BLASTX nr result

ID: Atractylodes22_contig00038739 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00038739
         (450 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004148943.1| PREDICTED: mediator of RNA polymerase II tra...   209   2e-52
ref|XP_002532456.1| RNA binding protein, putative [Ricinus commu...   207   7e-52
ref|XP_003528804.1| PREDICTED: uncharacterized protein LOC100814...   204   8e-51
ref|XP_003548527.1| PREDICTED: uncharacterized protein LOC100818...   203   1e-50
ref|XP_003637247.1| hypothetical protein MTR_078s1015 [Medicago ...   189   2e-46

>ref|XP_004148943.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           19a-like [Cucumis sativus]
           gi|449502064|ref|XP_004161533.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 19a-like
           [Cucumis sativus]
          Length = 219

 Score =  209 bits (531), Expect = 2e-52
 Identities = 97/117 (82%), Positives = 110/117 (94%)
 Frame = -3

Query: 412 MDPESKKFGKGPRELTGAVDLINYYKLLPHHEFFCKKSLPLSISDTHYLHNVVGDSEIRK 233
           M+ E KKFG+GPRELTGAVDLI++YKLLPHH+FFCKKSLPLSISDTHYLHNVVGD+EIRK
Sbjct: 1   MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRK 60

Query: 232 GEGMQLDQLIQNTSFPRETNTRLQPFNLDILREAFQLRETAPVDLPSSEKGIPTVAG 62
           GEGMQL+QLIQNTS+PRETN R+QPF+ DIL EAFQLRET PVDLPS+EKG+PT+ G
Sbjct: 61  GEGMQLNQLIQNTSYPRETNARIQPFDQDILIEAFQLRETGPVDLPSAEKGVPTIPG 117


>ref|XP_002532456.1| RNA binding protein, putative [Ricinus communis]
           gi|223527846|gb|EEF29942.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 221

 Score =  207 bits (527), Expect = 7e-52
 Identities = 94/116 (81%), Positives = 110/116 (94%)
 Frame = -3

Query: 412 MDPESKKFGKGPRELTGAVDLINYYKLLPHHEFFCKKSLPLSISDTHYLHNVVGDSEIRK 233
           MDPESKKFG GPRELTGAVDLI+++KL+PHHEFFCK+SLPLSISDTHYLHNVVGDSEIRK
Sbjct: 1   MDPESKKFGSGPRELTGAVDLISHFKLVPHHEFFCKRSLPLSISDTHYLHNVVGDSEIRK 60

Query: 232 GEGMQLDQLIQNTSFPRETNTRLQPFNLDILREAFQLRETAPVDLPSSEKGIPTVA 65
           G+GMQLDQLIQNTS+ R++N R+QPF+LD+LREAFQL+ET P+DLP +EKG PT+A
Sbjct: 61  GDGMQLDQLIQNTSYSRDSNARIQPFDLDVLREAFQLKETTPIDLPPAEKGTPTIA 116


>ref|XP_003528804.1| PREDICTED: uncharacterized protein LOC100814559 [Glycine max]
          Length = 223

 Score =  204 bits (518), Expect = 8e-51
 Identities = 93/117 (79%), Positives = 112/117 (95%)
 Frame = -3

Query: 412 MDPESKKFGKGPRELTGAVDLINYYKLLPHHEFFCKKSLPLSISDTHYLHNVVGDSEIRK 233
           MDPE KKFG GPRELTGAVDLI+++KLLPH+EFFCK+SLP+SI+DTHYLHNVVGD+EIRK
Sbjct: 1   MDPEGKKFGGGPRELTGAVDLISHFKLLPHYEFFCKRSLPVSIADTHYLHNVVGDTEIRK 60

Query: 232 GEGMQLDQLIQNTSFPRETNTRLQPFNLDILREAFQLRETAPVDLPSSEKGIPTVAG 62
           G+GMQL+QLIQNTS  R+TN R+QPF+LD+L+EAFQLRETAP+DLP++EKGIPT+AG
Sbjct: 61  GDGMQLEQLIQNTSSFRDTNARIQPFDLDVLKEAFQLRETAPIDLPAAEKGIPTIAG 117


>ref|XP_003548527.1| PREDICTED: uncharacterized protein LOC100818495 [Glycine max]
          Length = 222

 Score =  203 bits (517), Expect = 1e-50
 Identities = 94/117 (80%), Positives = 112/117 (95%)
 Frame = -3

Query: 412 MDPESKKFGKGPRELTGAVDLINYYKLLPHHEFFCKKSLPLSISDTHYLHNVVGDSEIRK 233
           MDPE KKFG GPRELTGAVDLI+++KLLPH+EFFCK+ LP+SI+DTHYLHNVVGD+EIRK
Sbjct: 1   MDPEGKKFGGGPRELTGAVDLISHFKLLPHYEFFCKRPLPVSIADTHYLHNVVGDTEIRK 60

Query: 232 GEGMQLDQLIQNTSFPRETNTRLQPFNLDILREAFQLRETAPVDLPSSEKGIPTVAG 62
           G+GMQLDQLIQNTSF R+TN R+QPF+LD+L+EAFQLRETAP+DLP++EKGIPT+AG
Sbjct: 61  GDGMQLDQLIQNTSF-RDTNARIQPFDLDVLKEAFQLRETAPIDLPAAEKGIPTIAG 116


>ref|XP_003637247.1| hypothetical protein MTR_078s1015 [Medicago truncatula]
           gi|355503182|gb|AES84385.1| hypothetical protein
           MTR_078s1015 [Medicago truncatula]
          Length = 219

 Score =  189 bits (480), Expect = 2e-46
 Identities = 87/123 (70%), Positives = 110/123 (89%), Gaps = 6/123 (4%)
 Frame = -3

Query: 412 MDPESKKFGK------GPRELTGAVDLINYYKLLPHHEFFCKKSLPLSISDTHYLHNVVG 251
           MDPE K   +      GPRELTGAVDLI+++KL+PH+EFFCK+ LP+SI+DTHYLH+VVG
Sbjct: 1   MDPEGKSLEELFICPFGPRELTGAVDLISHFKLIPHYEFFCKRPLPVSIADTHYLHSVVG 60

Query: 250 DSEIRKGEGMQLDQLIQNTSFPRETNTRLQPFNLDILREAFQLRETAPVDLPSSEKGIPT 71
           D+E+RKG+GMQLD+LIQNTSF RET+ R+QPF+LDIL+E+FQLRETAP+DLP++EKGIPT
Sbjct: 61  DTEVRKGDGMQLDELIQNTSFSRETSARIQPFDLDILKESFQLRETAPIDLPAAEKGIPT 120

Query: 70  VAG 62
           +AG
Sbjct: 121 IAG 123


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