BLASTX nr result

ID: Atractylodes22_contig00038585 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00038585
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAU04618.1| CENP-C [Solanum tuberosum]                              70   2e-10
emb|CBI36186.3| unnamed protein product [Vitis vinifera]               70   2e-10
ref|XP_002280442.2| PREDICTED: uncharacterized protein LOC100244...    64   2e-08
dbj|BAI48085.1| centromere protein C [Nicotiana tomentosiformis]       60   2e-07
dbj|BAI48084.1| centromere protein C homologue [Nicotiana tabacum]     60   2e-07

>gb|AAU04618.1| CENP-C [Solanum tuberosum]
          Length = 384

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 47/119 (39%), Positives = 68/119 (57%), Gaps = 6/119 (5%)
 Frame = -3

Query: 340 QRQRGGEDLNEVEIS---MNARRRRPEISRRKVTYKHHEYSTNSES--AMLSSQEILQDD 176
           +RQ+G   +++ +++    NARRRRP I  + V YKH   ST  E+  A +SSQE L+DD
Sbjct: 157 ERQKGSS-IHDPDVNNPPANARRRRPGILGKSVKYKHRFSSTQPENDDAFISSQETLEDD 215

Query: 175 IRNPPTDDSEQEAAIFN-NSQDQKLAGPVNKTEKRLNEIFDELISSDIHKLDGNEALSR 2
           I         +E    N   Q+ +L G V KTE R+N+I DEL+S     LD + A+S+
Sbjct: 216 ILVEHGSQLPEELHGLNVELQEAELTGSVKKTENRINKILDELLSGSDEDLDRDMAVSK 274


>emb|CBI36186.3| unnamed protein product [Vitis vinifera]
          Length = 899

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 44/117 (37%), Positives = 69/117 (58%), Gaps = 5/117 (4%)
 Frame = -3

Query: 340 QRQRGGE--DLNEVEISMNARRRRPEISRRKVTYKHHEYS--TNSESAMLSSQEILQDDI 173
           QRQRGG   DLN+  +S  AR RRP I  R V+YKHH  S  ++++  ++ S   ++  I
Sbjct: 157 QRQRGGVLMDLNQYNLSTTARHRRPGILGRSVSYKHHYSSLVSDNDENLMPSPATVEQMI 216

Query: 172 RNPPTDDSEQEAAIFNNS-QDQKLAGPVNKTEKRLNEIFDELISSDIHKLDGNEALS 5
            +P    S+ E    N + Q+++L   V + E +++EI DEL+S +   LDG+ AL+
Sbjct: 217 VSPSNYSSQVEMVDPNVALQERELTVSVTQAENKVDEILDELLSGNCEDLDGDGALT 273


>ref|XP_002280442.2| PREDICTED: uncharacterized protein LOC100244530 [Vitis vinifera]
          Length = 949

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 44/132 (33%), Positives = 68/132 (51%), Gaps = 20/132 (15%)
 Frame = -3

Query: 340 QRQRGGE--DLNEVEISMNARRRRPEISRRKVTYKHHEYS--TNSESAMLSSQEILQDDI 173
           QRQRGG   DLN+  +S  AR RRP I  R V+YKHH  S  ++++  ++ S   ++  I
Sbjct: 180 QRQRGGVLMDLNQYNLSTTARHRRPGILGRSVSYKHHYSSLVSDNDENLMPSPATVEQMI 239

Query: 172 RNPPTDDSEQEAAIFN----------------NSQDQKLAGPVNKTEKRLNEIFDELISS 41
            +P    S+ E    N                 S +++L   V + E +++EI DEL+S 
Sbjct: 240 VSPSNYSSQVEMVDPNVALQERELTETVDPSVESLERELTVSVTQAENKVDEILDELLSG 299

Query: 40  DIHKLDGNEALS 5
           +   LDG+ AL+
Sbjct: 300 NCEDLDGDGALT 311


>dbj|BAI48085.1| centromere protein C [Nicotiana tomentosiformis]
          Length = 714

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 46/110 (41%), Positives = 58/110 (52%), Gaps = 3/110 (2%)
 Frame = -3

Query: 322 EDLNEVEISMNARRRRPEISRRKVTYKHHEYSTNSES--AMLSSQEILQDDIRNPPTDDS 149
           ED+N+     NARRRRP I  + V YKH   S  SE+  A +SSQE L  DIR       
Sbjct: 161 EDVNDPPA--NARRRRPGILNKSVRYKHRFSSIESENDDAFISSQETLGSDIRAGQNSQL 218

Query: 148 EQEAAIFN-NSQDQKLAGPVNKTEKRLNEIFDELISSDIHKLDGNEALSR 2
            +E    N   Q+    G V KTE   N I +EL+SS+   L+G  ALS+
Sbjct: 219 PEEPPGLNVELQEADSPGSVEKTEN--NGILNELLSSNGGDLNGGMALSK 266


>dbj|BAI48084.1| centromere protein C homologue [Nicotiana tabacum]
          Length = 714

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 46/110 (41%), Positives = 58/110 (52%), Gaps = 3/110 (2%)
 Frame = -3

Query: 322 EDLNEVEISMNARRRRPEISRRKVTYKHHEYSTNSES--AMLSSQEILQDDIRNPPTDDS 149
           ED+N+     NARRRRP I  + V YKH   S  SE+  A +SSQE L  DIR       
Sbjct: 161 EDVNDPPA--NARRRRPGILNKSVRYKHRFSSIESENDDAFISSQETLGSDIRAGQNSQL 218

Query: 148 EQEAAIFN-NSQDQKLAGPVNKTEKRLNEIFDELISSDIHKLDGNEALSR 2
            +E    N   Q+    G V KTE   N I +EL+SS+   L+G  ALS+
Sbjct: 219 PEEPPGLNVELQEADSPGSVEKTEN--NGILNELLSSNGGDLNGGMALSK 266


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