BLASTX nr result

ID: Atractylodes22_contig00038807 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00038807
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632858.1| PREDICTED: auxin-responsive protein IAA27-li...    60   1e-07
ref|XP_002284282.1| PREDICTED: auxin-responsive protein IAA27-li...    60   1e-07
gb|AEI70506.1| auxin-responsive protein [Gossypium hirsutum]           58   7e-07

>ref|XP_003632858.1| PREDICTED: auxin-responsive protein IAA27-like isoform 2 [Vitis
           vinifera]
          Length = 334

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 40/94 (42%), Positives = 49/94 (52%), Gaps = 22/94 (23%)
 Frame = -1

Query: 312 TTSNFSTEIENNNVLNLKATELRLGLPG--------------FGNDFESK-----IVCNK 190
           ++S  S+E E +  LNL+ TELRLGLPG              FG D E K     +   K
Sbjct: 29  SSSTISSESEKSTALNLRETELRLGLPGSESPERKPQLGVSLFGKDLEDKTNGYSLGSLK 88

Query: 189 NFMSGGKRGFCD-VDSCRNWGF--NGGSEAELNK 97
            F+SG KRGF D +D    W F  NGGSE +L K
Sbjct: 89  GFVSGAKRGFSDAIDGSGKWVFSVNGGSEVDLGK 122


>ref|XP_002284282.1| PREDICTED: auxin-responsive protein IAA27-like isoform 1 [Vitis
           vinifera]
          Length = 343

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 40/94 (42%), Positives = 49/94 (52%), Gaps = 22/94 (23%)
 Frame = -1

Query: 312 TTSNFSTEIENNNVLNLKATELRLGLPG--------------FGNDFESK-----IVCNK 190
           ++S  S+E E +  LNL+ TELRLGLPG              FG D E K     +   K
Sbjct: 29  SSSTISSESEKSTALNLRETELRLGLPGSESPERKPQLGVSLFGKDLEDKTNGYSLGSLK 88

Query: 189 NFMSGGKRGFCD-VDSCRNWGF--NGGSEAELNK 97
            F+SG KRGF D +D    W F  NGGSE +L K
Sbjct: 89  GFVSGAKRGFSDAIDGSGKWVFSVNGGSEVDLGK 122


>gb|AEI70506.1| auxin-responsive protein [Gossypium hirsutum]
          Length = 332

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 52/135 (38%), Positives = 64/135 (47%), Gaps = 35/135 (25%)
 Frame = -1

Query: 306 SNFSTEIENNNVLNLKATELRLGLPG----------FGNDFESKIVCN-------KNFMS 178
           SN   +  NN  LNLK TELRLGLPG          FG D E+    N       KN +S
Sbjct: 35  SNIEDKTTNNPSLNLKETELRLGLPGSESPERKLSLFGKDLETNDKSNGFVGSPLKNLVS 94

Query: 177 GGKRGFCDV--DSCRNWGF--NGGSEAELNK---CLYSSGSFSSKND---VKQSIP---- 40
           G KRGF D    S  NW F  NG S+ EL K        G   +K +   V+ S+P    
Sbjct: 95  GAKRGFSDAIDGSNGNWVFAINGKSDVELGKGAVLASPRGGLDNKTNPQQVRTSVPVMKE 154

Query: 39  LIGV----KHVEEKK 7
           ++GV    K V++KK
Sbjct: 155 VVGVPQSPKPVQDKK 169


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