BLASTX nr result

ID: Atractylodes22_contig00039105 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00039105
         (220 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT38747.2| Polyprotein, putative [Solanum demissum]               107   1e-21
emb|CAN81671.1| hypothetical protein VITISV_016409 [Vitis vinifera]    97   1e-18
gb|AAO26683.1|AF478369_1 gag-pol polyprotein [Vitis vinifera]          96   2e-18
gb|AAO26684.1|AF478370_1 gag-pol polyprotein [Vitis vinifera]          96   2e-18
gb|ABY49842.1| hypothetical protein [Vitis hybrid cultivar]            96   2e-18

>gb|AAT38747.2| Polyprotein, putative [Solanum demissum]
          Length = 1402

 Score =  107 bits (266), Expect = 1e-21
 Identities = 51/69 (73%), Positives = 59/69 (85%)
 Frame = -1

Query: 208  NDDGEPFHDPERYKRLVGKLNYLTVTCIDMAFAVSVVSRFMSTPTINQRALLQQILCYLK 29
            NDDG+PF DPERY+RLVGKLNYLTVT  D++FAVS+VS+FMSTPTI   A L+QILCYLK
Sbjct: 1190 NDDGDPFDDPERYRRLVGKLNYLTVTRPDISFAVSIVSQFMSTPTIKHWAALEQILCYLK 1249

Query: 28   GAPG*ELFY 2
            GAPG  + Y
Sbjct: 1250 GAPGLGIVY 1258


>emb|CAN81671.1| hypothetical protein VITISV_016409 [Vitis vinifera]
          Length = 283

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 45/68 (66%), Positives = 58/68 (85%)
 Frame = -1

Query: 205 DDGEPFHDPERYKRLVGKLNYLTVTCIDMAFAVSVVSRFMSTPTINQRALLQQILCYLKG 26
           DDG+PF++PERY+++VGKLNYLTVT  D+A+AVSVVS+F+STPT+   A L+QILCYLK 
Sbjct: 88  DDGDPFYNPERYRKVVGKLNYLTVTRPDIAYAVSVVSQFISTPTVKHWAALEQILCYLKK 147

Query: 25  APG*ELFY 2
           APG  + Y
Sbjct: 148 APGLGILY 155


>gb|AAO26683.1|AF478369_1 gag-pol polyprotein [Vitis vinifera]
          Length = 326

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 46/68 (67%), Positives = 56/68 (82%)
 Frame = -1

Query: 205 DDGEPFHDPERYKRLVGKLNYLTVTCIDMAFAVSVVSRFMSTPTINQRALLQQILCYLKG 26
           DDG+PF++PERY+R+VGKLNYLTVT  D+A+AVSVVS+F S PTI   A L+QILCYLK 
Sbjct: 93  DDGDPFYNPERYRRVVGKLNYLTVTRPDIAYAVSVVSQFTSAPTIKHWAALEQILCYLKK 152

Query: 25  APG*ELFY 2
           APG  + Y
Sbjct: 153 APGLGILY 160


>gb|AAO26684.1|AF478370_1 gag-pol polyprotein [Vitis vinifera]
          Length = 326

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 46/68 (67%), Positives = 56/68 (82%)
 Frame = -1

Query: 205 DDGEPFHDPERYKRLVGKLNYLTVTCIDMAFAVSVVSRFMSTPTINQRALLQQILCYLKG 26
           DDG+PF++PERY+R+VGKLNYLTVT  D+A+AVSVVS+F S PTI   A L+QILCYLK 
Sbjct: 93  DDGDPFYNPERYRRVVGKLNYLTVTRPDIAYAVSVVSQFTSAPTIKHWAALEQILCYLKK 152

Query: 25  APG*ELFY 2
           APG  + Y
Sbjct: 153 APGLGILY 160


>gb|ABY49842.1| hypothetical protein [Vitis hybrid cultivar]
          Length = 1382

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 46/68 (67%), Positives = 56/68 (82%)
 Frame = -1

Query: 205  DDGEPFHDPERYKRLVGKLNYLTVTCIDMAFAVSVVSRFMSTPTINQRALLQQILCYLKG 26
            DDG+PF++PERY+R+VGKLNYLTVT  D+A+AVSVVS+F S PTI   A L+QILCYLK 
Sbjct: 1149 DDGDPFYNPERYRRVVGKLNYLTVTRPDIAYAVSVVSQFTSAPTIKHWAALEQILCYLKK 1208

Query: 25   APG*ELFY 2
            APG  + Y
Sbjct: 1209 APGLGILY 1216


Top