BLASTX nr result

ID: Atractylodes22_contig00038424 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00038424
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACY01928.1| hypothetical protein [Beta vulgaris]                   197   7e-49
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   195   4e-48
gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...   183   1e-44
dbj|BAG72154.1| hypothetical protein [Lotus japonicus]                180   1e-43
dbj|BAG72152.1| hypothetical protein [Lotus japonicus]                180   1e-43

>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score =  197 bits (501), Expect = 7e-49
 Identities = 97/135 (71%), Positives = 108/135 (80%)
 Frame = -2

Query: 407  FRLPDGLPPRRTKEHAILLKQGHDPVSVRPYRYPQSQKDEIERLIHDMLTAGIIRXXXXX 228
            F +P GLPP R   HAI L+ G +PVSVRPYRYPQSQKDEIE+LIHDML AGII+     
Sbjct: 599  FNMPLGLPPDRGHVHAINLQHGTNPVSVRPYRYPQSQKDEIEQLIHDMLAAGIIQQSHSA 658

Query: 227  XXXXXXXVKKKDGSWRFCVDYRALNRVTVPDKYPIPVIDELLDELHGSKVFTKLDLKSGY 48
                   VKKKDGSWRFCVDYRALN VTVPDKYPIP+IDELLDELHG+ VF+KLDLKSGY
Sbjct: 659  FSSPVLLVKKKDGSWRFCVDYRALNNVTVPDKYPIPIIDELLDELHGACVFSKLDLKSGY 718

Query: 47   HQIRVKEEDISKTAF 3
            HQI++K  D+ KTAF
Sbjct: 719  HQIKMKPSDVHKTAF 733


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  195 bits (495), Expect = 4e-48
 Identities = 96/135 (71%), Positives = 107/135 (79%)
 Frame = -2

Query: 407  FRLPDGLPPRRTKEHAILLKQGHDPVSVRPYRYPQSQKDEIERLIHDMLTAGIIRXXXXX 228
            F  P GLPPRR  EHAI+LK+G +PV VRPYRYPQ QKDEIERLI +ML AGII+     
Sbjct: 667  FETPVGLPPRRGHEHAIVLKEGSNPVGVRPYRYPQFQKDEIERLIKEMLAAGIIQPSTSP 726

Query: 227  XXXXXXXVKKKDGSWRFCVDYRALNRVTVPDKYPIPVIDELLDELHGSKVFTKLDLKSGY 48
                   VKKKDGSWRFCVDYRALN+ TVPDKYPIPVIDELLDELHG+ VF+KLDL++GY
Sbjct: 727  FSSPVILVKKKDGSWRFCVDYRALNKETVPDKYPIPVIDELLDELHGATVFSKLDLRAGY 786

Query: 47   HQIRVKEEDISKTAF 3
            HQI V+ ED  KTAF
Sbjct: 787  HQILVRPEDTHKTAF 801


>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
           finger, CCHC-type; Peptidase aspartic, active site;
           Polynucleotidyl transferase, Ribonuclease H fold
           [Medicago truncatula]
          Length = 1297

 Score =  183 bits (464), Expect = 1e-44
 Identities = 86/135 (63%), Positives = 104/135 (77%)
 Frame = -2

Query: 407 FRLPDGLPPRRTKEHAILLKQGHDPVSVRPYRYPQSQKDEIERLIHDMLTAGIIRXXXXX 228
           F+ P GLPP+R KEH I LK+G   V+VRPYRYP   K+EIE+ + +ML AGIIR     
Sbjct: 358 FQEPTGLPPKRKKEHVITLKEGEGAVNVRPYRYPHHHKNEIEKQVREMLQAGIIRHSTSS 417

Query: 227 XXXXXXXVKKKDGSWRFCVDYRALNRVTVPDKYPIPVIDELLDELHGSKVFTKLDLKSGY 48
                  VK+KD SWR C+DYRALN+ TVPDK+PIPVI+ELLDELHG++ ++KLDLKSGY
Sbjct: 418 FSSPVILVKEKDNSWRMCIDYRALNKATVPDKFPIPVIEELLDELHGARFYSKLDLKSGY 477

Query: 47  HQIRVKEEDISKTAF 3
           HQ+RVKEEDI KTAF
Sbjct: 478 HQVRVKEEDIHKTAF 492


>dbj|BAG72154.1| hypothetical protein [Lotus japonicus]
          Length = 1558

 Score =  180 bits (456), Expect = 1e-43
 Identities = 86/135 (63%), Positives = 105/135 (77%)
 Frame = -2

Query: 407  FRLPDGLPPRRTKEHAILLKQGHDPVSVRPYRYPQSQKDEIERLIHDMLTAGIIRXXXXX 228
            F+ P GLPPRRT +HAI L++G    ++RPYRYP  QK+EIE+L+ +ML +GIIR     
Sbjct: 601  FQEPKGLPPRRTTDHAIQLQEGASIPNIRPYRYPFYQKNEIEKLVKEMLNSGIIRHSTSP 660

Query: 227  XXXXXXXVKKKDGSWRFCVDYRALNRVTVPDKYPIPVIDELLDELHGSKVFTKLDLKSGY 48
                   VKKKDG WRFCVDYRALN+ T+PDK+PIP+IDELLDE+  + VF+KLDLKSGY
Sbjct: 661  FSSPAILVKKKDGGWRFCVDYRALNKATIPDKFPIPIIDELLDEIGAAVVFSKLDLKSGY 720

Query: 47   HQIRVKEEDISKTAF 3
            HQIR+KEEDI KTAF
Sbjct: 721  HQIRMKEEDIPKTAF 735


>dbj|BAG72152.1| hypothetical protein [Lotus japonicus]
          Length = 1369

 Score =  180 bits (456), Expect = 1e-43
 Identities = 86/135 (63%), Positives = 105/135 (77%)
 Frame = -2

Query: 407 FRLPDGLPPRRTKEHAILLKQGHDPVSVRPYRYPQSQKDEIERLIHDMLTAGIIRXXXXX 228
           F+ P GLPPRRT +HAI L++G    ++RPYRYP  QK+EIE+L+ +ML +GIIR     
Sbjct: 412 FQEPKGLPPRRTTDHAIQLQEGASIPNIRPYRYPFYQKNEIEKLVKEMLNSGIIRHSTSP 471

Query: 227 XXXXXXXVKKKDGSWRFCVDYRALNRVTVPDKYPIPVIDELLDELHGSKVFTKLDLKSGY 48
                  VKKKDG WRFCVDYRALN+ T+PDK+PIP+IDELLDE+  + VF+KLDLKSGY
Sbjct: 472 FSSPAILVKKKDGGWRFCVDYRALNKATIPDKFPIPIIDELLDEIGAAVVFSKLDLKSGY 531

Query: 47  HQIRVKEEDISKTAF 3
           HQIR+KEEDI KTAF
Sbjct: 532 HQIRMKEEDIPKTAF 546


Top