BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00039234
         (247 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEJ07955.1| putative polyprotein [Sorghum propinquum]              100   9e-20
gb|AAF63108.1|AC006423_9 Hypothetical protein [Arabidopsis thali...    97   2e-18
gb|AAF79692.1|AC022314_33 F9C16.1 [Arabidopsis thaliana]               97   2e-18
gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp...    96   4e-18
gb|AAC28209.1| contains similarity to reverse transcriptases [Ar...    94   1e-17

>gb|AEJ07955.1| putative polyprotein [Sorghum propinquum]
          Length = 826

 Score =  100 bits (250), Expect = 9e-20
 Identities = 48/82 (58%), Positives = 60/82 (73%)
 Frame = +1

Query: 1   VGNGALLPVSCIGNTFLPFSHKQLALKNVLVSDKMVKNLISVRRFTVDNWVSVEFDPFGF 180
           VGNGALLPV+ IG+    F H+ L L  VLVS  ++KNLIS+RRFT DN   +EFDPFG 
Sbjct: 495 VGNGALLPVTTIGSRIFSFPHRNLVLNKVLVSPHIIKNLISIRRFTTDNNCFIEFDPFGL 554

Query: 181 SIKDLNTGHLLHRSDSVGDLYP 246
           S+KDL T +++ R +S GDLYP
Sbjct: 555 SVKDLQTRNVIARCNSSGDLYP 576


>gb|AAF63108.1|AC006423_9 Hypothetical protein [Arabidopsis thaliana]
          Length = 474

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 47/81 (58%), Positives = 58/81 (71%)
 Frame = +1

Query: 4   GNGALLPVSCIGNTFLPFSHKQLALKNVLVSDKMVKNLISVRRFTVDNWVSVEFDPFGFS 183
           GNG  +PV+  G+ F+    + L L NVLV+  ++KNL+SVRRFT DN  S+EFDPFGFS
Sbjct: 315 GNGGCIPVTATGSLFIANKPRPLTLHNVLVTPDIIKNLVSVRRFTKDNKCSIEFDPFGFS 374

Query: 184 IKDLNTGHLLHRSDSVGDLYP 246
           IKDL T   L R+DS GDLYP
Sbjct: 375 IKDLRTKRTLLRNDSSGDLYP 395


>gb|AAF79692.1|AC022314_33 F9C16.1 [Arabidopsis thaliana]
          Length = 820

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 47/81 (58%), Positives = 58/81 (71%)
 Frame = +1

Query: 4   GNGALLPVSCIGNTFLPFSHKQLALKNVLVSDKMVKNLISVRRFTVDNWVSVEFDPFGFS 183
           GNG  +PV+  G+ F+    + L L NVLV+  ++KNL+SVRRFT DN  S+EFDPFGFS
Sbjct: 311 GNGGCIPVTATGSLFIANKPRPLTLHNVLVTPDIIKNLVSVRRFTKDNKCSIEFDPFGFS 370

Query: 184 IKDLNTGHLLHRSDSVGDLYP 246
           IKDL T   L R+DS GDLYP
Sbjct: 371 IKDLRTKRTLLRNDSSGDLYP 391


>gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1296

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 45/81 (55%), Positives = 58/81 (71%)
 Frame = +1

Query: 1   VGNGALLPVSCIGNTFLPFSHKQLALKNVLVSDKMVKNLISVRRFTVDNWVSVEFDPFGF 180
           VGNG+L PV  IG+  L +  +  +L+NVLV   +VKNL+SVR+F  DNW ++EFDPFGF
Sbjct: 393 VGNGSLAPVETIGHGTLSYPSRSFSLRNVLVCPAIVKNLVSVRKFVTDNWCTIEFDPFGF 452

Query: 181 SIKDLNTGHLLHRSDSVGDLY 243
           S+KDL T + L R DS G LY
Sbjct: 453 SVKDLKTRNKLLRCDSSGPLY 473


>gb|AAC28209.1| contains similarity to reverse transcriptases [Arabidopsis
           thaliana] gi|7267168|emb|CAB77880.1| putative reverse
           transcriptase [Arabidopsis thaliana]
          Length = 467

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 48/81 (59%), Positives = 58/81 (71%)
 Frame = +1

Query: 1   VGNGALLPVSCIGNTFLPFSHKQLALKNVLVSDKMVKNLISVRRFTVDNWVSVEFDPFGF 180
           VGNG+ +P   IG +FLP   + L L NVLV   ++KNL+SVR+FT DN+VSVEFDPFGF
Sbjct: 331 VGNGSSVPTKAIGYSFLPSKIRPLHLHNVLVCPSIIKNLVSVRQFTKDNYVSVEFDPFGF 390

Query: 181 SIKDLNTGHLLHRSDSVGDLY 243
           SIKD NT   L R +S G LY
Sbjct: 391 SIKDFNTWTNLLRCNSDGPLY 411