BLASTX nr result

ID: Atractylodes22_contig00038849 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00038849
         (639 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269671.1| PREDICTED: SWI/SNF-related matrix-associated...   161   8e-38
emb|CAN81153.1| hypothetical protein VITISV_020819 [Vitis vinifera]   161   8e-38
ref|XP_002519341.1| Chromatin remodelling complex ATPase chain i...   156   4e-36
ref|XP_003541328.1| PREDICTED: SWI/SNF-related matrix-associated...   155   5e-36
ref|XP_002315473.1| chromatin remodeling complex subunit [Populu...   149   6e-34

>ref|XP_002269671.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin subfamily A-like protein 1 [Vitis
           vinifera] gi|297736823|emb|CBI26024.3| unnamed protein
           product [Vitis vinifera]
          Length = 677

 Score =  161 bits (408), Expect = 8e-38
 Identities = 78/97 (80%), Positives = 88/97 (90%), Gaps = 1/97 (1%)
 Frame = -1

Query: 639 PGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIIWDVVQSKLENLGQMLDGHENSLEVS 460
           PGDLIQAEDR HRIGQVSSVN++YLLANDTVDDIIWDVVQSKLENLGQMLDGHEN+LEVS
Sbjct: 580 PGDLIQAEDRVHRIGQVSSVNIHYLLANDTVDDIIWDVVQSKLENLGQMLDGHENTLEVS 639

Query: 459 YNQPRSSPTKQKTLDSFVKRCNTL-NSEQESNPKHQR 352
            +QPRSSP+KQ+T+DSF+KRCN + N E + N KH R
Sbjct: 640 VSQPRSSPSKQRTIDSFMKRCNNVDNPEHQPNLKHPR 676


>emb|CAN81153.1| hypothetical protein VITISV_020819 [Vitis vinifera]
          Length = 845

 Score =  161 bits (408), Expect = 8e-38
 Identities = 78/97 (80%), Positives = 88/97 (90%), Gaps = 1/97 (1%)
 Frame = -1

Query: 639  PGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIIWDVVQSKLENLGQMLDGHENSLEVS 460
            PGDLIQAEDR HRIGQVSSVN++YLLANDTVDDIIWDVVQSKLENLGQMLDGHEN+LEVS
Sbjct: 748  PGDLIQAEDRVHRIGQVSSVNIHYLLANDTVDDIIWDVVQSKLENLGQMLDGHENTLEVS 807

Query: 459  YNQPRSSPTKQKTLDSFVKRCNTL-NSEQESNPKHQR 352
             +QPRSSP+KQ+T+DSF+KRCN + N E + N KH R
Sbjct: 808  VSQPRSSPSKQRTIDSFMKRCNNVDNPEHQPNLKHPR 844


>ref|XP_002519341.1| Chromatin remodelling complex ATPase chain isw-1, putative [Ricinus
           communis] gi|223541656|gb|EEF43205.1| Chromatin
           remodelling complex ATPase chain isw-1, putative
           [Ricinus communis]
          Length = 674

 Score =  156 bits (394), Expect = 4e-36
 Identities = 78/98 (79%), Positives = 88/98 (89%), Gaps = 4/98 (4%)
 Frame = -1

Query: 639 PGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIIWDVVQSKLENLGQMLDGHENSLEVS 460
           PGDLIQAEDRAHRIGQVSSVN+YYLLANDTVDDIIWDVVQSKLENLGQMLDGHEN+LEVS
Sbjct: 577 PGDLIQAEDRAHRIGQVSSVNIYYLLANDTVDDIIWDVVQSKLENLGQMLDGHENALEVS 636

Query: 459 YNQPRSSPTKQKTLDSFVKRCNTLNS-EQESN---PKH 358
            +Q RSSP KQKTLDSF+KRC+ ++  EQ++    P+H
Sbjct: 637 ASQQRSSPAKQKTLDSFLKRCSNMDELEQQTKLKCPRH 674


>ref|XP_003541328.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin subfamily A-like protein 1-like
           [Glycine max]
          Length = 665

 Score =  155 bits (393), Expect = 5e-36
 Identities = 78/97 (80%), Positives = 85/97 (87%), Gaps = 1/97 (1%)
 Frame = -1

Query: 639 PGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIIWDVVQSKLENLGQMLDGHENSLEVS 460
           PGDLIQAEDRAHRIGQVSSVN+YYLLANDTVDDIIWDVVQ+KLENLGQMLDGHEN+LEVS
Sbjct: 568 PGDLIQAEDRAHRIGQVSSVNIYYLLANDTVDDIIWDVVQNKLENLGQMLDGHENALEVS 627

Query: 459 YNQPRSSPTKQKTLDSFVKRC-NTLNSEQESNPKHQR 352
            + P +SP+KQKTLD FV+RC NT   E E NPK  R
Sbjct: 628 ASLPVNSPSKQKTLDQFVRRCDNTDGLEYEPNPKRPR 664


>ref|XP_002315473.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222864513|gb|EEF01644.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 670

 Score =  149 bits (375), Expect = 6e-34
 Identities = 73/93 (78%), Positives = 83/93 (89%)
 Frame = -1

Query: 639 PGDLIQAEDRAHRIGQVSSVNVYYLLANDTVDDIIWDVVQSKLENLGQMLDGHENSLEVS 460
           PGDLIQAEDRAHRIGQVSSVN+YYLLANDTVDDIIWDVVQSKLENLGQMLDG E +LEVS
Sbjct: 574 PGDLIQAEDRAHRIGQVSSVNIYYLLANDTVDDIIWDVVQSKLENLGQMLDGQEKTLEVS 633

Query: 459 YNQPRSSPTKQKTLDSFVKRCNTLNSEQESNPK 361
            +Q RSSP KQ+TLD+++KRC+ L+ + E  PK
Sbjct: 634 ASQQRSSPAKQRTLDTYMKRCSNLD-DSEHQPK 665


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