BLASTX nr result

ID: Atractylodes22_contig00038909 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00038909
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA94145.1| retrotransposon protein, putative, Ty3-gypsy subc...   157   9e-37
emb|CAN71056.1| hypothetical protein VITISV_016917 [Vitis vinifera]   155   2e-36
emb|CAN68261.1| hypothetical protein VITISV_004267 [Vitis vinifera]   154   6e-36
gb|AAQ56285.1| putative gag-pol protein [Oryza sativa Japonica G...   154   7e-36
gb|AAV31171.1| Putative polyprotein, identical [Solanum tuberosum]    153   1e-35

>gb|ABA94145.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 927

 Score =  157 bits (397), Expect = 9e-37
 Identities = 68/96 (70%), Positives = 84/96 (87%)
 Frame = -3

Query: 289  TAYHPQTDGQSERTIQTLEDLLRACVIDFAGSWESHLPLIEFSYNNSYHASIQVAPYEAL 110
            TA+HPQ DGQSERTIQTLED+LR+C++ + GSWE HLPL+EF+YNNS+HASIQVAPYEAL
Sbjct: 742  TAFHPQADGQSERTIQTLEDMLRSCILSWKGSWEDHLPLVEFTYNNSFHASIQVAPYEAL 801

Query: 109  YGRKCRTPLCWNEVGERQLTGPEIVQQTAVKIEQIR 2
            YGRKCR+ LCW+ +GER + GP+ VQQT  +I +IR
Sbjct: 802  YGRKCRSLLCWDSIGERAILGPDWVQQTTERIAEIR 837


>emb|CAN71056.1| hypothetical protein VITISV_016917 [Vitis vinifera]
          Length = 303

 Score =  155 bits (393), Expect = 2e-36
 Identities = 67/96 (69%), Positives = 83/96 (86%)
 Frame = -3

Query: 289 TAYHPQTDGQSERTIQTLEDLLRACVIDFAGSWESHLPLIEFSYNNSYHASIQVAPYEAL 110
           TA+HPQTDGQSER IQ LEDLLRAC++D  G+W+ HLPL+EFSYNNS+ ASI +AP+EAL
Sbjct: 36  TAFHPQTDGQSERVIQVLEDLLRACILDLQGNWDDHLPLVEFSYNNSFQASIGMAPFEAL 95

Query: 109 YGRKCRTPLCWNEVGERQLTGPEIVQQTAVKIEQIR 2
           YGRKCR+P+CWN+VGER+L GPE+VQ T  K+  I+
Sbjct: 96  YGRKCRSPICWNDVGERKLLGPELVQLTVEKVALIK 131


>emb|CAN68261.1| hypothetical protein VITISV_004267 [Vitis vinifera]
          Length = 362

 Score =  154 bits (390), Expect = 6e-36
 Identities = 66/96 (68%), Positives = 83/96 (86%)
 Frame = -3

Query: 289 TAYHPQTDGQSERTIQTLEDLLRACVIDFAGSWESHLPLIEFSYNNSYHASIQVAPYEAL 110
           TA+HPQTDGQSER IQ LEDLLRAC++D  G+W+ HLPL+EF+YNNS+ ASI +AP+EAL
Sbjct: 107 TAFHPQTDGQSERVIQVLEDLLRACILDLQGNWDDHLPLVEFAYNNSFQASIGMAPFEAL 166

Query: 109 YGRKCRTPLCWNEVGERQLTGPEIVQQTAVKIEQIR 2
           YGRKCR+P+CWN+VGER+L GPE+VQ T  K+  I+
Sbjct: 167 YGRKCRSPICWNDVGERKLLGPELVQLTVEKVALIK 202


>gb|AAQ56285.1| putative gag-pol protein [Oryza sativa Japonica Group]
          Length = 552

 Score =  154 bits (389), Expect = 7e-36
 Identities = 67/95 (70%), Positives = 84/95 (88%)
 Frame = -3

Query: 289 TAYHPQTDGQSERTIQTLEDLLRACVIDFAGSWESHLPLIEFSYNNSYHASIQVAPYEAL 110
           TA+HPQTDGQSERTIQTLED+LRACV+ + G+WE HL L+EF+YNNSY ASI++AP+EAL
Sbjct: 288 TAFHPQTDGQSERTIQTLEDMLRACVLSWKGNWEDHLALVEFAYNNSYQASIKMAPFEAL 347

Query: 109 YGRKCRTPLCWNEVGERQLTGPEIVQQTAVKIEQI 5
           YGRKC +PLCW  +GER L GPEIV+QT+ K+++I
Sbjct: 348 YGRKCVSPLCWESLGERALLGPEIVEQTSKKVQEI 382


>gb|AAV31171.1| Putative polyprotein, identical [Solanum tuberosum]
          Length = 1487

 Score =  153 bits (387), Expect = 1e-35
 Identities = 68/96 (70%), Positives = 83/96 (86%)
 Frame = -3

Query: 289  TAYHPQTDGQSERTIQTLEDLLRACVIDFAGSWESHLPLIEFSYNNSYHASIQVAPYEAL 110
            TA+HPQTDGQ+ERTIQTLED+LRACVIDF G+W+ HLPLIEF+YNNSYH+SIQ+APYEAL
Sbjct: 1219 TAFHPQTDGQAERTIQTLEDMLRACVIDFKGNWDDHLPLIEFAYNNSYHSSIQMAPYEAL 1278

Query: 109  YGRKCRTPLCWNEVGERQLTGPEIVQQTAVKIEQIR 2
            YGR+CR+P+ W EVGE  L GP +V Q   K++ I+
Sbjct: 1279 YGRRCRSPIGWFEVGEAGLIGPNLVHQAMEKVKVIQ 1314


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