BLASTX nr result

ID: Atractylodes22_contig00039034 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00039034
         (728 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515294.1| ATP binding protein, putative [Ricinus commu...   233   4e-59
ref|XP_003554547.1| PREDICTED: DNA mismatch repair protein Msh6-...   232   5e-59
ref|XP_003625965.1| DNA mismatch repair protein Msh6-1 [Medicago...   225   6e-57
ref|XP_002874942.1| hypothetical protein ARALYDRAFT_912022 [Arab...   223   3e-56
emb|CBI36942.3| unnamed protein product [Vitis vinifera]              219   3e-55

>ref|XP_002515294.1| ATP binding protein, putative [Ricinus communis]
            gi|223545774|gb|EEF47278.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 1306

 Score =  233 bits (593), Expect = 4e-59
 Identities = 121/187 (64%), Positives = 145/187 (77%), Gaps = 8/187 (4%)
 Frame = -1

Query: 728  MLSSATHNSLVALDELGRGTATSDGQAIAASVLEHLVNKVQCRGLFSTHYHRLALDYQQT 549
            MLSSAT NSLV LDELGRGT+TSDGQAIA SVLEH V++VQCRG+FSTHYHRL++DYQ+ 
Sbjct: 1120 MLSSATRNSLVTLDELGRGTSTSDGQAIAESVLEHFVHRVQCRGMFSTHYHRLSVDYQKD 1179

Query: 548  PKVSLCHMACKVGNGVGGLEEVTFLYKLTLGACPKSYGVNVARLAGLPDAVLQKAATKSE 369
            PKVSLCHMAC+VG GVG +EEVTFLY+LT GACPKSYGVNVARLAGLPD +LQKAA KS 
Sbjct: 1180 PKVSLCHMACQVGRGVGEVEEVTFLYRLTPGACPKSYGVNVARLAGLPDPILQKAAAKSR 1239

Query: 368  EFETMYGKKRKQLKPTNERQRWEDEMVVMMQSLRDTC---CGSAADDI-----FELQNRA 213
            EFE +YGK R++ +     Q   DEM V +Q + D      G+ ++ I      ELQ+RA
Sbjct: 1240 EFEVIYGKHRRRSEGNLTIQSNGDEMGVFLQHVFDVATNLTGNRSESIGISSLTELQHRA 1299

Query: 212  KILLAQL 192
            ++ L Q+
Sbjct: 1300 RVFLQQI 1306


>ref|XP_003554547.1| PREDICTED: DNA mismatch repair protein Msh6-1-like [Glycine max]
          Length = 1269

 Score =  232 bits (592), Expect = 5e-59
 Identities = 123/183 (67%), Positives = 142/183 (77%), Gaps = 7/183 (3%)
 Frame = -1

Query: 728  MLSSATHNSLVALDELGRGTATSDGQAIAASVLEHLVNKVQCRGLFSTHYHRLALDYQQT 549
            MLSSAT NSLVALDELGRGTATSDGQAIA SVLEHLV KVQCRGLFSTHYHRLA+DY + 
Sbjct: 1088 MLSSATCNSLVALDELGRGTATSDGQAIAESVLEHLVRKVQCRGLFSTHYHRLAVDYLKD 1147

Query: 548  PKVSLCHMACKVGNGVGGLEEVTFLYKLTLGACPKSYGVNVARLAGLPDAVLQKAATKSE 369
            PKV LCHMAC+VG+G+ GL+EVTFLY+LT GACPKSYGVNVAR+AGLP +VLQKAA KS 
Sbjct: 1148 PKVCLCHMACQVGSGIAGLDEVTFLYRLTPGACPKSYGVNVARIAGLPTSVLQKAAAKSR 1207

Query: 368  EFETMYGKKRKQLKPTNE-RQRWEDEMVVMMQSLRDT------CCGSAADDIFELQNRAK 210
            EFE  YGK RK    TN   + W DE+  ++Q L +       C GS    + ELQ++A+
Sbjct: 1208 EFEATYGKCRKVSTVTNSPNKNWVDEIAAIIQILNNAATQETICVGS----LSELQDKAR 1263

Query: 209  ILL 201
             L+
Sbjct: 1264 ELM 1266


>ref|XP_003625965.1| DNA mismatch repair protein Msh6-1 [Medicago truncatula]
            gi|355500980|gb|AES82183.1| DNA mismatch repair protein
            Msh6-1 [Medicago truncatula]
          Length = 1312

 Score =  225 bits (574), Expect = 6e-57
 Identities = 119/182 (65%), Positives = 137/182 (75%), Gaps = 6/182 (3%)
 Frame = -1

Query: 728  MLSSATHNSLVALDELGRGTATSDGQAIAASVLEHLVNKVQCRGLFSTHYHRLALDYQQT 549
            MLSSAT NSLVALDELGRGT+TSDGQAIA SVLEHLV  VQCRGLFSTHYHRLA+DY + 
Sbjct: 1130 MLSSATRNSLVALDELGRGTSTSDGQAIAESVLEHLVRSVQCRGLFSTHYHRLAIDYLKD 1189

Query: 548  PKVSLCHMACKVGNGVGGLEEVTFLYKLTLGACPKSYGVNVARLAGLPDAVLQKAATKSE 369
            PKV L HMAC+VG+G  GL+EVTFLY+L+ GACPKSYGVNVARLAGLP +VLQKA  KS 
Sbjct: 1190 PKVCLAHMACQVGSGNEGLDEVTFLYRLSAGACPKSYGVNVARLAGLPTSVLQKADAKSR 1249

Query: 368  EFETMYGKKRKQLKPTNERQRWEDEMVVMMQSLRDTC----CGSAADD--IFELQNRAKI 207
            EFE  YGK R +  P +  Q W DE++V++Q L +      C     D  I +LQ  A+ 
Sbjct: 1250 EFEATYGKYRTE--PNSSNQSWVDEIIVLVQKLNNAANNLSCEEMVSDHSIVKLQREARE 1307

Query: 206  LL 201
            LL
Sbjct: 1308 LL 1309


>ref|XP_002874942.1| hypothetical protein ARALYDRAFT_912022 [Arabidopsis lyrata subsp.
            lyrata] gi|297320779|gb|EFH51201.1| hypothetical protein
            ARALYDRAFT_912022 [Arabidopsis lyrata subsp. lyrata]
          Length = 1326

 Score =  223 bits (568), Expect = 3e-56
 Identities = 112/176 (63%), Positives = 135/176 (76%)
 Frame = -1

Query: 728  MLSSATHNSLVALDELGRGTATSDGQAIAASVLEHLVNKVQCRGLFSTHYHRLALDYQQT 549
            ML+SAT NSLV LDELGRGTATSDGQAIA SVLEH ++KVQCRGLFSTHYHRL++DYQ  
Sbjct: 1151 MLTSATRNSLVVLDELGRGTATSDGQAIAESVLEHFIDKVQCRGLFSTHYHRLSVDYQTN 1210

Query: 548  PKVSLCHMACKVGNGVGGLEEVTFLYKLTLGACPKSYGVNVARLAGLPDAVLQKAATKSE 369
            PKVSLCHMAC+VG G+GG+EEVTFLY+LT GACPKSYGVNVARLAGLPD VLQ+A  KS+
Sbjct: 1211 PKVSLCHMACQVGEGIGGVEEVTFLYRLTPGACPKSYGVNVARLAGLPDYVLQRAVIKSQ 1270

Query: 368  EFETMYGKKRKQLKPTNERQRWEDEMVVMMQSLRDTCCGSAADDIFELQNRAKILL 201
            EFE +YGKK++    T + +       ++     D+   ++ D + EL + A   L
Sbjct: 1271 EFEALYGKKQR----TTDHKMAAMIKQIISSVASDSDYSASKDSLSELHSMANTFL 1322


>emb|CBI36942.3| unnamed protein product [Vitis vinifera]
          Length = 1237

 Score =  219 bits (559), Expect = 3e-55
 Identities = 120/191 (62%), Positives = 144/191 (75%), Gaps = 13/191 (6%)
 Frame = -1

Query: 728  MLSSATHNSLVALDELGRGTATSDGQAIAASVLEHLVNKVQCRGLFSTHYHRLALDYQQT 549
            ML+SAT NSLVALDELGRGT+TSDGQAIA SVLEH V+KV+CRG+FSTHYHRLA+DY++ 
Sbjct: 1046 MLTSATCNSLVALDELGRGTSTSDGQAIAESVLEHFVHKVRCRGMFSTHYHRLAVDYKKN 1105

Query: 548  PKVSLCHMACKVGNGVGGLEEVTFLYKLTLGACPKSYGVNVARLAGLPDAVLQKAATKSE 369
             KVSLCHMAC+VG GVGG+EEVTFLY+L  GACPKSYGVNVARLAGLP++VLQKAA KS 
Sbjct: 1106 SKVSLCHMACQVGKGVGGVEEVTFLYRLRPGACPKSYGVNVARLAGLPNSVLQKAAAKSR 1165

Query: 368  EFETMYGKKRKQLKP-TNER---QRWEDEMVVMMQSLRDTCCGSA---------ADDIFE 228
            E E +YG+ RK      +ER   Q  ED++V  +QSL +     +         A  + +
Sbjct: 1166 EIEGIYGRHRKGSDDGCDERLSSQNSEDDVVFFIQSLINGVAKLSYHKSFKDIHASSLSD 1225

Query: 227  LQNRAKILLAQ 195
            LQ RA+I L Q
Sbjct: 1226 LQQRARIFLDQ 1236


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