BLASTX nr result

ID: Atractylodes22_contig00038875 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00038875
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15662.3| unnamed protein product [Vitis vinifera]               88   8e-16
ref|XP_002280013.1| PREDICTED: pentatricopeptide repeat-containi...    88   8e-16
emb|CAN62482.1| hypothetical protein VITISV_010810 [Vitis vinifera]    88   8e-16
ref|XP_004148701.1| PREDICTED: pentatricopeptide repeat-containi...    86   3e-15
ref|XP_003533538.1| PREDICTED: pentatricopeptide repeat-containi...    82   3e-14

>emb|CBI15662.3| unnamed protein product [Vitis vinifera]
          Length = 657

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 38/52 (73%), Positives = 43/52 (82%)
 Frame = -3

Query: 391 TPLHLLQSHRICDDCHLAVKLIAKVTQRVIVVRDGSRFHCFEDGKCSCDDYW 236
           TPL ++QSHRIC DCH A+KLIA VT+R IVVRD SRFH F+DG CSC DYW
Sbjct: 606 TPLQIVQSHRICGDCHSAIKLIALVTRREIVVRDASRFHHFKDGSCSCGDYW 657


>ref|XP_002280013.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic [Vitis vinifera]
          Length = 704

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 38/52 (73%), Positives = 43/52 (82%)
 Frame = -3

Query: 391 TPLHLLQSHRICDDCHLAVKLIAKVTQRVIVVRDGSRFHCFEDGKCSCDDYW 236
           TPL ++QSHRIC DCH A+KLIA VT+R IVVRD SRFH F+DG CSC DYW
Sbjct: 653 TPLQIVQSHRICGDCHSAIKLIALVTRREIVVRDASRFHHFKDGSCSCGDYW 704


>emb|CAN62482.1| hypothetical protein VITISV_010810 [Vitis vinifera]
          Length = 704

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 38/52 (73%), Positives = 43/52 (82%)
 Frame = -3

Query: 391 TPLHLLQSHRICDDCHLAVKLIAKVTQRVIVVRDGSRFHCFEDGKCSCDDYW 236
           TPL ++QSHRIC DCH A+KLIA VT+R IVVRD SRFH F+DG CSC DYW
Sbjct: 653 TPLQIVQSHRICGDCHSAIKLIALVTRREIVVRDASRFHHFKDGSCSCGDYW 704


>ref|XP_004148701.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic-like [Cucumis sativus]
           gi|449517215|ref|XP_004165641.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic-like [Cucumis sativus]
          Length = 706

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 35/52 (67%), Positives = 41/52 (78%)
 Frame = -3

Query: 391 TPLHLLQSHRICDDCHLAVKLIAKVTQRVIVVRDGSRFHCFEDGKCSCDDYW 236
           TPL ++QSHRIC DCH  +KLIA +T+R IV+RD SRFH F DG CSC DYW
Sbjct: 655 TPLQIVQSHRICSDCHSVIKLIAMITKREIVIRDASRFHHFRDGSCSCGDYW 706


>ref|XP_003533538.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic-like [Glycine max]
          Length = 690

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 35/52 (67%), Positives = 38/52 (73%)
 Frame = -3

Query: 391 TPLHLLQSHRICDDCHLAVKLIAKVTQRVIVVRDGSRFHCFEDGKCSCDDYW 236
           TPL + Q HR+C DCH A+K IA VT R IVVRD SRFH F DG CSC DYW
Sbjct: 639 TPLQITQGHRVCGDCHSAIKFIAMVTGREIVVRDASRFHHFRDGSCSCGDYW 690


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