BLASTX nr result

ID: Atractylodes22_contig00038610 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00038610
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634223.1| PREDICTED: RNA pseudourine synthase 7-like i...    65   6e-09
emb|CBI15710.3| unnamed protein product [Vitis vinifera]               65   6e-09
ref|XP_004138251.1| PREDICTED: RNA pseudourine synthase 7-like [...    63   3e-08
ref|XP_002511129.1| ribosomal pseudouridine synthase, putative [...    62   4e-08
ref|XP_002321729.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08

>ref|XP_003634223.1| PREDICTED: RNA pseudourine synthase 7-like isoform 2 [Vitis
           vinifera] gi|359491114|ref|XP_002280549.2| PREDICTED:
           RNA pseudourine synthase 7-like isoform 1 [Vitis
           vinifera]
          Length = 386

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 41/83 (49%), Positives = 44/83 (53%)
 Frame = +2

Query: 14  VHPCGQYRKNTVVGILQAEHDLAPLFRILLFIWQLPSCTTFHLFSGSLF*I*KYLLFLN* 193
           VHPCGQYRKNTVVGILQAEH LAPLF                                  
Sbjct: 136 VHPCGQYRKNTVVGILQAEHGLAPLF---------------------------------- 161

Query: 194 TKSIYQLDCLVSGLLILARSASQ 262
              I++LD LVSGLLILARSAS+
Sbjct: 162 --PIHRLDRLVSGLLILARSASK 182


>emb|CBI15710.3| unnamed protein product [Vitis vinifera]
          Length = 374

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 41/83 (49%), Positives = 44/83 (53%)
 Frame = +2

Query: 14  VHPCGQYRKNTVVGILQAEHDLAPLFRILLFIWQLPSCTTFHLFSGSLF*I*KYLLFLN* 193
           VHPCGQYRKNTVVGILQAEH LAPLF                                  
Sbjct: 126 VHPCGQYRKNTVVGILQAEHGLAPLF---------------------------------- 151

Query: 194 TKSIYQLDCLVSGLLILARSASQ 262
              I++LD LVSGLLILARSAS+
Sbjct: 152 --PIHRLDRLVSGLLILARSASK 172


>ref|XP_004138251.1| PREDICTED: RNA pseudourine synthase 7-like [Cucumis sativus]
           gi|449501468|ref|XP_004161375.1| PREDICTED: RNA
           pseudourine synthase 7-like [Cucumis sativus]
          Length = 393

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 39/83 (46%), Positives = 44/83 (53%)
 Frame = +2

Query: 14  VHPCGQYRKNTVVGILQAEHDLAPLFRILLFIWQLPSCTTFHLFSGSLF*I*KYLLFLN* 193
           VHPCGQYRKNTVVGIL+AEH LAPLF                                  
Sbjct: 144 VHPCGQYRKNTVVGILEAEHGLAPLF---------------------------------- 169

Query: 194 TKSIYQLDCLVSGLLILARSASQ 262
              I++LD LVSGLLILAR+AS+
Sbjct: 170 --PIHRLDRLVSGLLILARNASK 190


>ref|XP_002511129.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
           gi|223550244|gb|EEF51731.1| ribosomal pseudouridine
           synthase, putative [Ricinus communis]
          Length = 385

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 38/81 (46%), Positives = 43/81 (53%)
 Frame = +2

Query: 14  VHPCGQYRKNTVVGILQAEHDLAPLFRILLFIWQLPSCTTFHLFSGSLF*I*KYLLFLN* 193
           VHPCGQYRKNTVVGILQAEH+LAPLF                                  
Sbjct: 138 VHPCGQYRKNTVVGILQAEHNLAPLF---------------------------------- 163

Query: 194 TKSIYQLDCLVSGLLILARSA 256
              +++LD LVSGLLILAR+A
Sbjct: 164 --PVHRLDRLVSGLLILARNA 182


>ref|XP_002321729.1| predicted protein [Populus trichocarpa] gi|222868725|gb|EEF05856.1|
           predicted protein [Populus trichocarpa]
          Length = 388

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 37/83 (44%), Positives = 44/83 (53%)
 Frame = +2

Query: 14  VHPCGQYRKNTVVGILQAEHDLAPLFRILLFIWQLPSCTTFHLFSGSLF*I*KYLLFLN* 193
           VHPCGQYRKNTVVG+LQAEH LAPLF                                  
Sbjct: 141 VHPCGQYRKNTVVGVLQAEHGLAPLF---------------------------------- 166

Query: 194 TKSIYQLDCLVSGLLILARSASQ 262
              +++LD LVSGLLILAR+A++
Sbjct: 167 --PVHRLDRLVSGLLILARNATR 187


Top