BLASTX nr result

ID: Atractylodes22_contig00039360 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00039360
         (426 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526000.1| cleavage and polyadenylation specificity fac...    91   7e-17
ref|XP_003529221.1| PREDICTED: E3 ubiquitin protein ligase RIE1-...    91   1e-16
ref|XP_003518612.1| PREDICTED: E3 ubiquitin protein ligase RIE1-...    91   1e-16
ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261...    89   4e-16
gb|AFK39085.1| unknown [Lotus japonicus]                               89   5e-16

>ref|XP_002526000.1| cleavage and polyadenylation specificity factor, putative [Ricinus
            communis] gi|223534732|gb|EEF36424.1| cleavage and
            polyadenylation specificity factor, putative [Ricinus
            communis]
          Length = 963

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 38/55 (69%), Positives = 45/55 (81%), Gaps = 1/55 (1%)
 Frame = -1

Query: 426  DAECCICLCAYDDGEELYSLLCTHHFHATCIAKWLKMKAICPLCKHHI-HPNDQV 265
            DAECCICLC Y+DG EL++L C HHFH+TCI KWLKM A CPLCK++I   N+QV
Sbjct: 909  DAECCICLCPYEDGAELHTLPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQV 963


>ref|XP_003529221.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Glycine max]
          Length = 352

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 37/55 (67%), Positives = 46/55 (83%), Gaps = 1/55 (1%)
 Frame = -1

Query: 426 DAECCICLCAYDDGEELYSLLCTHHFHATCIAKWLKMKAICPLCKHHI-HPNDQV 265
           DAECCICLC+Y+DG EL++L C HHFH++CI KWLKM A CPLCK++I   N+QV
Sbjct: 298 DAECCICLCSYEDGAELHALPCNHHFHSSCIVKWLKMNATCPLCKYNILKGNEQV 352


>ref|XP_003518612.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Glycine max]
          Length = 357

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 37/55 (67%), Positives = 46/55 (83%), Gaps = 1/55 (1%)
 Frame = -1

Query: 426 DAECCICLCAYDDGEELYSLLCTHHFHATCIAKWLKMKAICPLCKHHI-HPNDQV 265
           DAECCICLC+Y+DG EL++L C HHFH++CI KWLKM A CPLCK++I   N+QV
Sbjct: 303 DAECCICLCSYEDGAELHALPCNHHFHSSCIVKWLKMNATCPLCKYNILKGNEQV 357


>ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261060 [Vitis vinifera]
          Length = 2299

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 35/48 (72%), Positives = 42/48 (87%)
 Frame = -1

Query: 426  DAECCICLCAYDDGEELYSLLCTHHFHATCIAKWLKMKAICPLCKHHI 283
            DAECCICL +Y+DG EL++L C HHFH+TCIAKWLKM A CPLCK++I
Sbjct: 2245 DAECCICLSSYEDGAELHALPCNHHFHSTCIAKWLKMNATCPLCKYNI 2292


>gb|AFK39085.1| unknown [Lotus japonicus]
          Length = 89

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 37/55 (67%), Positives = 45/55 (81%), Gaps = 1/55 (1%)
 Frame = -1

Query: 426 DAECCICLCAYDDGEELYSLLCTHHFHATCIAKWLKMKAICPLCKHHI-HPNDQV 265
           DAECCIC+ +Y+DG EL+SL C HHFH+TCI KWLKM A CPLCK++I   N+QV
Sbjct: 35  DAECCICISSYEDGAELHSLPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQV 89


Top