BLASTX nr result

ID: Atractylodes22_contig00039191 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00039191
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN05720.1| RNA-directed DNA polymerase (Reverse transcriptas...    81   8e-14
gb|ABD28747.2| Putative non-LTR retroelement reverse transcripta...    75   4e-12
ref|XP_003635790.1| Receptor-like kinase [Medicago truncatula] g...    75   6e-12
ref|XP_002303192.1| predicted protein [Populus trichocarpa] gi|2...    75   6e-12
emb|CAN74183.1| hypothetical protein VITISV_034261 [Vitis vinifera]    75   7e-12

>gb|ABN05720.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 391

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 35/71 (49%), Positives = 47/71 (66%)
 Frame = +1

Query: 4   SLDRIRRGFFWGGSDEKSKMNWVAWEKVIAPVSYGGVGLGSLRDANLAMLAKWWWRFKVD 183
           S+D I   FFWGGS++  K++WV W++V     YGG+G+  LR+ N A+L KW WR  VD
Sbjct: 225 SIDSILSKFFWGGSEDLRKISWVGWQRVCKRKEYGGLGVRRLREFNEALLGKWCWRLLVD 284

Query: 184 NSGLWRRVVWA 216
             GLW RV+ A
Sbjct: 285 RGGLWYRVLVA 295


>gb|ABD28747.2| Putative non-LTR retroelement reverse transcriptase, related
           [Medicago truncatula]
          Length = 193

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 29/71 (40%), Positives = 47/71 (66%)
 Frame = +1

Query: 4   SLDRIRRGFFWGGSDEKSKMNWVAWEKVIAPVSYGGVGLGSLRDANLAMLAKWWWRFKVD 183
           S++ +   FFWGG +EK K++WV W+ +     YGG+G+  LR+ N+A++ KW WR  ++
Sbjct: 42  SIESLFNKFFWGGGEEKRKISWVRWDTLSLRKEYGGLGVTRLREFNIALVGKWCWRLLLE 101

Query: 184 NSGLWRRVVWA 216
              LWR+V+ A
Sbjct: 102 REALWRKVLVA 112


>ref|XP_003635790.1| Receptor-like kinase [Medicago truncatula]
            gi|355501725|gb|AES82928.1| Receptor-like kinase
            [Medicago truncatula]
          Length = 2313

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 29/70 (41%), Positives = 46/70 (65%)
 Frame = +1

Query: 7    LDRIRRGFFWGGSDEKSKMNWVAWEKVIAPVSYGGVGLGSLRDANLAMLAKWWWRFKVDN 186
            ++ I + FFWGGS++ +K++W+ W+ +  P   GG+G+  LR+ N ++L KW WR  VD 
Sbjct: 1358 IESIFKRFFWGGSEDNNKISWIKWDDICVPKEDGGLGVRRLREFNFSLLGKWCWRMLVDK 1417

Query: 187  SGLWRRVVWA 216
             GLW  V+ A
Sbjct: 1418 EGLWYCVLKA 1427


>ref|XP_002303192.1| predicted protein [Populus trichocarpa] gi|222840624|gb|EEE78171.1|
           predicted protein [Populus trichocarpa]
          Length = 677

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 38/91 (41%), Positives = 57/91 (62%)
 Frame = +1

Query: 4   SLDRIRRGFFWGGSDEKSKMNWVAWEKVIAPVSYGGVGLGSLRDANLAMLAKWWWRFKVD 183
           +++R  R F W G +E  K+  V+W  V  P   GG+G+GSLRD N A+L KW WR   +
Sbjct: 163 TIERKFRAFLWSGKEESRKLCNVSWTIVTLPKRIGGLGIGSLRDKNKALLYKWLWRLGSE 222

Query: 184 NSGLWRRVVWALHSSSRKWSFIPSKVSISGA 276
           ++ LW+ VV  +H+ +  +SF+P  + ISGA
Sbjct: 223 DTSLWKEVVKFIHNIN-CFSFLPQAL-ISGA 251


>emb|CAN74183.1| hypothetical protein VITISV_034261 [Vitis vinifera]
          Length = 1201

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 36/98 (36%), Positives = 56/98 (57%), Gaps = 2/98 (2%)
 Frame = +1

Query: 7    LDRIRRGFFWGGSDEKSKMNWVAWEKVIAPVSYGGVGLGSLRDANLAMLAKWWWRFKVDN 186
            L++I+R F WG  +E+ K++ V WE     + +GG+GL  L+D N A+L KW WRF ++ 
Sbjct: 807  LEKIQREFLWGDMEERRKIHLVRWEVTCKDMRHGGLGLRYLKDFNHALLGKWLWRFPIER 866

Query: 187  SGLWRRVVWALHSSSR-KWSFIPSKVSI-SGAWKHVSK 294
              LWRRV+       +  W+    + S  +G WK + K
Sbjct: 867  ESLWRRVIVGKFGEVQGGWTTREVRESYGTGLWKDIRK 904


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