BLASTX nr result

ID: Atractylodes22_contig00039149 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00039149
         (466 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808...   117   1e-24
ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812...   115   4e-24
ref|XP_003636545.1| Pentatricopeptide repeat-containing protein ...   107   1e-21
gb|ABN08404.1| Retrotransposon gag protein [Medicago truncatula]...    73   2e-11
emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]    60   1e-07

>ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808652 [Glycine max]
          Length = 463

 Score =  117 bits (292), Expect = 1e-24
 Identities = 54/91 (59%), Positives = 70/91 (76%)
 Frame = +2

Query: 2   LKRHLIKRYGGRQSLNPFEELINLNQSGTVEEYITDFEYVSSQVSRLPETQYLGYLIGGL 181
           LKR LI RYGGR+  NPFEEL  + Q G+VEE++  FE +SSQV RLPE QYLGY + GL
Sbjct: 119 LKRALIARYGGRRLENPFEELSTIRQKGSVEEFVEAFELLSSQVGRLPEEQYLGYFMSGL 178

Query: 182 RPNLRLRVRTFNPCNRVQAMKLARDIEAEMR 274
           +P +R RVRT NP NR+Q M++A+D+E E++
Sbjct: 179 KPQIRRRVRTLNPLNRMQMMRIAKDVEEELK 209


>ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812827 [Glycine max]
          Length = 572

 Score =  115 bits (288), Expect = 4e-24
 Identities = 54/91 (59%), Positives = 70/91 (76%)
 Frame = +2

Query: 2   LKRHLIKRYGGRQSLNPFEELINLNQSGTVEEYITDFEYVSSQVSRLPETQYLGYLIGGL 181
           LKR LI RYGGR+  NPFEEL  L Q G+VEE++  FE +SSQV RLPE QYLGY + GL
Sbjct: 136 LKRALIARYGGRRLENPFEELSTLRQKGSVEEFVEAFELLSSQVGRLPEEQYLGYFMSGL 195

Query: 182 RPNLRLRVRTFNPCNRVQAMKLARDIEAEMR 274
           +P +R RVRT NP NR++ M++A+D+E E++
Sbjct: 196 KPQIRRRVRTLNPRNRMEMMRIAKDVEDELK 226


>ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355502480|gb|AES83683.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score =  107 bits (266), Expect = 1e-21
 Identities = 51/90 (56%), Positives = 67/90 (74%)
 Frame = +2

Query: 2    LKRHLIKRYGGRQSLNPFEELINLNQSGTVEEYITDFEYVSSQVSRLPETQYLGYLIGGL 181
            LK+ LI RY GR+  NPFEEL  L Q G+VEE++  FE +SSQV RLPE QYLGY + GL
Sbjct: 809  LKKALIARYDGRRLENPFEELSTLRQIGSVEEFVEAFELLSSQVGRLPEEQYLGYFMSGL 868

Query: 182  RPNLRLRVRTFNPCNRVQAMKLARDIEAEM 271
            + ++R RVRT NP  R+Q M++A+D+E E+
Sbjct: 869  KAHIRRRVRTLNPTTRMQMMRIAKDVEDEL 898


>gb|ABN08404.1| Retrotransposon gag protein [Medicago truncatula]
           gi|124360393|gb|ABN08406.1| Retrotransposon gag protein
           [Medicago truncatula]
          Length = 224

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 35/70 (50%), Positives = 48/70 (68%)
 Frame = +2

Query: 2   LKRHLIKRYGGRQSLNPFEELINLNQSGTVEEYITDFEYVSSQVSRLPETQYLGYLIGGL 181
           LK  L++RYGG    N FE+L  L Q GT+EEYI DFE + +Q+ +LP  QYLGY + GL
Sbjct: 146 LKDALLERYGGVSDGNVFEQLSALQQEGTIEEYIADFERLVAQLPKLPNDQYLGYFVHGL 205

Query: 182 RPNLRLRVRT 211
           +  +R +VR+
Sbjct: 206 KDKIRGKVRS 215


>emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]
          Length = 1469

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 34/82 (41%), Positives = 46/82 (56%)
 Frame = +2

Query: 8   RHLIKRYGGRQSLNPFEELINLNQSGTVEEYITDFEYVSSQVSRLPETQYLGYLIGGLRP 187
           R L  R+G     +P E LI L Q+ TVE+Y + FE +S+Q+  L E+  L   + GLR 
Sbjct: 155 RALQTRFGSSPYEDPMEALIRLKQTSTVEDYKSQFEALSNQLRGLAESYKLSCFLSGLRE 214

Query: 188 NLRLRVRTFNPCNRVQAMKLAR 253
           N+R  VR  NP N   A  LA+
Sbjct: 215 NIRFMVRMLNPSNLHIAFGLAK 236


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