BLASTX nr result

ID: Atractylodes22_contig00039269 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00039269
         (455 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264711.2| PREDICTED: katanin p80 WD40 repeat-containin...    72   4e-11
emb|CBI35743.3| unnamed protein product [Vitis vinifera]               72   4e-11
ref|XP_002521412.1| katanin P80 subunit, putative [Ricinus commu...    71   8e-11
ref|XP_004158060.1| PREDICTED: katanin p80 WD40 repeat-containin...    68   7e-10
ref|XP_004146637.1| PREDICTED: katanin p80 WD40 repeat-containin...    68   7e-10

>ref|XP_002264711.2| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog 1
           [Vitis vinifera]
          Length = 220

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 34/59 (57%), Positives = 43/59 (72%)
 Frame = -3

Query: 453 LEMLLKLVAVCGPVTSSTISVPPAMGVDLQAEKRLACCNHCHAHFQRIHRSVPNVIRFG 277
           L+MLLKLV+V GPV  S IS PPA+GV+LQAE R  CCN C    Q+I +++P +IR G
Sbjct: 145 LDMLLKLVSVFGPVIHSAISAPPAIGVNLQAEHRRECCNQCFIQLQKIQKNLPVIIRRG 203


>emb|CBI35743.3| unnamed protein product [Vitis vinifera]
          Length = 314

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 34/59 (57%), Positives = 43/59 (72%)
 Frame = -3

Query: 453 LEMLLKLVAVCGPVTSSTISVPPAMGVDLQAEKRLACCNHCHAHFQRIHRSVPNVIRFG 277
           L+MLLKLV+V GPV  S IS PPA+GV+LQAE R  CCN C    Q+I +++P +IR G
Sbjct: 239 LDMLLKLVSVFGPVIHSAISAPPAIGVNLQAEHRRECCNQCFIQLQKIQKNLPVIIRRG 297


>ref|XP_002521412.1| katanin P80 subunit, putative [Ricinus communis]
            gi|223539311|gb|EEF40902.1| katanin P80 subunit, putative
            [Ricinus communis]
          Length = 936

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 36/62 (58%), Positives = 43/62 (69%)
 Frame = -3

Query: 453  LEMLLKLVAVCGPVTSSTISVPPAMGVDLQAEKRLACCNHCHAHFQRIHRSVPNVIRFGA 274
            LEMLLKLVAV GPV  STIS PP +GV+L AE+RL CC  C    Q+I + +P +IR G 
Sbjct: 861  LEMLLKLVAVFGPVIRSTISGPPLVGVNLHAEQRLECCKQCFVQLQKIQQILPALIRKGG 920

Query: 273  DL 268
             L
Sbjct: 921  VL 922


>ref|XP_004158060.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
            [Cucumis sativus]
          Length = 906

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 29/62 (46%), Positives = 42/62 (67%)
 Frame = -3

Query: 453  LEMLLKLVAVCGPVTSSTISVPPAMGVDLQAEKRLACCNHCHAHFQRIHRSVPNVIRFGA 274
            +E+L+KLVAV G V SS +S PP +GVDL AE+R+ CC  C    Q++ + +P+ +R G 
Sbjct: 831  MEILVKLVAVFGHVISSAVSAPPVVGVDLHAEQRVQCCKQCFTQLQKVQKIIPSFVRRGG 890

Query: 273  DL 268
             L
Sbjct: 891  SL 892


>ref|XP_004146637.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
            [Cucumis sativus]
          Length = 922

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 29/62 (46%), Positives = 42/62 (67%)
 Frame = -3

Query: 453  LEMLLKLVAVCGPVTSSTISVPPAMGVDLQAEKRLACCNHCHAHFQRIHRSVPNVIRFGA 274
            +E+L+KLVAV G V SS +S PP +GVDL AE+R+ CC  C    Q++ + +P+ +R G 
Sbjct: 847  MEILVKLVAVFGHVISSAVSAPPVVGVDLHAEQRVQCCKQCFTQLQKVQKIIPSFVRRGG 906

Query: 273  DL 268
             L
Sbjct: 907  SL 908


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