BLASTX nr result

ID: Atractylodes22_contig00038509 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00038509
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB70511.1| Myb [Nicotiana tabacum]                                67   1e-09
ref|XP_002309557.1| predicted protein [Populus trichocarpa] gi|2...    65   6e-09
dbj|BAB70510.1| Myb [Nicotiana tabacum]                                64   1e-08
ref|XP_002324814.1| predicted protein [Populus trichocarpa] gi|2...    58   9e-07

>dbj|BAB70511.1| Myb [Nicotiana tabacum]
          Length = 1042

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 43/134 (32%), Positives = 71/134 (52%), Gaps = 26/134 (19%)
 Frame = -2

Query: 326 TSSWVQQNSVDESIPNDVTETDDISDCSQSSTFGGCSKATSVMSNAIAVYSQNE------ 165
           +S+ +QQ+S D+S+  + TE ++ S+CSQ S   GCS++TS M N   V+++ E      
Sbjct: 216 SSAKLQQSSEDDSVRKEGTEMEEASECSQGSNLAGCSQSTSDMGNKF-VHTREEGKLLED 274

Query: 164 ----TQPAENSYPSS---------------GLPCELSDPSKMVEQCFSHDWVTS-DKDWQ 45
                 P+ +S P S                +P EL D SK++E  FSHDW  S  K+WQ
Sbjct: 275 SNYRKDPSSSSAPCSEYYTPAFEDITFSMAEVPSEL-DESKLLEHTFSHDWAASIGKEWQ 333

Query: 44  ISSNELQKLASADL 3
            + +++  ++  +L
Sbjct: 334 FNPDDIPNISPLEL 347


>ref|XP_002309557.1| predicted protein [Populus trichocarpa] gi|222855533|gb|EEE93080.1|
           predicted protein [Populus trichocarpa]
          Length = 1027

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 41/117 (35%), Positives = 61/117 (52%), Gaps = 17/117 (14%)
 Frame = -2

Query: 302 SVDESIPNDVTETDDISDCSQSSTFGGCSKATSVMSNAIAVYSQNETQPAENS------- 144
           S D++      E +DIS+CSQ ST GGCS++ S + NA+  +++ E Q AE S       
Sbjct: 227 SGDDNAQRGGAEAEDISECSQESTIGGCSQSASDLGNAV-FHTREEFQLAEESGLRKEQS 285

Query: 143 ---------YPSSGLPCELSDPSKMVEQCFSHDWVTS-DKDWQISSNELQKLASADL 3
                    Y    +PCEL   S  ++Q FSH+ +TS   D+Q    EL  ++S +L
Sbjct: 286 SSPASCSEQYYIPEMPCELGGSSNFLQQNFSHNTLTSVSSDYQFELQELPNVSSLEL 342


>dbj|BAB70510.1| Myb [Nicotiana tabacum]
          Length = 1003

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 40/129 (31%), Positives = 63/129 (48%), Gaps = 25/129 (19%)
 Frame = -2

Query: 326 TSSWVQQNSVDESIPNDVTETDDISDCSQSSTFGGCSKATSVMSNAIAVYSQN----ETQ 159
           +S  +QQNS DES+  +  E +++ +CSQ S F GCS++TS + N      +N    E  
Sbjct: 272 SSMTLQQNSEDESVHKEGMEAEEVPECSQGSNFAGCSQSTSDLGNTFVHIRENGGMSEES 331

Query: 158 PAENSYPSSGLPC--------------------ELSDPSKMVEQCFSHDWVTS-DKDWQI 42
             +    SS  PC                    EL+D SK +E   SHDW  S ++DWQ 
Sbjct: 332 ICKKDATSSTAPCCRNYSPVFQDVSCSMLKVPSELAD-SKFLEHNLSHDWGNSMEEDWQF 390

Query: 41  SSNELQKLA 15
           + +++  ++
Sbjct: 391 NRDDIPNIS 399


>ref|XP_002324814.1| predicted protein [Populus trichocarpa] gi|222866248|gb|EEF03379.1|
           predicted protein [Populus trichocarpa]
          Length = 1027

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 39/125 (31%), Positives = 63/125 (50%), Gaps = 17/125 (13%)
 Frame = -2

Query: 326 TSSWVQQNSVDESIPNDVTETDDISDCSQSSTFGGCSKATSVMSNAIAVYSQNETQPAEN 147
           +SS    +S D++     +E +DIS+CSQ ST  GCS++      A+  +++ E Q AE 
Sbjct: 220 SSSSRLHSSGDDNAQRGGSEAEDISECSQESTMVGCSQSAGDQGIAV-FHTREEFQFAEE 278

Query: 146 SYPSS----------------GLPCELSDPSKMVEQCFSHDWVTS-DKDWQISSNELQKL 18
           S P                   +PCEL   S  ++Q FSH+ +TS + D+Q    EL  +
Sbjct: 279 SGPRKEQSSSPASCSEQYYIPEMPCELGGSSNFLQQSFSHNTLTSANSDYQFELQELPNI 338

Query: 17  ASADL 3
           ++ +L
Sbjct: 339 STLEL 343


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