60%)
Frame = +2
Query: 185 RKISLYGVLTAQEAFVALKRALSKAPVLWLPDFENDLVLETNASGYGLGAVLMQDEQPMA 364
RK S +AF LK AL+ PVL LPDF V+E +ASG G GAVL Q E P+A
Sbjct: 666 RKDSFAWAPATDDAFQRLKLALTTTPVLSLPDFNRPFVVECDASGTGFGAVLHQGEDPIA 725
Query: 365 YFSQ 376
YFS+
Sbjct: 726 YFSR 729
>emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]
Length = 2232
Score = 84.7 bits (208), Expect(2) = 5e-28
Identities = 39/71 (54%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Frame = +1
Query: 4 YLGHIIS-KGVEMDQAKVQAMEKWHEPKTITELRVFLGLSGYYKKFVQDYGKIPAPLTEL 180
YLGH++S KGV D K+ AM +W PK++ ELR FLGL+GYY++FV+ YG I PLT+
Sbjct: 1437 YLGHLVSAKGVAADPNKISAMVEWPTPKSLKELRGFLGLTGYYRRFVEGYGAISWPLTQE 1496
Query: 181 LKKDQFIWSID 213
LKKD F W+++
Sbjct: 1497 LKKDAFNWNLE 1507
Score = 64.7 bits (156), Expect(2) = 5e-28
Identities = 32/58 (55%), Positives = 41/58 (70%)
Frame = +2
Query: 209 LTAQEAFVALKRALSKAPVLWLPDFENDLVLETNASGYGLGAVLMQDEQPMAYFSQVL 382
L A+ AF LK ++ PVL LP+F ++E +ASGYGLG VLMQ +P+AYFSQVL
Sbjct: 1506 LEAEVAFQKLKTTMTTIPVLALPNFSQLFIVEMDASGYGLGTVLMQSHRPVAYFSQVL 1563
>ref|NP_001064331.1| Os10g0317000 [Oryza sativa Japonica Group]
gi|15217201|gb|AAK92545.1|AC051624_3 Putative
retroelement [Oryza sativa Japonica Group]
gi|31431040|gb|AAP52878.1| retrotransposon protein,
putative, unclassified, expressed [Oryza sativa Japonica
Group] gi|113638940|dbj|BAF26245.1| Os10g0317000 [Oryza
sativa Japonica Group]
Length = 1476
Score = 85.9 bits (211), Expect(2) = 5e-27
Identities = 42/69 (60%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Frame = +1
Query: 4 YLGHII-SKGVEMDQAKVQAMEKWHEPKTITELRVFLGLSGYYKKFVQDYGKIPAPLTEL 180
YLGHII + GV MD AKVQA+ W +P++ +R FLGL+GYY+KFV DYG I APLT L
Sbjct: 730 YLGHIIGATGVSMDPAKVQAVVDWPQPRSARTVRGFLGLAGYYRKFVHDYGTIAAPLTAL 789
Query: 181 LKKDQFIWS 207
KK+ F WS
Sbjct: 790 TKKEGFRWS 798
Score = 60.1 bits (144), Expect(2) = 5e-27
Identities = 29/51 (56%), Positives = 39/51 (76%)
Frame = +2
Query: 224 AFVALKRALSKAPVLWLPDFENDLVLETNASGYGLGAVLMQDEQPMAYFSQ 376
AF ALK A++ APVL LPDF V+E +AS +G GAVL+QD+ P+A+FS+
Sbjct: 804 AFHALKHAVTTAPVLALPDFVKPFVVECDASTHGFGAVLLQDKHPLAFFSR 854