BLASTX nr result

ID: Atractylodes22_contig00038996 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00038996
         (453 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    88   8e-16
emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]    82   5e-14
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    80   1e-13
gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo s...    77   2e-12
gb|AEV42261.1| hypothetical protein [Beta vulgaris]                    76   2e-12

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 44/103 (42%), Positives = 64/103 (62%)
 Frame = -1

Query: 309 EVRRLSDAELQQRRAKGLCYKCDEKFSPGHRCK*RELSVCIVQESDNXXXXXXXXXXXXX 130
           E+RRL++ ELQ++RAKGLC+KCDEK+  GH+C+ +ELSV  +++++              
Sbjct: 399 EMRRLTEKELQEKRAKGLCFKCDEKWGVGHQCRRKELSVLFMEDNEEDELEGALSGSEAP 458

Query: 129 XXXXXXXQPKIEVHLNSVIEWTNPKTTKMEGIIGEQRVVVLVD 1
                   P  EV LNSVI  +NPKT K+ G+I    VVV++D
Sbjct: 459 PSPTEEIPP--EVSLNSVIGLSNPKTMKLSGLIDNHEVVVMID 499


>emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]
          Length = 2232

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 44/102 (43%), Positives = 62/102 (60%)
 Frame = -1

Query: 306  VRRLSDAELQQRRAKGLCYKCDEKFSPGHRCK*RELSVCIVQESDNXXXXXXXXXXXXXX 127
            ++RL+++ELQ RR KGL +KC+EKFSPGHRCK +EL V +V E D               
Sbjct: 976  IKRLTESELQARREKGLWFKCEEKFSPGHRCK-KELRVLLVHE-DEEEDDNQFDDRATEE 1033

Query: 126  XXXXXXQPKIEVHLNSVIEWTNPKTTKMEGIIGEQRVVVLVD 1
                  +  +E+ LNSV+  T P T K++G IG + V++LVD
Sbjct: 1034 PALIELKDAVELSLNSVVGLTTPGTMKIKGTIGSKEVIILVD 1075


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 43/104 (41%), Positives = 62/104 (59%), Gaps = 1/104 (0%)
 Frame = -1

Query: 309 EVRRLSDAELQQRRAKGLCYKCDEKFSPGHRCK*RELSVCI-VQESDNXXXXXXXXXXXX 133
           E+RRLS+ ELQ +R  GLC++CDEK++ GHRCK +ELS+ +  +E +             
Sbjct: 333 EIRRLSEKELQYKREHGLCFRCDEKWAIGHRCKKKELSILLGHEEEEEEYGSLMENIQPA 392

Query: 132 XXXXXXXXQPKIEVHLNSVIEWTNPKTTKMEGIIGEQRVVVLVD 1
                       E+ LNSV+  ++PKT KMEG I  Q+V+V+VD
Sbjct: 393 HPDDSQLEIHSPEISLNSVMGISSPKTLKMEGTIYGQKVIVMVD 436


>gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo]
          Length = 1185

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 39/101 (38%), Positives = 59/101 (58%)
 Frame = -1

Query: 303 RRLSDAELQQRRAKGLCYKCDEKFSPGHRCK*RELSVCIVQESDNXXXXXXXXXXXXXXX 124
           RR  D++LQ R+ KGLCY+CD+ FS GHRCK REL +C+V +                  
Sbjct: 290 RRWIDSKLQARKEKGLCYRCDKPFSKGHRCKNRELKLCVVADD----LIDTEMSEEDNDG 345

Query: 123 XXXXXQPKIEVHLNSVIEWTNPKTTKMEGIIGEQRVVVLVD 1
                 P +E+ L+SV+  T P T+K++G + ++ VVV++D
Sbjct: 346 GMVEIGPIVELSLSSVVGLTAPGTSKIKGKVEDREVVVMID 386


>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 42/106 (39%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
 Frame = -1

Query: 309 EVRRLSDAELQQRRAKGLCYKCDEKFSPGHRCK*RELSV---CIVQESDNXXXXXXXXXX 139
           E+RRLS+ ELQ +R +GLC++CD+K+S GHRCK +ELSV   C   E             
Sbjct: 290 EIRRLSEKELQHKRERGLCFRCDDKWSVGHRCK-KELSVLLSCKEDEEIEYGELENAPQP 348

Query: 138 XXXXXXXXXXQPKIEVHLNSVIEWTNPKTTKMEGIIGEQRVVVLVD 1
                         E+ LNSV+ ++NPKT K+ G I  + V+V++D
Sbjct: 349 EIPNTHIAETFVNPEISLNSVMGFSNPKTLKLRGTIYGEAVIVMID 394


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