BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00038434
         (531 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hop...   133   1e-29
dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis t...   131   5e-29
gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsi...   128   6e-28
emb|CAN60374.1| hypothetical protein VITISV_001215 [Vitis vinifera]   127   1e-27
gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsi...   126   2e-27

>gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hopscotch polyprotein
           (gb|U12626) [Arabidopsis thaliana]
          Length = 1315

 Score =  133 bits (335), Expect = 1e-29
 Identities = 70/166 (42%), Positives = 98/166 (59%), Gaps = 1/166 (0%)
 Frame = -2

Query: 506 SPV*MDLTLGRMIGTAKRLKELGTSMCWEFAFSSSIASKNDFGFCNATIVSSDLWHFRLG 327
           S V  D T   M+G  K++  L     +     S      D     A++ S DLWH RLG
Sbjct: 358 SCVLQDATRELMVGMGKQVANL-----YIVDLDSLSHPGTDSSITVASVTSHDLWHKRLG 412

Query: 326 HPSLQKLNIMRNTL-YNIKFHSKDFHCPTCHFAKQHRLPFPSSSSISAKPFDLLHIDVWG 150
           HPS+QKL  M + L +  + ++ DFHC  CH +KQ  LPF S ++ S++PFDL+HID WG
Sbjct: 413 HPSVQKLQPMSSLLSFPKQKNNTDFHCRVCHISKQKHLPFVSHNNKSSRPFDLIHIDTWG 472

Query: 149 PFNHITTEGFKYFFTLVDDNSRFTWTYFLKNKGEVDSIFIEFYNLV 12
           PF+  T +G++YF T+VDD SR TW Y L+NK +V ++   F  +V
Sbjct: 473 PFSVQTHDGYRYFLTIVDDYSRATWVYLLRNKSDVLTVIPTFVTMV 518


>dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1475

 Score =  131 bits (330), Expect = 5e-29
 Identities = 67/143 (46%), Positives = 88/143 (61%), Gaps = 1/143 (0%)
 Frame = -2

Query: 428 CWEFAFSSSIASKNDFGFCNATIVSSDLWHFRLGHPSLQKLNIMRNTLYNIKFHSKDF-H 252
           C     +SS+  K    +CNA +V S LWH RLGHPS +K +++ + L   K + +D  H
Sbjct: 562 CTSVDINSSVTEKQ---YCNA-VVDSALWHSRLGHPSYEKNDVLHDVLGLPKRNKEDLVH 617

Query: 251 CPTCHFAKQHRLPFPSSSSISAKPFDLLHIDVWGPFNHITTEGFKYFFTLVDDNSRFTWT 72
           C  C  AKQ  L FPS +++S   FDL+HID WGPF   TTEG+KYF T+VDD SR TW 
Sbjct: 618 CSICQKAKQKHLSFPSKNNMSENKFDLIHIDTWGPFATPTTEGYKYFLTIVDDYSRATWV 677

Query: 71  YFLKNKGEVDSIFIEFYNLVMVQ 3
           Y +K K +V  IF +F  +V  Q
Sbjct: 678 YLMKAKNDVLQIFPDFLKMVETQ 700


>gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1454

 Score =  128 bits (321), Expect = 6e-28
 Identities = 69/162 (42%), Positives = 93/162 (57%), Gaps = 2/162 (1%)
 Frame = -2

Query: 491 DLTLGRMIGTAKRLKELGTSMCWEFAFSSSIASKNDFGFCNATIVSSDLWHFRLGHPSLQ 312
           DL  GRM+G  +R+  L             +    D       +V   +WH RLGH SLQ
Sbjct: 521 DLIKGRMLGQGRRVANL------------YLLDVGDQSISVNAVVDISMWHRRLGHASLQ 568

Query: 311 KLNIMRNTLYNIKFHSK--DFHCPTCHFAKQHRLPFPSSSSISAKPFDLLHIDVWGPFNH 138
           +L+ + ++L   +  +K  DF C  CH AKQ +L FP+S+ +  + FDLLHIDVWGPF+ 
Sbjct: 569 RLDAISDSLGTTRHKNKGSDF-CHVCHLAKQRKLSFPTSNKVCKEIFDLLHIDVWGPFSV 627

Query: 137 ITTEGFKYFFTLVDDNSRFTWTYFLKNKGEVDSIFIEFYNLV 12
            T EG+KYF T+VDD+SR TW Y LK K EV ++F  F   V
Sbjct: 628 ETVEGYKYFLTIVDDHSRATWMYLLKTKSEVLTVFPAFIQQV 669


>emb|CAN60374.1| hypothetical protein VITISV_001215 [Vitis vinifera]
          Length = 1535

 Score =  127 bits (318), Expect = 1e-27
 Identities = 66/165 (40%), Positives = 90/165 (54%), Gaps = 2/165 (1%)
 Frame = -2

Query: 491 DLTLGRMIGTAKRLKELG--TSMCWEFAFSSSIASKNDFGFCNATIVSSDLWHFRLGHPS 318
           DL   RMIG  K+   L    ++      ++S +S N    CN T  S+DLWH RLGH S
Sbjct: 497 DLATRRMIGLGKQRDGLYYLAALTTNKTETNSYSSPNRPPTCNLTTSSTDLWHSRLGHVS 556

Query: 317 LQKLNIMRNTLYNIKFHSKDFHCPTCHFAKQHRLPFPSSSSISAKPFDLLHIDVWGPFNH 138
             +L+ +     N      +  CP C  AKQHRLPF +S   S KPFDL+H D+WG + H
Sbjct: 557 HSRLSFIAKNFLNFSIQFNN-DCPICLLAKQHRLPFGTSEISSEKPFDLIHCDIWGRYKH 615

Query: 137 ITTEGFKYFFTLVDDNSRFTWTYFLKNKGEVDSIFIEFYNLVMVQ 3
            +  G  YF T+VDD +RFTW + +K+K E   +   F++ V  Q
Sbjct: 616 SSLSGAHYFLTIVDDYTRFTWIFLMKHKDEAQPLIKHFFSYVSTQ 660


>gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1461

 Score =  126 bits (317), Expect = 2e-27
 Identities = 68/161 (42%), Positives = 93/161 (57%), Gaps = 1/161 (0%)
 Frame = -2

Query: 491 DLTLGRMIGTAKRLKELGTSMCWEFAFSSSIASKNDFGFCNATIVSSDLWHFRLGHPSLQ 312
           DLT G  +G  KR+  L     +     S   S N        +V   +WH RLGHPS  
Sbjct: 532 DLTKGLTLGEGKRIGNL-----YVLDTQSPAISVN-------AVVDVSVWHKRLGHPSFS 579

Query: 311 KLNIMRNTLYNIKF-HSKDFHCPTCHFAKQHRLPFPSSSSISAKPFDLLHIDVWGPFNHI 135
           +L+ +   L   +  + K  +C  CH AKQ +L FPS+++I    F+LLHIDVWGPF+  
Sbjct: 580 RLDSLSEVLGTTRHKNKKSAYCHVCHLAKQKKLSFPSANNICNSTFELLHIDVWGPFSVE 639

Query: 134 TTEGFKYFFTLVDDNSRFTWTYFLKNKGEVDSIFIEFYNLV 12
           T EG+KYF T+VDD+SR TW Y LK+K +V ++F  F +LV
Sbjct: 640 TVEGYKYFLTIVDDHSRATWIYLLKSKSDVLTVFPAFIDLV 680