BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00038517
         (457 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA22288.1| polyprotein [Oryza australiensis]                     234   5e-60
gb|ADB85430.1| putative retrotransposon protein [Phyllostachys e...   232   3e-59
gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa...   231   5e-59
gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subc...   231   5e-59
gb|ABG22008.1| retrotransposon protein, putative, Ty1-copia subc...   229   2e-58

>dbj|BAA22288.1| polyprotein [Oryza australiensis]
          Length = 1317

 Score =  234 bits (597), Expect = 5e-60
 Identities = 115/157 (73%), Positives = 135/157 (85%), Gaps = 5/157 (3%)
 Frame = +1

Query: 1    YASAIGS-----LCTRPDVSHALSMTSRYQSNPGEAHWVAVKNILKYLRKTKDMFLLYGG 165
            YASAIGS     LCTRPDVS+ALS TSRYQS+PGE HW AVKNILKYLR+TKDMFL+YGG
Sbjct: 1094 YASAIGSIMYAMLCTRPDVSYALSATSRYQSDPGEGHWTAVKNILKYLRRTKDMFLVYGG 1153

Query: 166  TERDLCVRGYSDASFQTDRDDLKSQSGYVFVLNGGAVSWKSYKQSTTADSTTESEYLAAS 345
             E DL V GY+DASFQTD+DD +SQSG+VF LNGGAVSWKS KQ T ADSTTE+EY+AAS
Sbjct: 1154 -EEDLVVSGYTDASFQTDKDDYRSQSGFVFCLNGGAVSWKSSKQDTVADSTTEAEYIAAS 1212

Query: 346  DAAKEAVWMKKFITDLGVVPSISDPVEIHCDNEGAIA 456
            +AAKEAVW+KKF+++LGV+ S + P+ ++CDN GAIA
Sbjct: 1213 EAAKEAVWIKKFVSELGVMTSTTGPMSLYCDNSGAIA 1249


>gb|ADB85430.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 896

 Score =  232 bits (591), Expect = 3e-59
 Identities = 111/157 (70%), Positives = 136/157 (86%), Gaps = 5/157 (3%)
 Frame = +1

Query: 1    YASAIGSL-----CTRPDVSHALSMTSRYQSNPGEAHWVAVKNILKYLRKTKDMFLLYGG 165
            YASAIGS+     CTRPDVS+ALS+TSRYQ++P E HW AVKNILKYLR+TKD+FL+YGG
Sbjct: 674  YASAIGSIMYAMICTRPDVSYALSVTSRYQADPSEGHWTAVKNILKYLRRTKDVFLVYGG 733

Query: 166  TERDLCVRGYSDASFQTDRDDLKSQSGYVFVLNGGAVSWKSYKQSTTADSTTESEYLAAS 345
             E +L V GY+DASFQTD+DD +SQSG+VF+LNGGAVSWKS KQ T ADSTTE+EY+AAS
Sbjct: 734  DE-ELVVNGYTDASFQTDKDDYRSQSGFVFILNGGAVSWKSSKQETVADSTTEAEYIAAS 792

Query: 346  DAAKEAVWMKKFITDLGVVPSISDPVEIHCDNEGAIA 456
            +AAKE VW++ FIT+LG+VPS S P++++CDN GAIA
Sbjct: 793  EAAKEGVWIRNFITELGMVPSASSPMDLYCDNNGAIA 829


>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
            19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1|
            putative retrotransposon protein [Arabidopsis thaliana]
          Length = 964

 Score =  231 bits (589), Expect = 5e-59
 Identities = 113/157 (71%), Positives = 136/157 (86%), Gaps = 5/157 (3%)
 Frame = +1

Query: 1    YASAIGS-----LCTRPDVSHALSMTSRYQSNPGEAHWVAVKNILKYLRKTKDMFLLYGG 165
            YASAIGS     L TRPDV+ ALSMTSRYQS+PGE+HW+ V+NI KYLR+TKD FL+YGG
Sbjct: 741  YASAIGSIMYAMLYTRPDVACALSMTSRYQSDPGESHWIVVRNIFKYLRRTKDKFLVYGG 800

Query: 166  TERDLCVRGYSDASFQTDRDDLKSQSGYVFVLNGGAVSWKSYKQSTTADSTTESEYLAAS 345
            +E +L V GY+DASFQTD+DD +SQSG+ F LNGGAVSWKS KQST ADSTTE+EY+AAS
Sbjct: 801  SE-ELVVSGYTDASFQTDKDDFRSQSGFFFCLNGGAVSWKSTKQSTVADSTTEAEYIAAS 859

Query: 346  DAAKEAVWMKKFITDLGVVPSISDPVEIHCDNEGAIA 456
            +AAKE VW++KFIT+LGVVPSIS P++++CDN GAIA
Sbjct: 860  EAAKEVVWIRKFITELGVVPSISGPIDLYCDNNGAIA 896


>gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1050

 Score =  231 bits (589), Expect = 5e-59
 Identities = 112/157 (71%), Positives = 135/157 (85%), Gaps = 5/157 (3%)
 Frame = +1

Query: 1    YASAIGS-----LCTRPDVSHALSMTSRYQSNPGEAHWVAVKNILKYLRKTKDMFLLYGG 165
            YASAIGS     LCT PDVS+ALS TSRYQS+PGE+HW+AVKNILKYLR+TKDMFL+YGG
Sbjct: 828  YASAIGSIMYAMLCTHPDVSYALSATSRYQSDPGESHWIAVKNILKYLRRTKDMFLVYGG 887

Query: 166  TERDLCVRGYSDASFQTDRDDLKSQSGYVFVLNGGAVSWKSYKQSTTADSTTESEYLAAS 345
             E +L V+GY+DASFQTD+DD +SQSG+VF LNGGAVSWKS KQ T  DS TE+EY+AAS
Sbjct: 888  QE-ELVVKGYTDASFQTDKDDFRSQSGFVFCLNGGAVSWKSSKQDTVVDSITEAEYIAAS 946

Query: 346  DAAKEAVWMKKFITDLGVVPSISDPVEIHCDNEGAIA 456
            +AAKEAVW+KKF++ LGV+ S S P++++CDN GAIA
Sbjct: 947  EAAKEAVWIKKFVSQLGVMTSASSPMDLYCDNSGAIA 983


>gb|ABG22008.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 932

 Score =  229 bits (584), Expect = 2e-58
 Identities = 111/157 (70%), Positives = 134/157 (85%), Gaps = 5/157 (3%)
 Frame = +1

Query: 1    YASAIGS-----LCTRPDVSHALSMTSRYQSNPGEAHWVAVKNILKYLRKTKDMFLLYGG 165
            YASAIGS     LCTRPDV +ALS TS+YQS+PGE+HW+AVKNILKYLR+TKDMFL+YGG
Sbjct: 718  YASAIGSIMYAMLCTRPDVPYALSATSQYQSDPGESHWIAVKNILKYLRRTKDMFLIYGG 777

Query: 166  TERDLCVRGYSDASFQTDRDDLKSQSGYVFVLNGGAVSWKSYKQSTTADSTTESEYLAAS 345
             E +L V  Y+DASFQTD+DD +SQSG+VF LNGGAVSWKS KQ T ADSTTE+EY+AAS
Sbjct: 778  QE-ELVVNNYTDASFQTDKDDFRSQSGFVFCLNGGAVSWKSSKQDTVADSTTEAEYIAAS 836

Query: 346  DAAKEAVWMKKFITDLGVVPSISDPVEIHCDNEGAIA 456
            +AAKEA W+KKF++ LGV+ S S P++++CDN GAIA
Sbjct: 837  EAAKEAAWIKKFVSQLGVMTSASSPMDLYCDNSGAIA 873