BLASTX nr result

ID: Atractylodes22_contig00038401 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00038401
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD99221.1| polypepetide with reverse transcriptase and RNas...    67   7e-11
emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]    60   2e-07
gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|...    52   2e-06
gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group...    52   4e-06

>dbj|BAD99221.1| polypepetide with reverse transcriptase and RNaseH domains [Petunia
           x hybrida]
          Length = 389

 Score = 67.0 bits (162), Expect(2) = 7e-11
 Identities = 35/76 (46%), Positives = 49/76 (64%)
 Frame = -2

Query: 305 P*QVCKVQNSLHGLKQA*RQRYVKLSTALKTRGYQNSDNGFYLLYNKVIGFIVFVVVHQG 126
           P  VC+++ SL+GLKQA RQ Y +LS+AL TRG+ +S N + L Y    G I  +VV+  
Sbjct: 12  PSHVCRLRKSLYGLKQASRQWYARLSSALGTRGFSSSMNDYSLFYKGSAGLITILVVYVD 71

Query: 125 DILLTRNRLKQMIKLK 78
           DIL+T N   ++  LK
Sbjct: 72  DILITGNNHTEISALK 87



 Score = 24.6 bits (52), Expect(2) = 7e-11
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -3

Query: 79  SKLESEFKSNNLGNPHCFSGIEIL 8
           S L+SEF+  +LG    F G+EIL
Sbjct: 88  SFLDSEFRIKDLGEVSYFLGMEIL 111


>emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]
          Length = 1523

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 35/94 (37%), Positives = 55/94 (58%)
 Frame = -2

Query: 356  LDEDI*HKAPS*DGAL*P*QVCKVQNSLHGLKQA*RQRYVKLSTALKTRGYQNSDNGFYL 177
            L ED+  + P   G     +VCK+  SL+GLKQA RQ ++KLS+ALK  G++ S + + L
Sbjct: 1087 LYEDVYMQLPPGFGRKGEHRVCKLHKSLYGLKQASRQWFLKLSSALKAAGFKQSWSDYSL 1146

Query: 176  LYNKVIGFIVFVVVHQGDILLTRNRLKQMIKLKQ 75
                  G    ++V+  D++L  N L+ +I+ KQ
Sbjct: 1147 FXRNTQGRFTTLLVYVDDVILAGNSLEDIIETKQ 1180


>gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group]
            gi|52353503|gb|AAU44069.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1447

 Score = 52.4 bits (124), Expect(2) = 2e-06
 Identities = 29/77 (37%), Positives = 44/77 (57%)
 Frame = -2

Query: 305  P*QVCKVQNSLHGLKQA*RQRYVKLSTALKTRGYQNSDNGFYLLYNKVIGFIVFVVVHQG 126
            P  VCK+  +L+GLKQA R  Y +LS  L   G+Q S     L +    G I+FV+++  
Sbjct: 1075 PGYVCKLDKALYGLKQAPRAWYSRLSKKLYDLGFQGSKGDTSLFFYNKGGLIIFVLIYVD 1134

Query: 125  DILLTRNRLKQMIKLKQ 75
            DI++T +R + +  L Q
Sbjct: 1135 DIIVTSSRQEAVSALLQ 1151



 Score = 23.9 bits (50), Expect(2) = 2e-06
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -3

Query: 73   LESEFKSNNLGNPHCFSGIEI 11
            L+ EF   +LG+ H F GIE+
Sbjct: 1153 LKKEFALKDLGDLHYFLGIEV 1173


>gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|52353546|gb|AAU44112.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1256

 Score = 52.4 bits (124), Expect(2) = 4e-06
 Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
 Frame = -2

Query: 356  LDEDI*HKAP-S*DGAL*P*QVCKVQNSLHGLKQA*RQRYVKLSTALKTRGYQNSDNGFY 180
            L+E++  K P   +  + P  VCK+  +L+GLKQA R  Y KLS  L+  G+Q S     
Sbjct: 866  LEEEVYMKQPPGYEDKVHPDYVCKLDKALYGLKQAPRAWYAKLSQKLQHLGFQGSKADTS 925

Query: 179  LLYNKVIGFIVFVVVHQGDILLTRNR 102
            L +    G I+FV+V+  DI++  +R
Sbjct: 926  LFFYNKGGLIIFVLVYVDDIIVASSR 951



 Score = 23.1 bits (48), Expect(2) = 4e-06
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -3

Query: 73   LESEFKSNNLGNPHCFSGIEI 11
            L+ +F   +LG+ H F GIE+
Sbjct: 962  LQKDFALKDLGDLHYFLGIEV 982


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