BLASTX nr result

ID: Atractylodes22_contig00039007 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00039007
         (507 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323327.1| predicted protein [Populus trichocarpa] gi|2...    59   4e-07
ref|XP_002334139.1| predicted protein [Populus trichocarpa] gi|2...    58   7e-07
ref|XP_002317723.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06
ref|XP_003554214.1| PREDICTED: uncharacterized protein LOC100810...    52   5e-06
dbj|BAF80452.1| DC1 domain containing protein [Nicotiana tabacum]      54   5e-06

>ref|XP_002323327.1| predicted protein [Populus trichocarpa] gi|222867957|gb|EEF05088.1|
           predicted protein [Populus trichocarpa]
          Length = 675

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 36/93 (38%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
 Frame = +1

Query: 175 CSMCEEQIYSFHLCYYECTECNYSLHKFCAELPITLQN--HPLHPGHYLTLSKRFQYSDD 348
           CS C+E I       Y CT CN+ LHK C ELP  ++   HP HP H L           
Sbjct: 150 CSGCDEPISGPS---YRCTSCNFFLHKKCTELPQEIKRCLHPQHPLHLL----------- 195

Query: 349 GGFNYPHDEEWGCGICNIDRKMFYNYHCSICKF 447
           G     H  +W C +CN   K F  Y CS C F
Sbjct: 196 GKPPAHHTGKWMCDLCNKTCKSFV-YRCSFCNF 227


>ref|XP_002334139.1| predicted protein [Populus trichocarpa] gi|222869849|gb|EEF06980.1|
           predicted protein [Populus trichocarpa]
          Length = 220

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 38/94 (40%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
 Frame = +1

Query: 175 CSMCEEQIYSFHLCYYECTECNYSLHKFCAELP--ITLQNHPLHPGHYLTLSKRFQYSDD 348
           CS  E QI+      Y CT C + LHK CAELP  I  + HP HP H L  S        
Sbjct: 29  CSGYEGQIWG---PCYSCTSCYFFLHKKCAELPREIKRRIHPRHPLHLLAKS-------- 77

Query: 349 GGFNYPHDEEWGCGICNIDRKMFYNYHCSICKFN 450
                P++ E+ C  C    K F  YHCS CKF+
Sbjct: 78  -----PYEGEYECDRCAKTFKSFV-YHCSFCKFD 105


>ref|XP_002317723.1| predicted protein [Populus trichocarpa] gi|222858396|gb|EEE95943.1|
           predicted protein [Populus trichocarpa]
          Length = 326

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 35/92 (38%), Positives = 45/92 (48%)
 Frame = +1

Query: 175 CSMCEEQIYSFHLCYYECTECNYSLHKFCAELPITLQNHPLHPGHYLTLSKRFQYSDDGG 354
           CS C  Q   +    Y C  CN++LH  C ++P TL  HP HP H LTL     Y   G 
Sbjct: 32  CSACNLQPSGW---MYSCKPCNFTLHISCTQMP-TLITHPCHPIHPLTLFSTPVY-PGGS 86

Query: 355 FNYPHDEEWGCGICNIDRKMFYNYHCSICKFN 450
           FN       GCG+    +   +NYHC+ C F+
Sbjct: 87  FNCD-----GCGL----QGNGFNYHCTTCDFD 109


>ref|XP_003554214.1| PREDICTED: uncharacterized protein LOC100810028 [Glycine max]
          Length = 567

 Score = 51.6 bits (122), Expect(2) = 5e-06
 Identities = 34/98 (34%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
 Frame = +1

Query: 163 NSGRCSMCEEQIYSFHLCYYECTECNYSLHKFCAELPITLQNHPLHPGHYLTLSKRFQYS 342
           N   CS CE+ I     C   C +CNY LHK CA++   ++ HP HP H L L     Y 
Sbjct: 24  NQVLCSGCEKLISGPVFC---CVQCNYVLHKKCAQIARHVK-HPFHPQHPLVLLSTTPYE 79

Query: 343 DDGGFNYPHDEEWGCGICNIDRKMFYN--YHCSICKFN 450
                        G  IC+  R +F N  YHC  C ++
Sbjct: 80  -------------GPYICDSCRGLFINFVYHCYHCNYD 104



 Score = 23.5 bits (49), Expect(2) = 5e-06
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +3

Query: 45 MEQLQHFSHDHLLSL 89
          ME+++HFSH H L L
Sbjct: 1  MEKMEHFSHIHPLLL 15


>dbj|BAF80452.1| DC1 domain containing protein [Nicotiana tabacum]
          Length = 236

 Score = 53.9 bits (128), Expect(2) = 5e-06
 Identities = 37/104 (35%), Positives = 47/104 (45%), Gaps = 2/104 (1%)
 Frame = +1

Query: 157 KTNSGRCSMCEEQIYSFHLCYYECTE--CNYSLHKFCAELPITLQNHPLHPGHYLTLSKR 330
           +TN   CS CE ++       Y+CT+  C ++LHK C ELP  +Q H  HP H LTL   
Sbjct: 17  ETNEIICSGCENKLSGIS---YKCTKPNCKFTLHKSCFELPRKIQ-HNSHPNHPLTLYPS 72

Query: 331 FQYSDDGGFNYPHDEEWGCGICNIDRKMFYNYHCSICKFNSWNN 462
               D   F        GC  C  + K F  Y C  C F+   N
Sbjct: 73  LPERDSIYF--------GCNACGEEPKAFV-YECLECNFSLHTN 107



 Score = 21.2 bits (43), Expect(2) = 5e-06
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 54 LQHFSHDHLLSL 89
          ++HFSH H L L
Sbjct: 1  MKHFSHPHALEL 12


Top