BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00039349
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268109.1| PREDICTED: pentatricopeptide repeat-containi...   146   2e-33
ref|XP_003552730.1| PREDICTED: pentatricopeptide repeat-containi...   134   8e-30
ref|XP_003538531.1| PREDICTED: pentatricopeptide repeat-containi...   132   3e-29
ref|XP_002321108.1| predicted protein [Populus trichocarpa] gi|2...   124   6e-27
ref|NP_193155.4| pentatricopeptide repeat-containing protein [Ar...   117   1e-24

>ref|XP_002268109.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14190,
           chloroplastic-like [Vitis vinifera]
          Length = 581

 Score =  146 bits (368), Expect = 2e-33
 Identities = 71/129 (55%), Positives = 95/129 (73%), Gaps = 6/129 (4%)
 Frame = -1

Query: 371 LLSRTGMESVVQEMDYKKVRWSVTVANTMLFAYSKMKDFEHLKSILLEMADRHVKPDIVT 192
           LLSR G++S+V+EM+ K V W+ TVANT+L AY KMKDF  L+ +LLE++ RHVKPDIVT
Sbjct: 387 LLSRKGLDSIVKEMEAKNVPWNATVANTILLAYLKMKDFTRLRILLLELSTRHVKPDIVT 446

Query: 191 CGILCDAHGVGFDGVGELSSWRKMGFFGDVVEFKTDPLVLLAFGKGDFLRTAEEL----- 27
            GIL DA+ +GF+G   L++WR+ GF  + VE  TDPLVL AFGKG+FL++ EE+     
Sbjct: 447 VGILFDANRIGFNGTMALNTWRRTGFLDEAVEMNTDPLVLSAFGKGNFLQSCEEMYSSLE 506

Query: 26  -DHRRNKAW 3
            + R+ K W
Sbjct: 507 PEARKKKIW 515


>ref|XP_003552730.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14190,
           chloroplastic-like [Glycine max]
          Length = 509

 Score =  134 bits (337), Expect = 8e-30
 Identities = 68/128 (53%), Positives = 88/128 (68%), Gaps = 6/128 (4%)
 Frame = -1

Query: 368 LSRTGMESVVQEMDYKKVRWSVTVANTMLFAYSKMKDFEHLKSILLEMADRHVKPDIVTC 189
           LS+ GM+ VV+EM   KV W+VTVAN ++ AY KMKDF HLK +L ++    V+PDI+T 
Sbjct: 360 LSKKGMDIVVREMRDAKVNWNVTVANIIMLAYVKMKDFRHLKILLSQLPIYRVQPDIITI 419

Query: 188 GILCDAHGVGFDGVGELSSWRKMGFFGDVVEFKTDPLVLLAFGKGDFLRTAEEL------ 27
           GIL DA  +GFDG G L +WR+MG+   VVE KTD LVL AFGKG FL++ EE+      
Sbjct: 420 GILFDATRIGFDGSGALETWRRMGYLYRVVEIKTDSLVLTAFGKGHFLKSCEEVYSSLHP 479

Query: 26  DHRRNKAW 3
           + R+ K W
Sbjct: 480 EDRKRKTW 487


>ref|XP_003538531.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14190,
           chloroplastic-like [Glycine max]
          Length = 506

 Score =  132 bits (332), Expect = 3e-29
 Identities = 65/115 (56%), Positives = 84/115 (73%)
 Frame = -1

Query: 371 LLSRTGMESVVQEMDYKKVRWSVTVANTMLFAYSKMKDFEHLKSILLEMADRHVKPDIVT 192
           LLS+ GM+ VVQEM   KV W+VTVAN ++ AY KMK+F HL+ +L ++    V+PDI+T
Sbjct: 357 LLSKKGMDIVVQEMQDAKVSWNVTVANIIMLAYVKMKEFRHLRILLSQLPIYRVQPDIIT 416

Query: 191 CGILCDAHGVGFDGVGELSSWRKMGFFGDVVEFKTDPLVLLAFGKGDFLRTAEEL 27
            GIL DA  +GFDG G L +WR+MG+   VVE KTD LVL AFGKG FL++ EE+
Sbjct: 417 IGILFDATRIGFDGSGALETWRRMGYLYRVVEMKTDSLVLTAFGKGHFLKSCEEV 471


>ref|XP_002321108.1| predicted protein [Populus trichocarpa] gi|222861881|gb|EEE99423.1|
           predicted protein [Populus trichocarpa]
          Length = 419

 Score =  124 bits (312), Expect = 6e-27
 Identities = 64/114 (56%), Positives = 79/114 (69%)
 Frame = -1

Query: 371 LLSRTGMESVVQEMDYKKVRWSVTVANTMLFAYSKMKDFEHLKSILLEMADRHVKPDIVT 192
           LLSR GM++VV+EM+  K  W++TVAN +L AY KMKDF  L+ +L ++ +  V+PDIVT
Sbjct: 282 LLSRRGMDAVVREMEDAKACWNITVANIILLAYLKMKDFTRLRILLSKLPEIRVEPDIVT 341

Query: 191 CGILCDAHGVGFDGVGELSSWRKMGFFGDVVEFKTDPLVLLAFGKGDFLRTAEE 30
            GIL DA  +GFDG   L  WRKMG     VE  TDPL L AFGKG FLR+ EE
Sbjct: 342 FGILFDAEEIGFDGKECLEMWRKMGLLYRRVEMNTDPLALSAFGKGSFLRSCEE 395


>ref|NP_193155.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|223635638|sp|O23278.2|PP310_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g14190, chloroplastic; Flags: Precursor
           gi|332657991|gb|AEE83391.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 501

 Score =  117 bits (293), Expect = 1e-24
 Identities = 58/118 (49%), Positives = 79/118 (66%)
 Frame = -1

Query: 371 LLSRTGMESVVQEMDYKKVRWSVTVANTMLFAYSKMKDFEHLKSILLEMADRHVKPDIVT 192
           L+SR G++ VV+EM+  +V W+ T AN  L AYSKM DF  ++ +L E+  +HVK D+VT
Sbjct: 355 LVSRKGLDYVVKEMEEARVPWNTTFANIALLAYSKMGDFTSIELLLSELRIKHVKLDLVT 414

Query: 191 CGILCDAHGVGFDGVGELSSWRKMGFFGDVVEFKTDPLVLLAFGKGDFLRTAEELDHR 18
            GI+ D     FDG G   +W+K+GF    VE KTDPLV  AFGKG FLR+ EE+ ++
Sbjct: 415 VGIVFDLSEARFDGTGVFMTWKKIGFLDKPVEMKTDPLVHAAFGKGQFLRSCEEVKNQ 472