BLASTX nr result

ID: Atractylodes22_contig00038958 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00038958
         (223 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAQ84042.1| pectate lyase [Malus x domestica]                       65   1e-19
gb|AEN70985.1| pectate lyase [Gossypium lobatum]                       64   3e-19
ref|XP_002515037.1| Pectate lyase precursor, putative [Ricinus c...    64   3e-19
ref|XP_002322215.1| predicted protein [Populus trichocarpa] gi|2...    65   3e-19
gb|ABV32549.1| pectase lyase [Prunus persica]                          64   3e-19

>gb|AAQ84042.1| pectate lyase [Malus x domestica]
          Length = 418

 Score = 65.1 bits (157), Expect(2) = 1e-19
 Identities = 28/37 (75%), Positives = 32/37 (86%)
 Frame = -2

Query: 222 DPSWERNCQFLADCAIVFGKGAVGGRDGKLYFVTDSG 112
           DP+WE+N Q LADCAI FGK A+GGRDGK+Y VTDSG
Sbjct: 79  DPNWEKNRQSLADCAIGFGKNAIGGRDGKIYVVTDSG 115



 Score = 55.8 bits (133), Expect(2) = 1e-19
 Identities = 29/52 (55%), Positives = 34/52 (65%), Gaps = 15/52 (28%)
 Frame = -3

Query: 113 VQDEPLWIIFRRDMMIRLKDELIM---------------AGVPCIAIQYVTN 3
           +QDEPLWIIF+RDM I+LK+ELIM               AG PCI IQ+VTN
Sbjct: 132 IQDEPLWIIFQRDMTIQLKEELIMNSFKTIDGRGASVHIAGGPCITIQFVTN 183


>gb|AEN70985.1| pectate lyase [Gossypium lobatum]
          Length = 411

 Score = 63.5 bits (153), Expect(2) = 3e-19
 Identities = 28/37 (75%), Positives = 31/37 (83%)
 Frame = -2

Query: 222 DPSWERNCQFLADCAIVFGKGAVGGRDGKLYFVTDSG 112
           DP+WE N Q LADCAI FGK A+GGRDGK+Y VTDSG
Sbjct: 72  DPNWETNRQKLADCAIGFGKNAIGGRDGKIYVVTDSG 108



 Score = 56.6 bits (135), Expect(2) = 3e-19
 Identities = 30/52 (57%), Positives = 33/52 (63%), Gaps = 15/52 (28%)
 Frame = -3

Query: 113 VQDEPLWIIFRRDMMIRLKDELIM---------------AGVPCIAIQYVTN 3
           +QDEPLWIIF RDM I+LK+ELIM               AG PCI IQYVTN
Sbjct: 125 IQDEPLWIIFARDMTIQLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTN 176


>ref|XP_002515037.1| Pectate lyase precursor, putative [Ricinus communis]
           gi|223546088|gb|EEF47591.1| Pectate lyase precursor,
           putative [Ricinus communis]
          Length = 404

 Score = 64.3 bits (155), Expect(2) = 3e-19
 Identities = 28/38 (73%), Positives = 33/38 (86%)
 Frame = -2

Query: 222 DPSWERNCQFLADCAIVFGKGAVGGRDGKLYFVTDSGS 109
           DP+WE+N Q LADCAI FGK A+GGRDGK+Y VTDSG+
Sbjct: 65  DPNWEKNRQRLADCAIGFGKHAIGGRDGKIYVVTDSGN 102



 Score = 55.8 bits (133), Expect(2) = 3e-19
 Identities = 28/52 (53%), Positives = 34/52 (65%), Gaps = 15/52 (28%)
 Frame = -3

Query: 113 VQDEPLWIIFRRDMMIRLKDELIM---------------AGVPCIAIQYVTN 3
           +Q+EPLWIIF RDM+I+LK+ELIM               AG PCI +QYVTN
Sbjct: 118 IQEEPLWIIFARDMVIKLKEELIMNSFKTIDGRGASVHIAGGPCITVQYVTN 169


>ref|XP_002322215.1| predicted protein [Populus trichocarpa] gi|222869211|gb|EEF06342.1|
           predicted protein [Populus trichocarpa]
          Length = 403

 Score = 65.1 bits (157), Expect(2) = 3e-19
 Identities = 28/38 (73%), Positives = 33/38 (86%)
 Frame = -2

Query: 222 DPSWERNCQFLADCAIVFGKGAVGGRDGKLYFVTDSGS 109
           DP+WE+N Q LADCAI FGK A+GGRDGK+Y VTDSG+
Sbjct: 64  DPNWEKNRQRLADCAIGFGKNAIGGRDGKIYVVTDSGN 101



 Score = 55.1 bits (131), Expect(2) = 3e-19
 Identities = 29/52 (55%), Positives = 33/52 (63%), Gaps = 15/52 (28%)
 Frame = -3

Query: 113 VQDEPLWIIFRRDMMIRLKDELIM---------------AGVPCIAIQYVTN 3
           +Q+EPLWIIF RDM I+LK+ELIM               AG PCI IQYVTN
Sbjct: 117 IQEEPLWIIFARDMTIQLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTN 168


>gb|ABV32549.1| pectase lyase [Prunus persica]
          Length = 413

 Score = 64.3 bits (155), Expect(2) = 3e-19
 Identities = 28/37 (75%), Positives = 32/37 (86%)
 Frame = -2

Query: 222 DPSWERNCQFLADCAIVFGKGAVGGRDGKLYFVTDSG 112
           DP+WE+N Q LADCAI FGK A+GGRDGK+Y VTDSG
Sbjct: 74  DPNWEQNRQRLADCAIGFGKNAIGGRDGKIYVVTDSG 110



 Score = 55.5 bits (132), Expect(2) = 3e-19
 Identities = 28/52 (53%), Positives = 34/52 (65%), Gaps = 15/52 (28%)
 Frame = -3

Query: 113 VQDEPLWIIFRRDMMIRLKDELIM---------------AGVPCIAIQYVTN 3
           +QDEPLWIIF+RDM I+LK+ELIM               AG PCI +Q+VTN
Sbjct: 127 IQDEPLWIIFQRDMTIQLKEELIMNSFKTIDGRGASVHIAGGPCITVQFVTN 178


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