BLASTX nr result

ID: Atractylodes22_contig00038871 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00038871
         (948 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279701.2| PREDICTED: pentatricopeptide repeat-containi...   100   1e-38
ref|XP_003526188.1| PREDICTED: pentatricopeptide repeat-containi...    91   9e-32
ref|XP_004152030.1| PREDICTED: pentatricopeptide repeat-containi...    90   3e-30
ref|XP_002317568.1| predicted protein [Populus trichocarpa] gi|2...    87   8e-30
ref|XP_003539564.1| PREDICTED: pentatricopeptide repeat-containi...    80   1e-29

>ref|XP_002279701.2| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
           mitochondrial-like [Vitis vinifera]
          Length = 848

 Score =  100 bits (249), Expect(2) = 1e-38
 Identities = 48/80 (60%), Positives = 60/80 (75%)
 Frame = +3

Query: 240 KEVARWRKQKWVFKCTQGNHFGQLVRLCAHKLGADGTLQVSGILGRETSVKELNAMIEIC 419
           KEV+R RKQKWVFK TQG    +LV+ CA KLG + T+QV G LGRET VKE  A++ IC
Sbjct: 121 KEVSRERKQKWVFKNTQGGRLDRLVKTCAQKLGTEATIQVFGKLGRETGVKEYKALLGIC 180

Query: 420 IEKASNTDDEDVALEEFHKA 479
           IEKA  +DDE+ +LE+ +KA
Sbjct: 181 IEKARTSDDEEASLEQIYKA 200



 Score = 86.7 bits (213), Expect(2) = 1e-38
 Identities = 41/75 (54%), Positives = 51/75 (68%)
 Frame = +2

Query: 488 LRERGFEIGEETYGPFLMFIIDMGMVEEVHFFCNNIKKENPKSL*RQADYEMLLWVKVGN 667
           ++E+GF I EETYGPF M++IDMGM+EE HFF   I  EN +SL R   YEMLLWV+V N
Sbjct: 207 MKEQGFHIEEETYGPFFMYLIDMGMIEEFHFFHGVITDENSRSLSRLGYYEMLLWVRVNN 266

Query: 668 KDKIHMLMENTHGSD 712
           ++KI  L       D
Sbjct: 267 EEKIQELCNGIAADD 281


>ref|XP_003526188.1| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
           mitochondrial-like [Glycine max]
          Length = 1117

 Score = 90.9 bits (224), Expect(2) = 9e-32
 Identities = 42/80 (52%), Positives = 57/80 (71%)
 Frame = +3

Query: 240 KEVARWRKQKWVFKCTQGNHFGQLVRLCAHKLGADGTLQVSGILGRETSVKELNAMIEIC 419
           K+VAR RKQKW+FK T  + F +L+++CA KLG   T+ V G LGRET VKE N +I++C
Sbjct: 116 KDVARERKQKWIFKYTSDDRFDRLIKMCADKLGVGKTVNVFGQLGRETGVKEYNTLIKMC 175

Query: 420 IEKASNTDDEDVALEEFHKA 479
           ++KA  TDDE + + E  KA
Sbjct: 176 VKKARATDDEFIGVREMSKA 195



 Score = 73.2 bits (178), Expect(2) = 9e-32
 Identities = 32/69 (46%), Positives = 48/69 (69%)
 Frame = +2

Query: 488 LRERGFEIGEETYGPFLMFIIDMGMVEEVHFFCNNIKKENPKSL*RQADYEMLLWVKVGN 667
           +R+ G+ + E+TYGP L +++DMG+V+E   F + IK ENP S  R   YEMLLW++VGN
Sbjct: 202 MRDLGYPLEEKTYGPLLRYLVDMGLVQEFQLFTDIIKTENPSSASRLGYYEMLLWLRVGN 261

Query: 668 KDKIHMLME 694
           ++ I  + E
Sbjct: 262 EEMIRDICE 270


>ref|XP_004152030.1| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
           mitochondrial-like [Cucumis sativus]
          Length = 1295

 Score = 89.7 bits (221), Expect(2) = 3e-30
 Identities = 43/83 (51%), Positives = 59/83 (71%)
 Frame = +3

Query: 240 KEVARWRKQKWVFKCTQGNHFGQLVRLCAHKLGADGTLQVSGILGRETSVKELNAMIEIC 419
           KE++R RK  WV K TQ + F +LVR CA++LG+D TL+V G LGRET VKE NA++ IC
Sbjct: 193 KEISRERKHNWVLKNTQSDRFRRLVRSCANRLGSDVTLEVFGKLGRETGVKEYNALVGIC 252

Query: 420 IEKASNTDDEDVALEEFHKAHMV 488
           +EKA  + D +V LE+  K + +
Sbjct: 253 LEKAKASKDVEVVLEQIGKVYQL 275



 Score = 69.3 bits (168), Expect(2) = 3e-30
 Identities = 30/67 (44%), Positives = 47/67 (70%)
 Frame = +2

Query: 488 LRERGFEIGEETYGPFLMFIIDMGMVEEVHFFCNNIKKENPKSL*RQADYEMLLWVKVGN 667
           ++E+GF + +ETYGP L  +IDM M+EE +FFC  IK  NP S+ R   Y+ML ++K+ +
Sbjct: 279 MKEQGFSLEDETYGPVLACLIDMDMMEEFNFFCEAIKDGNPGSISRLGYYKMLFYIKIND 338

Query: 668 KDKIHML 688
           ++K+  L
Sbjct: 339 EEKVQEL 345


>ref|XP_002317568.1| predicted protein [Populus trichocarpa] gi|222860633|gb|EEE98180.1|
           predicted protein [Populus trichocarpa]
          Length = 320

 Score = 87.0 bits (214), Expect(2) = 8e-30
 Identities = 41/76 (53%), Positives = 56/76 (73%)
 Frame = +3

Query: 240 KEVARWRKQKWVFKCTQGNHFGQLVRLCAHKLGADGTLQVSGILGRETSVKELNAMIEIC 419
           KE++  RKQKW+FK +Q   F +LV  CA KLG D T+ V G+LGRET +KE NA++++C
Sbjct: 143 KEISYERKQKWIFKNSQVYCFDRLVDTCAFKLGTDATMDVFGMLGRETGLKEFNALMKMC 202

Query: 420 IEKASNTDDEDVALEE 467
           IE+   TDDE+VA E+
Sbjct: 203 IEQCRETDDENVAKEQ 218



 Score = 70.5 bits (171), Expect(2) = 8e-30
 Identities = 33/67 (49%), Positives = 45/67 (67%)
 Frame = +2

Query: 488 LRERGFEIGEETYGPFLMFIIDMGMVEEVHFFCNNIKKENPKSL*RQADYEMLLWVKVGN 667
           ++E+GF I EETYGPFLM +ID GMVEE +FF   IK  NP  + R   Y+M  +++V +
Sbjct: 229 MKEQGFPIEEETYGPFLMLLIDKGMVEEFYFFYGIIKDTNPSEIARLGYYDMCFYIRVND 288

Query: 668 KDKIHML 688
           + KI  L
Sbjct: 289 EKKIQEL 295


>ref|XP_003539564.1| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
           mitochondrial [Glycine max]
          Length = 755

 Score = 79.7 bits (195), Expect(2) = 1e-29
 Identities = 37/80 (46%), Positives = 56/80 (70%)
 Frame = +3

Query: 237 YKEVARWRKQKWVFKCTQGNHFGQLVRLCAHKLGADGTLQVSGILGRETSVKELNAMIEI 416
           +KE +R +KQK VF  TQ + F +LV +CA  LG + T+++ G +GRE  VK  N ++E+
Sbjct: 112 WKEQSRKKKQKCVFDFTQESRFQKLVEVCARILGPEATIELFGKVGREPDVKGYNTLVEM 171

Query: 417 CIEKASNTDDEDVALEEFHK 476
           CI+KA  TDD+D+A++E  K
Sbjct: 172 CIDKARGTDDKDIAIQELGK 191



 Score = 77.0 bits (188), Expect(2) = 1e-29
 Identities = 35/70 (50%), Positives = 50/70 (71%)
 Frame = +2

Query: 488 LRERGFEIGEETYGPFLMFIIDMGMVEEVHFFCNNIKKENPKSL*RQADYEMLLWVKVGN 667
           +RE+G E+ E+TY P L+++IDM MVEE  FFC  I+ ENP S+ R   YEML+W+K  N
Sbjct: 199 MREQGLELQEQTYRPLLLYLIDMCMVEEFQFFCVVIEDENPSSVARLGYYEMLMWLKDNN 258

Query: 668 KDKIHMLMEN 697
           ++KI  + +N
Sbjct: 259 EEKIQGICDN 268


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