BLASTX nr result

ID: Atractylodes22_contig00039198 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00039198
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADA70357.1| proliferation cell nuclear antigen [Persea americ...    97   1e-18
sp|Q00265.1|PCNA2_DAUCA RecName: Full=Proliferating cell nuclear...    93   3e-17
emb|CAB56779.1| proliferating cell-nuclear antigen [Daucus carota]     93   3e-17
ref|XP_004150242.1| PREDICTED: proliferating cell nuclear antige...    92   4e-17
ref|XP_004167862.1| PREDICTED: proliferating cell nuclear antige...    90   2e-16

>gb|ADA70357.1| proliferation cell nuclear antigen [Persea americana]
          Length = 290

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 49/74 (66%), Positives = 61/74 (82%)
 Frame = -3

Query: 311 TKATPLASQVTVSLSSELPIVVEYKIAEMGYLRFYLAPKIEEDEEMGGYQAEPVETKKTS 132
           TKATPLA+ VT+SLSSELP+VVEYKIAEMGY+RFYLAPKIE+DEE    +A+P   KK +
Sbjct: 216 TKATPLANSVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEDDEEGMQAEAQPPPEKK-A 274

Query: 131 EKKPNAEPKSNEEP 90
           +K+P AE ++  EP
Sbjct: 275 KKEPKAEAEAKSEP 288


>sp|Q00265.1|PCNA2_DAUCA RecName: Full=Proliferating cell nuclear antigen large form;
           Short=PCNA; AltName: Full=Cyclin
          Length = 365

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 50/109 (45%), Positives = 71/109 (65%), Gaps = 7/109 (6%)
 Frame = -3

Query: 311 TKATPLASQVTVSLSSELPIVVEYKIAEMGYLRFYLAPKIEEDEEMGGYQAEPVETKKTS 132
           TKATPLA+QVT+SLSSELP+VVEYKIAEMGY+R+YLAPKIEE++E   Y A+P +    +
Sbjct: 216 TKATPLANQVTISLSSELPVVVEYKIAEMGYIRYYLAPKIEEEDEAANY-AQPAQNSAAA 274

Query: 131 EKKPNA----EPKSNEEPKRRVMK---IDLDEEEEETKPKIVTNPRSES 6
               N     E  +  + K+R +K   +D  E   + +P+     ++E+
Sbjct: 275 ATSNNGTKKNEGNNKVDSKKRAIKSEFVDDSEAATDAQPQAKAKTKTEA 323


>emb|CAB56779.1| proliferating cell-nuclear antigen [Daucus carota]
          Length = 367

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 50/109 (45%), Positives = 71/109 (65%), Gaps = 7/109 (6%)
 Frame = -3

Query: 311 TKATPLASQVTVSLSSELPIVVEYKIAEMGYLRFYLAPKIEEDEEMGGYQAEPVETKKTS 132
           TKATPLA+QVT+SLSSELP+VVEYKIAEMGY+R+YLAPKIEE++E   Y A+P +    +
Sbjct: 218 TKATPLANQVTISLSSELPVVVEYKIAEMGYIRYYLAPKIEEEDEAANY-AQPAQNSAAA 276

Query: 131 EKKPNA----EPKSNEEPKRRVMK---IDLDEEEEETKPKIVTNPRSES 6
               N     E  +  + K+R +K   +D  E   + +P+     ++E+
Sbjct: 277 ATSNNGTKKNEGNNKVDSKKRAIKSEFVDDSEAATDAQPQAKAKTKTEA 325


>ref|XP_004150242.1| PREDICTED: proliferating cell nuclear antigen large form-like
           [Cucumis sativus]
          Length = 348

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 47/86 (54%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
 Frame = -3

Query: 311 TKATPLASQVTVSLSSELPIVVEYKIAEMGYLRFYLAPKIEEDEEMGGYQAEPVETKKTS 132
           TKATPLA+QVT+S+SS+LP+VVEY+I  MGY+R+YLAPKIEE++E         E K T+
Sbjct: 216 TKATPLANQVTISMSSDLPVVVEYRIEGMGYIRYYLAPKIEEEDEAATISKPETEPKHTA 275

Query: 131 EKKPNAEPKSNEEPK-RRVMKIDLDE 57
           + KP A+ K N EP     MK + DE
Sbjct: 276 KAKPKADLKPNFEPNPESEMKSEEDE 301


>ref|XP_004167862.1| PREDICTED: proliferating cell nuclear antigen large form-like
           [Cucumis sativus]
          Length = 348

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 46/86 (53%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
 Frame = -3

Query: 311 TKATPLASQVTVSLSSELPIVVEYKIAEMGYLRFYLAPKIEEDEEMGGYQAEPVETKKTS 132
           TKATPLA+QVT+S+SS+LP+VVEY+I  MGY+R+YLAPKIEE++E         E K T+
Sbjct: 216 TKATPLANQVTISMSSDLPVVVEYRIEGMGYIRYYLAPKIEEEDEAATISKPETEPKHTA 275

Query: 131 EKKPNAEPKSNEEPK-RRVMKIDLDE 57
           + KP A+ K   EP     MK + DE
Sbjct: 276 KAKPKADLKPTFEPNPESEMKSEEDE 301


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