BLASTX nr result

ID: Atractylodes22_contig00038703 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00038703
         (553 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003609277.1| Zinc finger CCCH domain-containing protein [...   100   1e-19
ref|XP_004136190.1| PREDICTED: zinc finger CCCH domain-containin...    98   8e-19
ref|XP_003609272.1| Zinc finger CCCH domain-containing protein [...    96   4e-18
ref|XP_002304152.1| predicted protein [Populus trichocarpa] gi|2...    94   1e-17
emb|CBI33870.3| unnamed protein product [Vitis vinifera]               92   4e-17

>ref|XP_003609277.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
           gi|355510332|gb|AES91474.1| Zinc finger CCCH
           domain-containing protein [Medicago truncatula]
          Length = 270

 Score =  100 bits (250), Expect = 1e-19
 Identities = 62/213 (29%), Positives = 95/213 (44%), Gaps = 29/213 (13%)
 Frame = +1

Query: 1   KTELCLRFQRGTCDYGDRCCFAHGNGDLRGVDKRHELIAG----SRVKFWGESQNPRCSH 168
           KT +C +F+ GTC  G  C FAHG  +LR      + + G     R++    +++ +   
Sbjct: 57  KTRICTKFRFGTCRNGQNCNFAHGAEELRQPPPHWQKLVGLRSEGRMQLGNHAKDKKIIQ 116

Query: 169 KTKLCWRFMNGEKCQFGDRCHFNH------------------ITTERKSVILNMAGNGQQ 294
             KLC  + NGE+C +GD C F H                  IT E  ++  + A N Q 
Sbjct: 117 TMKLCKNYCNGEECPYGDNCIFLHEDPAQFRDDSLKLRECSAITIETNNLEGSRALNKQA 176

Query: 295 KQVPWKTRLCKRWMSAGSCTFALKCCFAHGESELQKQGSNDAQD--YTEDEPCKWVDMTY 468
           +    KT+LC+ W   G C+F + C FAHGE ELQ  G     +   T +          
Sbjct: 177 RSTYRKTKLCRNWKHTGYCSFGMNCLFAHGEEELQVPGGAIQAEAAVTIENSTNAATSPA 236

Query: 469 EKQVDGKQWEFKWKNV-----EKIGRVYADWIN 552
              V+ ++   + K +      +I R+Y DWI+
Sbjct: 237 SLLVEKEEEHVRKKRILGLKFSQINRIYGDWID 269


>ref|XP_004136190.1| PREDICTED: zinc finger CCCH domain-containing protein 12-like
           [Cucumis sativus]
          Length = 339

 Score = 98.2 bits (243), Expect = 8e-19
 Identities = 71/251 (28%), Positives = 97/251 (38%), Gaps = 67/251 (26%)
 Frame = +1

Query: 1   KTELCLRFQRGTCDYGDRCCFAHGNGDLRGVDKRHELIAGSRVK---------------- 132
           KT+LC +F+ GTC Y   C FAH   +LR      + I  +  +                
Sbjct: 89  KTKLCCKFRAGTCPYITNCNFAHSIEELRRPPHNWQEIVAAHEEEKAVLSEPREEFQIPS 148

Query: 133 -----FWGESQNPRCSHKTKLCWRFMNGEKCQFGDRCHFNHI--TTERKSVILNMAGNG- 288
                F  ESQ    S+K + C +F   E C +GD C F H   +  R+SV ++  G G 
Sbjct: 149 LGTSNFGSESQR---SYKGRHCKKFYTEEGCPYGDSCTFLHDEQSKNRESVAISFGGGGG 205

Query: 289 --------QQKQVPWKTRLCKRWMSAGSCTFALKCCFAHGESELQKQGSNDAQDYTEDEP 444
                     K   WKTR+C +W   G C F  KC FAHG +EL + G    +  T D  
Sbjct: 206 GGGSGNGSNTKPSNWKTRICNKWELTGYCPFGNKCHFAHGAAELHRYGGGLMETETRDSS 265

Query: 445 CKWVDM-----------------------------------TYEKQVDGKQWEFKWKNVE 519
               D+                                   T   Q  G++   KWK  +
Sbjct: 266 AAPPDLKQGVLPKAPGDTLVASVPSAPHSDVYHVVVPSQRSTIVIQRPGQRTHQKWKGPD 325

Query: 520 KIGRVYADWIN 552
           KI R+Y DWI+
Sbjct: 326 KISRIYGDWID 336


>ref|XP_003609272.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
           gi|355510327|gb|AES91469.1| Zinc finger CCCH
           domain-containing protein [Medicago truncatula]
          Length = 231

 Score = 95.9 bits (237), Expect = 4e-18
 Identities = 57/185 (30%), Positives = 87/185 (47%), Gaps = 1/185 (0%)
 Frame = +1

Query: 1   KTELCLRFQRGTCDYGDRCCFAHGNGDLRGVDKRHELIAGSRVKFWGESQNPRCSHKTKL 180
           KT +C +F  G C  G  C FAHG  ++R      + + G        +++ +  +K KL
Sbjct: 65  KTRICTKFIFGACRNGTNCNFAHGAEEIRQPPPNSQKLVGPC------NEDKKIINKMKL 118

Query: 181 CWRFMNGEKCQFGDRCHFNHITTERKSVILNMAGNGQQKQVPWKTRLCKRWMSAGSCTFA 360
           C ++ NGEKC +GD+C F H                Q +    KT+LC +W   G C+F 
Sbjct: 119 CKKYCNGEKCPYGDKCKFLH------------EDPAQFRGTYRKTKLCLKWKDTGYCSFG 166

Query: 361 LKCCFAHGESELQ-KQGSNDAQDYTEDEPCKWVDMTYEKQVDGKQWEFKWKNVEKIGRVY 537
             C FAHGE ELQ   G+ +A+     E    + +  E++   K+         +I R+Y
Sbjct: 167 KNCHFAHGEEELQVPGGAIEAEAAVAIEADAAITIAKEEE-QAKKKRILGLKFSQINRIY 225

Query: 538 ADWIN 552
            DWI+
Sbjct: 226 GDWID 230


>ref|XP_002304152.1| predicted protein [Populus trichocarpa] gi|222841584|gb|EEE79131.1|
           predicted protein [Populus trichocarpa]
          Length = 264

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 61/207 (29%), Positives = 90/207 (43%), Gaps = 24/207 (11%)
 Frame = +1

Query: 1   KTELCLRFQRGTCDYGDRCCFAHGNGDLRGVDKRHELIAGSRVKFWGESQNPRCSHKTKL 180
           KT+LC++F+ G C +G +C FAH   DLR      + +   R     E +N        L
Sbjct: 58  KTQLCMKFRTGHCSHGSKCLFAHAVCDLR------KALPNLRRVVVNEDKN--------L 103

Query: 181 CWRFMNGEKCQFGDRCHFNHITTERKSVILNM--------------AGNGQQKQVPWKTR 318
           C  F +G+ C +G++C F H+  E     L                A +G  K+   KTR
Sbjct: 104 CRMFNSGKGCTYGNKCRFLHVVPENFQKNLGQNWESSAISIGTTGTASSGGHKKGYKKTR 163

Query: 319 LCKRWMSAGSCTFALKCCFAHGESELQKQGSNDAQDYTEDEPCK----------WVDMTY 468
           LC  W   G C +   C FAHG+ EL+K   + A   +   P K           +   +
Sbjct: 164 LCNNWEMTGGCPYGKVCHFAHGQQELEKSDGSIAL-ASGIVPTKASNSLLMGKDGIGSNH 222

Query: 469 EKQVDGKQWEFKWKNVEKIGRVYADWI 549
           + +       FKWK ++K   +YADWI
Sbjct: 223 KHEAQATHCMFKWKALKKTRGIYADWI 249


>emb|CBI33870.3| unnamed protein product [Vitis vinifera]
          Length = 285

 Score = 92.4 bits (228), Expect = 4e-17
 Identities = 59/176 (33%), Positives = 82/176 (46%), Gaps = 28/176 (15%)
 Frame = +1

Query: 1   KTELCLRFQRGTCDYGDRCCFAHGNGDLRGVDKRHELIAGSRVKFWGESQNPR------- 159
           KT+LC +F+ GTC Y   C FAH   +LR      + I  +  +  G S  PR       
Sbjct: 83  KTKLCCKFRAGTCPYVTNCNFAHSIQELRRPPPNWQEIVAAHDEERGVSSEPREEFQIPS 142

Query: 160 -----------CSHKTKLCWRFMNGEKCQFGDRCHFNHI--TTERKSVILNM---AGNGQ 291
                       S+K + C +F   E C +GD C F H   +  R+SV +++   AG G 
Sbjct: 143 IGSSSFGVETQRSYKGRHCKKFYTDEGCPYGDNCTFLHDEQSKARESVAISLGPGAGGGG 202

Query: 292 QKQVP--WKTRLCKRWMSAGSCTFALKCCFAHGESELQKQGS---NDAQDYTEDEP 444
               P  WKTR+C +W   G C F  KC FAHG  EL + G    ++++D T   P
Sbjct: 203 SNIKPSNWKTRICNKWELTGYCPFGSKCHFAHGMGELHRYGGGLVDESRDSTSAPP 258


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