BLASTX nr result

ID: Atractylodes22_contig00038874 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00038874
         (917 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280013.1| PREDICTED: pentatricopeptide repeat-containi...   446   e-123
emb|CAN62482.1| hypothetical protein VITISV_010810 [Vitis vinifera]   446   e-123
ref|XP_003533538.1| PREDICTED: pentatricopeptide repeat-containi...   426   e-117
ref|XP_003531467.1| PREDICTED: pentatricopeptide repeat-containi...   425   e-117
ref|XP_002322250.1| predicted protein [Populus trichocarpa] gi|2...   425   e-117

>ref|XP_002280013.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
            chloroplastic [Vitis vinifera]
          Length = 704

 Score =  446 bits (1148), Expect = e-123
 Identities = 218/293 (74%), Positives = 249/293 (84%), Gaps = 1/293 (0%)
 Frame = +1

Query: 40   ASIAGYGNHGQGIEAIELFKRMIREKMTPNHVTFLAVLSACSYSGLSDEGWEIFELMCMD 219
            A IAGYGNHG+G+EA+E+F+RM+ E M PNHVTFLAVLSACSYSGLSD GWEIFE M  D
Sbjct: 404  ALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRD 463

Query: 220  FKVKPRAMHYACMIELLGREGLLDEAFALIRDAPFNPTVNMWAALLTACRVHKNLELGKF 399
             K+KPRAMHYACMIELLGREGLLDEAFALI+DAPF PTVNMWAALLTACRVHKN ELGKF
Sbjct: 464  HKIKPRAMHYACMIELLGREGLLDEAFALIKDAPFKPTVNMWAALLTACRVHKNFELGKF 523

Query: 400  AAEKIYGMEPEKLSNYVVLLNIYNSCGKRDEAASVFHTLKKKGLRMLPACTWIDVKKQQH 579
            AAEK+YGM PEKLSNYVVLLNIYN  G+ +EAA+V  TLK++GLRMLPAC+WI++KKQ +
Sbjct: 524  AAEKLYGMGPEKLSNYVVLLNIYNRSGRLEEAAAVIQTLKRRGLRMLPACSWIEIKKQPY 583

Query: 580  MFLSGDKSKPH-VQILRNLKKLMSEIVKYGYVPKKNSLLPDVDELEEQMLLYHSEKLAVS 756
             F+SGDK      +I + L +LM EI K+GYVP+   LLPDVDE EE++LLYHSEKLA++
Sbjct: 584  GFISGDKCHAQSKEIYQKLDELMLEISKHGYVPQDKFLLPDVDEQEERVLLYHSEKLAIA 643

Query: 757  FGLINTSHSTPLHLVQSHRICDDCHLAVKLIAKVTGRVIVVRDGSRFHRFEDG 915
            FGLINTS  TPL +VQSHRIC DCH A+KLIA VT R IVVRD SRFH F+DG
Sbjct: 644  FGLINTSDWTPLQIVQSHRICGDCHSAIKLIALVTRREIVVRDASRFHHFKDG 696


>emb|CAN62482.1| hypothetical protein VITISV_010810 [Vitis vinifera]
          Length = 704

 Score =  446 bits (1148), Expect = e-123
 Identities = 218/293 (74%), Positives = 249/293 (84%), Gaps = 1/293 (0%)
 Frame = +1

Query: 40   ASIAGYGNHGQGIEAIELFKRMIREKMTPNHVTFLAVLSACSYSGLSDEGWEIFELMCMD 219
            A IAGYGNHG+G+EA+E+F+RM+ E M PNHVTFLAVLSACSYSGLSD GWEIFE M  D
Sbjct: 404  ALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRD 463

Query: 220  FKVKPRAMHYACMIELLGREGLLDEAFALIRDAPFNPTVNMWAALLTACRVHKNLELGKF 399
             K+KPRAMHYACMIELLGREGLLDEAFALI+DAPF PTVNMWAALLTACRVHKN ELGKF
Sbjct: 464  HKIKPRAMHYACMIELLGREGLLDEAFALIKDAPFKPTVNMWAALLTACRVHKNFELGKF 523

Query: 400  AAEKIYGMEPEKLSNYVVLLNIYNSCGKRDEAASVFHTLKKKGLRMLPACTWIDVKKQQH 579
            AAEK+YGM PEKLSNYVVLLNIYN  G+ +EAA+V  TLK++GLRMLPAC+WI++KKQ +
Sbjct: 524  AAEKLYGMGPEKLSNYVVLLNIYNXSGRLEEAAAVIQTLKRRGLRMLPACSWIEIKKQPY 583

Query: 580  MFLSGDKSKPH-VQILRNLKKLMSEIVKYGYVPKKNSLLPDVDELEEQMLLYHSEKLAVS 756
             F+SGDK      +I + L +LM EI K+GYVP+   LLPDVDE EE++LLYHSEKLA++
Sbjct: 584  GFISGDKCHAQSKEIYQKLDELMLEISKHGYVPQXKFLLPDVDEQEERVLLYHSEKLAIA 643

Query: 757  FGLINTSHSTPLHLVQSHRICDDCHLAVKLIAKVTGRVIVVRDGSRFHRFEDG 915
            FGLINTS  TPL +VQSHRIC DCH A+KLIA VT R IVVRD SRFH F+DG
Sbjct: 644  FGLINTSDWTPLQIVQSHRICGDCHSAIKLIALVTRREIVVRDASRFHHFKDG 696


>ref|XP_003533538.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
            chloroplastic-like [Glycine max]
          Length = 690

 Score =  426 bits (1096), Expect = e-117
 Identities = 205/293 (69%), Positives = 236/293 (80%), Gaps = 1/293 (0%)
 Frame = +1

Query: 40   ASIAGYGNHGQGIEAIELFKRMIREKMTPNHVTFLAVLSACSYSGLSDEGWEIFELMCMD 219
            A IAGYGNHGQG EA+E+F++M+RE M PNHVTFLAVLSACSYSGLS+ GWEIF  M  D
Sbjct: 390  ALIAGYGNHGQGEEAVEMFEQMLREGMIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRD 449

Query: 220  FKVKPRAMHYACMIELLGREGLLDEAFALIRDAPFNPTVNMWAALLTACRVHKNLELGKF 399
             KVKPRAMHYACM+ELLGREGLLDEA+ LIR APF PT NMWA LLTACR+H+NLELGK 
Sbjct: 450  HKVKPRAMHYACMVELLGREGLLDEAYELIRSAPFKPTTNMWATLLTACRMHENLELGKL 509

Query: 400  AAEKIYGMEPEKLSNYVVLLNIYNSCGKRDEAASVFHTLKKKGLRMLPACTWIDVKKQQH 579
            AAE +YGMEPEKL NY+VLLN+YNS GK  EAA V  TLK+KGLRMLPACTWI+VKKQ +
Sbjct: 510  AAENLYGMEPEKLCNYIVLLNLYNSSGKLKEAAGVLQTLKRKGLRMLPACTWIEVKKQSY 569

Query: 580  MFLSGDKSKPHV-QILRNLKKLMSEIVKYGYVPKKNSLLPDVDELEEQMLLYHSEKLAVS 756
             FL GDKS     +I   +  +M EI ++GYV +  +LLPDVDE E+++L YHSEKLA++
Sbjct: 570  AFLCGDKSHSQTKEIYEKVNNMMVEISRHGYVEENKALLPDVDEEEQRILKYHSEKLAIA 629

Query: 757  FGLINTSHSTPLHLVQSHRICDDCHLAVKLIAKVTGRVIVVRDGSRFHRFEDG 915
            FGLINT H TPL + Q HR+C DCH A+K IA VTGR IVVRD SRFH F DG
Sbjct: 630  FGLINTPHWTPLQITQGHRVCGDCHSAIKFIAMVTGREIVVRDASRFHHFRDG 682


>ref|XP_003531467.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
            chloroplastic-like [Glycine max]
          Length = 691

 Score =  425 bits (1093), Expect = e-117
 Identities = 206/293 (70%), Positives = 238/293 (81%), Gaps = 1/293 (0%)
 Frame = +1

Query: 40   ASIAGYGNHGQGIEAIELFKRMIREKMTPNHVTFLAVLSACSYSGLSDEGWEIFELMCMD 219
            A IAGYGNHGQG EA+E+F++M++E +TP HVTFLAVLSACSYSGLS  GWEIF  M  D
Sbjct: 391  ALIAGYGNHGQGQEAVEMFEQMLQEGVTPTHVTFLAVLSACSYSGLSQRGWEIFYSMKRD 450

Query: 220  FKVKPRAMHYACMIELLGREGLLDEAFALIRDAPFNPTVNMWAALLTACRVHKNLELGKF 399
             KVKPRAMHYACMIELLGRE LLDEA+ALIR APF PT NMWAALLTACR+HKNLELGK 
Sbjct: 451  HKVKPRAMHYACMIELLGRESLLDEAYALIRTAPFKPTANMWAALLTACRMHKNLELGKL 510

Query: 400  AAEKIYGMEPEKLSNYVVLLNIYNSCGKRDEAASVFHTLKKKGLRMLPACTWIDVKKQQH 579
            AAEK+YGMEPEKL NY+VLLN+YNS GK  EAA +  TLKKKGLRMLPAC+W++VKKQ +
Sbjct: 511  AAEKLYGMEPEKLCNYIVLLNLYNSSGKLKEAAGILQTLKKKGLRMLPACSWVEVKKQPY 570

Query: 580  MFLSGDKSKPHV-QILRNLKKLMSEIVKYGYVPKKNSLLPDVDELEEQMLLYHSEKLAVS 756
             FL GDKS     +I + +  LM EI K+GY  +  +LLPDVDE E+++L YHSEKLA++
Sbjct: 571  AFLCGDKSHSQTKEIYQKVDNLMVEICKHGYAEENETLLPDVDEEEQRILKYHSEKLAIA 630

Query: 757  FGLINTSHSTPLHLVQSHRICDDCHLAVKLIAKVTGRVIVVRDGSRFHRFEDG 915
            FGLINT H TPL + Q HR+C DCH A+KLIA VTGR IVVRD SRFH F +G
Sbjct: 631  FGLINTPHWTPLQITQGHRVCGDCHSAIKLIAMVTGREIVVRDASRFHHFRNG 683


>ref|XP_002322250.1| predicted protein [Populus trichocarpa] gi|222869246|gb|EEF06377.1|
            predicted protein [Populus trichocarpa]
          Length = 548

 Score =  425 bits (1093), Expect = e-117
 Identities = 202/293 (68%), Positives = 243/293 (82%), Gaps = 1/293 (0%)
 Frame = +1

Query: 40   ASIAGYGNHGQGIEAIELFKRMIREKMTPNHVTFLAVLSACSYSGLSDEGWEIFELMCMD 219
            A I GYGNHG+G EA+ELF++MI+E+M PNH+TFLAVLSACS+SGLS+ GWEIF+ M  D
Sbjct: 248  ALIGGYGNHGRGSEAVELFEQMIQERMNPNHITFLAVLSACSHSGLSERGWEIFQSMGRD 307

Query: 220  FKVKPRAMHYACMIELLGREGLLDEAFALIRDAPFNPTVNMWAALLTACRVHKNLELGKF 399
             ++KPRAMHYACMIEL+GREGLLDEA ALIR APF PT NMWAALLTACRV++N ELGKF
Sbjct: 308  NRIKPRAMHYACMIELMGREGLLDEALALIRGAPFKPTANMWAALLTACRVNENFELGKF 367

Query: 400  AAEKIYGMEPEKLSNYVVLLNIYNSCGKRDEAASVFHTLKKKGLRMLPACTWIDVKKQQH 579
            AAEK+YGMEP+KL+NY+VLLNIYNS G   EAA V HTLK+KGLRM P C+WI+VK++ H
Sbjct: 368  AAEKLYGMEPDKLNNYIVLLNIYNSAGNLKEAADVVHTLKRKGLRMRPVCSWIEVKRRPH 427

Query: 580  MFLSGDKSKP-HVQILRNLKKLMSEIVKYGYVPKKNSLLPDVDELEEQMLLYHSEKLAVS 756
            +FLSGD   P   +I + + KLM EI KYGYVP + +LLPDVDE EE++ LYHSEKLA++
Sbjct: 428  VFLSGDNRHPQRKEIYQKVDKLMLEISKYGYVPNQKTLLPDVDEQEERVRLYHSEKLAIA 487

Query: 757  FGLINTSHSTPLHLVQSHRICDDCHLAVKLIAKVTGRVIVVRDGSRFHRFEDG 915
            FGLI+T +  PL +VQ HRIC DCH A+KLIA+VTGR IV+RD  RFH F+ G
Sbjct: 488  FGLISTPYWAPLQIVQGHRICGDCHEAIKLIARVTGREIVIRDAGRFHHFKHG 540


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