BLASTX nr result

ID: Atractylodes22_contig00038368 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00038368
         (453 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324500.1| predicted protein [Populus trichocarpa] gi|2...   115   4e-24
ref|XP_002269611.1| PREDICTED: RING-H2 finger protein ATL13 [Vit...   105   3e-21
emb|CAN71824.1| hypothetical protein VITISV_042464 [Vitis vinifera]   102   3e-20
ref|XP_002309383.1| predicted protein [Populus trichocarpa] gi|2...   100   1e-19
ref|XP_002533989.1| ring finger protein, putative [Ricinus commu...    94   9e-18

>ref|XP_002324500.1| predicted protein [Populus trichocarpa] gi|222865934|gb|EEF03065.1|
           predicted protein [Populus trichocarpa]
          Length = 468

 Score =  115 bits (288), Expect = 4e-24
 Identities = 72/156 (46%), Positives = 89/156 (57%), Gaps = 8/156 (5%)
 Frame = +1

Query: 1   TQVKKQAYKKSNLPITPGHRPAMSECGGDSRRDFKGIEAYTXXXXXXXXXXXA------- 159
           T +KKQ+ KK  LP+TPGHRPAMSEC  +SRR+F G E+             +       
Sbjct: 316 TPMKKQSSKKPTLPLTPGHRPAMSECDCESRREFDGFESLKSVEVNGTASIVSSSGNGIG 375

Query: 160 -MRRESFSVSKIWLRGKKEKLNSTTAAAIEPSSTETFSLQFLLRQNVAGDELKASEVGCD 336
             +RESFS+SKIWLRGKK K NS      E SS   FS +F + +NV  D     + GCD
Sbjct: 376 RSKRESFSISKIWLRGKKVKQNSP-----EDSSRRAFSFRFPVNKNVVAD----GQWGCD 426

Query: 337 DQETQSFHGLYPQAAATPSNPPSFAKRTLLWLMGRQ 444
           +Q  QS + L  Q        PSFA+RTLLWL+GRQ
Sbjct: 427 EQ-NQSCNSLELQV-----KTPSFARRTLLWLVGRQ 456


>ref|XP_002269611.1| PREDICTED: RING-H2 finger protein ATL13 [Vitis vinifera]
          Length = 543

 Score =  105 bits (263), Expect = 3e-21
 Identities = 75/185 (40%), Positives = 94/185 (50%), Gaps = 37/185 (20%)
 Frame = +1

Query: 1   TQVKKQAYKKSNLPITPGHRPAMSECGGDSRRDFKGIEAYTXXXXXXXXXXXAM------ 162
           T VKK + K+ +LP+TPG R AMSEC  +SRR+F G +A              +      
Sbjct: 357 TPVKKTSTKRRSLPLTPGGRMAMSECDCESRREFSGFDAVKGGDTHMGSSSSIITGNNGN 416

Query: 163 -------RRESFSVSKIWLRGKKEKLNSTTAAAIEPSSTETFSLQFLLR-QNVAGDELK- 315
                  +RESFS+SKIWLRGKKE  +S T      SS   FS +F +   + A D+LK 
Sbjct: 417 GNAIGRSKRESFSISKIWLRGKKENPSSRTV----DSSRRAFSYRFPVHSSSAAADDLKL 472

Query: 316 ----------------------ASEVGCDDQETQSFHGLYPQAAATPSNPPSFAKRTLLW 429
                                  SE+GC D+E QS + L  QA     NPPSFA+RTLLW
Sbjct: 473 KNVSSSTGRTVSELEIGRWENGGSELGC-DEEMQSCNSLDSQA-----NPPSFARRTLLW 526

Query: 430 LMGRQ 444
           LMGRQ
Sbjct: 527 LMGRQ 531


>emb|CAN71824.1| hypothetical protein VITISV_042464 [Vitis vinifera]
          Length = 543

 Score =  102 bits (254), Expect = 3e-20
 Identities = 74/185 (40%), Positives = 93/185 (50%), Gaps = 37/185 (20%)
 Frame = +1

Query: 1   TQVKKQAYKKSNLPITPGHRPAMSECGGDSRRDFKGIEAYTXXXXXXXXXXXAM------ 162
           T VKK + K+ +LP+TPG R AMSEC  +SRR+F G +A              +      
Sbjct: 357 TPVKKTSTKRRSLPLTPGGRMAMSECDCESRREFSGFDAVKGGDTHMGSSSSIITGNNGN 416

Query: 163 -------RRESFSVSKIWLRGKKEKLNSTTAAAIEPSSTETFSLQFLLRQNVAG------ 303
                  +RESFS+SKIWLRGKKE  +S T      SS   FS +F +  + A       
Sbjct: 417 GNAIGRSKRESFSISKIWLRGKKENPSSRTV----DSSRRAFSYRFPVHSSSAAAXDXKL 472

Query: 304 -----------DELK-------ASEVGCDDQETQSFHGLYPQAAATPSNPPSFAKRTLLW 429
                       EL+        SE+GC D+E QS + L  QA     NPPSFA+RTLLW
Sbjct: 473 KNVSSSTGRTVSELEIGRWENGGSELGC-DEEMQSCNSLDSQA-----NPPSFARRTLLW 526

Query: 430 LMGRQ 444
           LMGRQ
Sbjct: 527 LMGRQ 531


>ref|XP_002309383.1| predicted protein [Populus trichocarpa] gi|222855359|gb|EEE92906.1|
           predicted protein [Populus trichocarpa]
          Length = 464

 Score =  100 bits (249), Expect = 1e-19
 Identities = 68/157 (43%), Positives = 86/157 (54%), Gaps = 9/157 (5%)
 Frame = +1

Query: 1   TQVKKQAYKKSNLPITPGHRPAMSECGGDSRRDFKGIEAYTXXXXXXXXXXXA------- 159
           T ++KQ+  K+ LP+TPGH+ AMSEC  +SRR+F G E              A       
Sbjct: 311 TPMRKQSSMKTTLPLTPGHKLAMSECDCESRREFDGFEGLKSVQVNGSASIVASSGKTIG 370

Query: 160 -MRRESFSVSKIWLRGKKEKLNSTTAAAIEPSSTETFSLQFLLRQN-VAGDELKASEVGC 333
              RESFS SKIWLRGKKEK +ST       SS   FS +F + +N VA D+LK  +   
Sbjct: 371 RSERESFSRSKIWLRGKKEKQSST-----GESSRRAFSFRFPVNKNVVADDDLKMRK--- 422

Query: 334 DDQETQSFHGLYPQAAATPSNPPSFAKRTLLWLMGRQ 444
              ++ S H L  Q        PSFA+RTLLWL+GRQ
Sbjct: 423 --GDSDSCHRLELQ-----EKTPSFARRTLLWLVGRQ 452


>ref|XP_002533989.1| ring finger protein, putative [Ricinus communis]
           gi|223526024|gb|EEF28396.1| ring finger protein,
           putative [Ricinus communis]
          Length = 495

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 67/175 (38%), Positives = 87/175 (49%), Gaps = 27/175 (15%)
 Frame = +1

Query: 1   TQVKKQAYKKSNLPITPGHRPAMSECGGDSRRDFKGI-----------EAYTXXXXXXXX 147
           T +KKQ+ KK ++P+TPGHRPAMSEC  +SRR+F G+                       
Sbjct: 316 TPMKKQSSKKPSIPLTPGHRPAMSECDCESRREFNGLFEGIRSMEANGNVSGVVTKSIGN 375

Query: 148 XXXAMRRESFSVSKIWLRGKKEKLNSTTAAAIEPSSTETFSLQFLLRQNVA-GDE---LK 315
                +RESFS+SKIWLRG+KEK           SS   FS +F + +NV  GDE   LK
Sbjct: 376 SIGRSKRESFSISKIWLRGEKEKQKPP-----GDSSRRAFSFRFPVNKNVVPGDEDDNLK 430

Query: 316 A------------SEVGCDDQETQSFHGLYPQAAATPSNPPSFAKRTLLWLMGRQ 444
                        SE+G    E +       +     +  PSFA+RTLLWL+GRQ
Sbjct: 431 VKNGNGSGARRTNSEIGIGRWENR--FSFDEENQICNAKTPSFARRTLLWLVGRQ 483


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