BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00038361
         (1418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272556.1| PREDICTED: pentatricopeptide repeat-containi...   485   e-134
ref|XP_002302689.1| predicted protein [Populus trichocarpa] gi|2...   459   e-127
ref|XP_002515124.1| pentatricopeptide repeat-containing protein,...   456   e-126
ref|XP_002874971.1| pentatricopeptide repeat-containing protein ...   451   e-124
ref|NP_192066.2| pentatricopeptide repeat-containing protein [Ar...   449   e-124

>ref|XP_002272556.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01570
            [Vitis vinifera]
          Length = 792

 Score =  485 bits (1249), Expect = e-134
 Identities = 242/373 (64%), Positives = 290/373 (77%), Gaps = 5/373 (1%)
 Frame = +3

Query: 312  ACNELLVALRKAGMQAEFRNVFDKLREQINDFPVDVWGYNVCIHGFGNWGELETSLNLFK 491
            ACN+LLVALRKA M+ EFRNVF+KLR +  DF +D  GYN+CIH FG WG+L T+LNLFK
Sbjct: 198  ACNQLLVALRKADMKIEFRNVFEKLRAK-KDFDLDTQGYNICIHAFGCWGDLGTALNLFK 256

Query: 492  EMKEKSVTLSNLFAPDLCTYNSLIQALCFNGKVKDALIVWEELKSSGHEPDAFTYRIIIQ 671
            EMK+KS+  S+ F PDLCTYNSLI+ LC  GKVKDALIVWEELK SGHEPDAFTYRI+IQ
Sbjct: 257  EMKDKSLNSSS-FGPDLCTYNSLIRVLCLVGKVKDALIVWEELKGSGHEPDAFTYRILIQ 315

Query: 672  GCCTCYRMNDATKIFSDMQHYGFRPDTIVYNSLLDGFLKSRKLMEACQLFEKMVDDGVRA 851
            GC   YRM+DA +IF++MQ+ GF PDTIVYN+LLDG  K+RK+MEACQ+FEKMV+DGVRA
Sbjct: 316  GCSKSYRMDDAMRIFNEMQYNGFCPDTIVYNTLLDGLFKARKVMEACQVFEKMVEDGVRA 375

Query: 852  SCWTYNILIDGLFKNRRGQAAYALFGDLKKKGQFVDGITYSIIIFHICRXXXXXXXXXXX 1031
            SCWT+NI+I GLF+N R  A Y LF DLKKKG+FVDGITYSI++  +CR           
Sbjct: 376  SCWTHNIVICGLFRNGRAAAGYTLFCDLKKKGKFVDGITYSIVVLQLCREGQLEEALQLV 435

Query: 1032 XXXXARGFVVDLVTITHLLVSINKEGRNDWTDRLLKHIRNGNLMPTVLKWKANMEASMKD 1211
                ARGFVVDLVTIT LL+  +K+GR DWT+RL+KHIR+GNL+P VL WKANMEA MK 
Sbjct: 436  EEMEARGFVVDLVTITSLLIGFHKQGRWDWTERLMKHIRDGNLVPNVLNWKANMEAYMKA 495

Query: 1212 PQSREKDFTPMFPGKGDFKEILSLIISAESNPENSRHSSS--KETDDPWSSSPYMDHLAD 1385
            PQSR KD+TPMFP +G+  EI+SLI SA++  + S  S     + +D WSSSPYMD LA 
Sbjct: 496  PQSRRKDYTPMFPSEGNLSEIMSLISSADTEMDGSPGSEEDVAQHEDQWSSSPYMDQLAS 555

Query: 1386 EAKS---NGQLLS 1415
            + KS   + QLLS
Sbjct: 556  QLKSIDVSSQLLS 568



 Score = 77.8 bits (190), Expect = 6e-12
 Identities = 39/69 (56%), Positives = 52/69 (75%)
 Frame = +2

Query: 53  KLGTFLLVASIAKSLSGPGGTHNLNNGELSLISLSETLVLQILRRSSLDVSKKIDFFKWC 232
           KLG  LLVASI+K+LS  G      + +L  I +SE+LV+QIL R+S+DV +K++FF+WC
Sbjct: 18  KLGDMLLVASISKTLSERG----TRSPDLESIPISESLVVQILGRNSIDVFRKVEFFRWC 73

Query: 233 SLRHNYKHS 259
           S RHNYKHS
Sbjct: 74  SFRHNYKHS 82



 Score = 70.1 bits (170), Expect = 1e-09
 Identities = 47/156 (30%), Positives = 75/156 (48%), Gaps = 2/156 (1%)
 Frame = +3

Query: 381  KLREQINDFPVD--VWGYNVCIHGFGNWGELETSLNLFKEMKEKSVTLSNLFAPDLCTYN 554
            KL E  ++  VD  ++ YN  +  F   G    +  +F EM EK      +  PD+ TYN
Sbjct: 606  KLFEIFSNMGVDPVIYTYNSMMTAFVKKGYFNEAWGVFHEMGEK------VCPPDIATYN 659

Query: 555  SLIQALCFNGKVKDALIVWEELKSSGHEPDAFTYRIIIQGCCTCYRMNDATKIFSDMQHY 734
             +IQ L   G+   A  V + L   G   D   Y  +I       R+++ATK+F  M+  
Sbjct: 660  VIIQGLGKMGRADLASAVLDMLMKQGGYLDIVMYNTLINALGKAGRIDEATKLFEQMRSS 719

Query: 735  GFRPDTIVYNSLLDGFLKSRKLMEACQLFEKMVDDG 842
            G  PD + +N+L++   K+ +L  A +  + M+D G
Sbjct: 720  GINPDVVTFNTLIEIHAKAGQLKAAYKFLKLMLDAG 755



 Score = 69.7 bits (169), Expect = 2e-09
 Identities = 51/174 (29%), Positives = 84/174 (48%)
 Frame = +3

Query: 396  INDFPVDVWGYNVCIHGFGNWGELETSLNLFKEMKEKSVTLSNLFAPDLCTYNSLIQALC 575
            I+ F +D+   N  +  F   G+L  +  LF+      V       P + TYNS++ A  
Sbjct: 580  IDSFDIDM--VNTYLSIFLAKGKLSLACKLFEIFSNMGVD------PVIYTYNSMMTAFV 631

Query: 576  FNGKVKDALIVWEELKSSGHEPDAFTYRIIIQGCCTCYRMNDATKIFSDMQHYGFRPDTI 755
              G   +A  V+ E+      PD  TY +IIQG     R + A+ +   +   G   D +
Sbjct: 632  KKGYFNEAWGVFHEMGEKVCPPDIATYNVIIQGLGKMGRADLASAVLDMLMKQGGYLDIV 691

Query: 756  VYNSLLDGFLKSRKLMEACQLFEKMVDDGVRASCWTYNILIDGLFKNRRGQAAY 917
            +YN+L++   K+ ++ EA +LFE+M   G+     T+N LI+   K  + +AAY
Sbjct: 692  MYNTLINALGKAGRIDEATKLFEQMRSSGINPDVVTFNTLIEIHAKAGQLKAAY 745



 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 41/151 (27%), Positives = 72/151 (47%)
 Frame = +3

Query: 318  NELLVALRKAGMQAEFRNVFDKLREQINDFPVDVWGYNVCIHGFGNWGELETSLNLFKEM 497
            N ++ A  K G   E   VF ++ E++   P D+  YNV I G G  G  + +  +   +
Sbjct: 624  NSMMTAFVKKGYFNEAWGVFHEMGEKV--CPPDIATYNVIIQGLGKMGRADLASAVLDML 681

Query: 498  KEKSVTLSNLFAPDLCTYNSLIQALCFNGKVKDALIVWEELKSSGHEPDAFTYRIIIQGC 677
             ++   L      D+  YN+LI AL   G++ +A  ++E+++SSG  PD  T+  +I+  
Sbjct: 682  MKQGGYL------DIVMYNTLINALGKAGRIDEATKLFEQMRSSGINPDVVTFNTLIEIH 735

Query: 678  CTCYRMNDATKIFSDMQHYGFRPDTIVYNSL 770
                ++  A K    M   G  P+ +   +L
Sbjct: 736  AKAGQLKAAYKFLKLMLDAGCSPNHVTDTTL 766


>ref|XP_002302689.1| predicted protein [Populus trichocarpa] gi|222844415|gb|EEE81962.1|
            predicted protein [Populus trichocarpa]
          Length = 640

 Score =  459 bits (1182), Expect = e-127
 Identities = 237/397 (59%), Positives = 288/397 (72%), Gaps = 7/397 (1%)
 Frame = +3

Query: 228  GVLSDITTNILQLLDSVTDENKSFVDI---AACNELLVALRKAGMQAEFRNVFDKLREQI 398
            G+   I   +L+  D   +EN   V +    ACN LLVALR   M+ EF+ VF KLR + 
Sbjct: 16   GLALSIMFKLLEASDG-NEENAVGVSLPGSVACNALLVALRNGEMKVEFKTVFAKLRGK- 73

Query: 399  NDFPVDVWGYNVCIHGFGNWGELETSLNLFKEMKEKSVTLSNLFAPDLCTYNSLIQALCF 578
              F ++ WGYN+CIH FG WG+L TSL LFKEMKEKS+   +L  PDLCTYNSLI  LC 
Sbjct: 74   GGFELNTWGYNICIHAFGCWGDLTTSLRLFKEMKEKSLASGSL-DPDLCTYNSLIHVLCL 132

Query: 579  NGKVKDALIVWEELKSSGHEPDAFTYRIIIQGCCTCYRMNDATKIFSDMQHYGFRPDTIV 758
             GKVKDA+IV+EELK SGHEPDAFTYRI+IQGCC  Y+M DATKIFS+MQ+ GF PDT+V
Sbjct: 133  AGKVKDAVIVYEELKVSGHEPDAFTYRILIQGCCKSYQMEDATKIFSEMQYNGFLPDTVV 192

Query: 759  YNSLLDGFLKSRKLMEACQLFEKMVDDGVRASCWTYNILIDGLFKNRRGQAAYALFGDLK 938
            YNSLLDG  K+RK+MEACQLFEKMV DGVRASCWTYNILIDGL KN R +A Y LF  LK
Sbjct: 193  YNSLLDGMFKARKVMEACQLFEKMVQDGVRASCWTYNILIDGLCKNGRAEAGYNLFCGLK 252

Query: 939  KKGQFVDGITYSIIIFHICRXXXXXXXXXXXXXXXARGFVVDLVTITHLLVSINKEGRND 1118
            KKGQFVD +TYSI++  +CR                RGFVVDL+TIT LL++ +K+GR D
Sbjct: 253  KKGQFVDAVTYSIVVLLLCRKGHLEEALHLVEEMEERGFVVDLITITSLLIAFHKQGRWD 312

Query: 1119 WTDRLLKHIRNGNLMPTVLKWKANMEASMKDPQSREKDFTPMFPGKGDFKEILSLIISAE 1298
             T+RL+KHIR+ NL+P VLKW+A+MEAS+K+P    +D+TPMFP  G  +EI+S I S +
Sbjct: 313  CTERLMKHIRDVNLLPNVLKWRADMEASLKNPPRSREDYTPMFPSTGGLQEIMSSISSPK 372

Query: 1299 SNPEN----SRHSSSKETDDPWSSSPYMDHLADEAKS 1397
            S  ++       SSS +TD  WSSSPYMDHLA++AKS
Sbjct: 373  SRSDDGATEDEKSSSADTDQ-WSSSPYMDHLANQAKS 408



 Score = 68.6 bits (166), Expect = 4e-09
 Identities = 49/176 (27%), Positives = 81/176 (46%)
 Frame = +3

Query: 459 GELETSLNLFKEMKEKSVTLSNLFAPDLCTYNSLIQALCFNGKVKDALIVWEELKSSGHE 638
           G+L  +  LF+   +  V       P   TYNS++ +    G    A  V+ E+      
Sbjct: 448 GKLSLACKLFEIFTDMGVD------PVSYTYNSIMSSFVKKGYFNRAWDVFNEMGEKVCP 501

Query: 639 PDAFTYRIIIQGCCTCYRMNDATKIFSDMQHYGFRPDTIVYNSLLDGFLKSRKLMEACQL 818
           PD  TY ++IQG     R + A+ +   +   G   D ++YN+L+D   K+ ++ EA  L
Sbjct: 502 PDIATYNLVIQGLGKMGRADLASSVLDKLMKQGGYLDIVMYNTLIDALGKAGRIDEANNL 561

Query: 819 FEKMVDDGVRASCWTYNILIDGLFKNRRGQAAYALFGDLKKKGQFVDGITYSIIIF 986
           FE+M   G+     TYNI+I+   K  R + AY     +   G   + +T + + F
Sbjct: 562 FEQMKISGLNPDVVTYNIMIEVHSKTGRLKDAYKFLKMMLDAGCLPNHVTDTTLDF 617



 Score = 62.4 bits (150), Expect = 3e-07
 Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 1/199 (0%)
 Frame = +3

Query: 390 EQINDFPVDVWGYNVCIHGFGNWGE-LETSLNLFKEMKEKSVTLSNLFAPDLCTYNSLIQ 566
           E+ +    D W  +  +    N  +  + S  LF   + + V      + D+   N+ + 
Sbjct: 383 EKSSSADTDQWSSSPYMDHLANQAKSTDLSSQLFSLARGQRVQAKGAGSFDIDMVNTFLS 442

Query: 567 ALCFNGKVKDALIVWEELKSSGHEPDAFTYRIIIQGCCTCYRMNDATKIFSDMQHYGFRP 746
                GK+  A  ++E     G +P ++TY  I+         N A  +F++M      P
Sbjct: 443 IFLAKGKLSLACKLFEIFTDMGVDPVSYTYNSIMSSFVKKGYFNRAWDVFNEMGEKVCPP 502

Query: 747 DTIVYNSLLDGFLKSRKLMEACQLFEKMVDDGVRASCWTYNILIDGLFKNRRGQAAYALF 926
           D   YN ++ G  K  +   A  + +K++  G       YN LID L K  R   A  LF
Sbjct: 503 DIATYNLVIQGLGKMGRADLASSVLDKLMKQGGYLDIVMYNTLIDALGKAGRIDEANNLF 562

Query: 927 GDLKKKGQFVDGITYSIII 983
             +K  G   D +TY+I+I
Sbjct: 563 EQMKISGLNPDVVTYNIMI 581


>ref|XP_002515124.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223545604|gb|EEF47108.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 898

 Score =  456 bits (1173), Expect = e-126
 Identities = 230/369 (62%), Positives = 274/369 (74%), Gaps = 7/369 (1%)
 Frame = +3

Query: 312  ACNELLVALRKAGMQAEFRNVFDKLREQINDFPVDVWGYNVCIHGFGNWGELETSLNLFK 491
            ACN LLVALRKA M+ EF+ VFDKL+     F +D WGYN+CIH FG W +L T+L LFK
Sbjct: 227  ACNTLLVALRKADMRVEFKKVFDKLKGM--GFELDTWGYNICIHAFGCWSDLGTALRLFK 284

Query: 492  EMKEKSVTLSNLFAPDLCTYNSLIQALCFNGKVKDALIVWEELKSSGHEPDAFTYRIIIQ 671
            EMKEKS    +   PDLCTYNSLI+ LCF+GKVKDAL+V+EELK SGHEPDAFTYRIII+
Sbjct: 285  EMKEKSKGFGSC-CPDLCTYNSLIRLLCFSGKVKDALVVYEELKISGHEPDAFTYRIIIE 343

Query: 672  GCCTCYRMNDATKIFSDMQHYGFRPDTIVYNSLLDGFLKSRKLMEACQLFEKMVDDGVRA 851
            GC   YRMNDATKIFS+MQ+ GF PDT VYNSLLDG  K+RK+ EACQLFEKMV DGVRA
Sbjct: 344  GCSKSYRMNDATKIFSEMQYNGFVPDTTVYNSLLDGMFKARKVTEACQLFEKMVQDGVRA 403

Query: 852  SCWTYNILIDGLFKNRRGQAAYALFGDLKKKGQFVDGITYSIIIFHICRXXXXXXXXXXX 1031
            S WTYNILIDGL KN R  A Y+LF DLKKKG+FVD ITYSII+  +CR           
Sbjct: 404  SSWTYNILIDGLCKNGRSAAGYSLFCDLKKKGKFVDAITYSIIVLLLCREGQLKEALSLV 463

Query: 1032 XXXXARGFVVDLVTITHLLVSINKEGRNDWTDRLLKHIRNGNLMPTVLKWKANMEASMKD 1211
                 RGFVVDLVTIT LL++ +K+GR DWT++L+KH+R+GNL+P VL W+A+MEAS+K+
Sbjct: 464  EEMEERGFVVDLVTITSLLIAFHKQGRWDWTEKLMKHVRDGNLVPNVLNWQADMEASLKN 523

Query: 1212 PQSREKDFTPMFPGKGDFKEILSLI-------ISAESNPENSRHSSSKETDDPWSSSPYM 1370
            P+SR KD+TPMF   G   EI+++I          + N      + S ETD  WSSSPYM
Sbjct: 524  PRSRRKDYTPMFLSNGSLSEIINIIRYPDLKNHGLDDNAVEHGDNISAETDQ-WSSSPYM 582

Query: 1371 DHLADEAKS 1397
            DHLA++ KS
Sbjct: 583  DHLANQVKS 591



 Score = 73.9 bits (180), Expect = 9e-11
 Identities = 39/69 (56%), Positives = 49/69 (71%)
 Frame = +2

Query: 53  KLGTFLLVASIAKSLSGPGGTHNLNNGELSLISLSETLVLQILRRSSLDVSKKIDFFKWC 232
           +L + LLVA + K+LS  G    + N +   I LSE L+LQILR++SLD SKKI+FFKWC
Sbjct: 48  QLESILLVAFLNKALSESG----VRNLDPDFIPLSEPLILQILRQNSLDASKKIEFFKWC 103

Query: 233 SLRHNYKHS 259
           S  HNYKHS
Sbjct: 104 SFSHNYKHS 112



 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 52/200 (26%), Positives = 89/200 (44%), Gaps = 3/200 (1%)
 Frame = +3

Query: 396  INDFPVDVWGYNVCIHGFGNWGELETSLNLFKEMKEKSVTLSNLFAPDLCTYNSLIQALC 575
            +  F +D+   N  +  F   G+L  +  LF+   +  V       P   TYNS++ +  
Sbjct: 612  VESFDIDM--VNTFLSIFLAKGKLSVACKLFEIFSDMGVN------PVSYTYNSIMSSFV 663

Query: 576  FNGKVKDALIVWEELKSSGHE---PDAFTYRIIIQGCCTCYRMNDATKIFSDMQHYGFRP 746
              G   +A   W+ L   G +    D  TY +IIQG     R + A+ +   +   G   
Sbjct: 664  KKGYFSEA---WDVLNQMGEKVCPSDIATYNLIIQGLGKMGRADLASSVLDKLMKQGGYL 720

Query: 747  DTIVYNSLLDGFLKSRKLMEACQLFEKMVDDGVRASCWTYNILIDGLFKNRRGQAAYALF 926
            D ++YN+L++   K+ ++ E  +LFE+M   G+     TYN LI+   K  R + AY   
Sbjct: 721  DIVMYNTLINALGKAGRIDEVRKLFEQMKTSGINPDVVTYNTLIEVHTKAGRLKDAYKFL 780

Query: 927  GDLKKKGQFVDGITYSIIIF 986
              +   G   + +T + + F
Sbjct: 781  KMMLDAGCLPNHVTDTTLDF 800


>ref|XP_002874971.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297320808|gb|EFH51230.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 802

 Score =  451 bits (1159), Expect = e-124
 Identities = 214/360 (59%), Positives = 269/360 (74%)
 Frame = +3

Query: 312  ACNELLVALRKAGMQAEFRNVFDKLREQINDFPVDVWGYNVCIHGFGNWGELETSLNLFK 491
            A NELLV LR+A M++EF+ VF+KL+  +N F  D W YN+CIHGFG WG+L+ +L+LFK
Sbjct: 212  AVNELLVGLRRADMRSEFKTVFEKLKG-MNRFKFDTWSYNICIHGFGCWGDLDAALSLFK 270

Query: 492  EMKEKSVTLSNLFAPDLCTYNSLIQALCFNGKVKDALIVWEELKSSGHEPDAFTYRIIIQ 671
            EMKE+S    + FAPD+CTYNSLI  LC  GK KDALIVW+ELK SGHEPD  TYRI+IQ
Sbjct: 271  EMKERSSVSGSSFAPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQ 330

Query: 672  GCCTCYRMNDATKIFSDMQHYGFRPDTIVYNSLLDGFLKSRKLMEACQLFEKMVDDGVRA 851
            GCC  YRM+DA +IF +MQ+ GF PDT+VYN LLDG LK+RK+ EACQLFEKMV +GVRA
Sbjct: 331  GCCKSYRMDDAMRIFGEMQYNGFVPDTVVYNCLLDGTLKARKVTEACQLFEKMVQEGVRA 390

Query: 852  SCWTYNILIDGLFKNRRGQAAYALFGDLKKKGQFVDGITYSIIIFHICRXXXXXXXXXXX 1031
            SCWTYNILIDGLF+N R +A + LF DLKKKGQFVD IT+SI++  +CR           
Sbjct: 391  SCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVVLQLCREGKLEEAVKLV 450

Query: 1032 XXXXARGFVVDLVTITHLLVSINKEGRNDWTDRLLKHIRNGNLMPTVLKWKANMEASMKD 1211
                 RGF VDLVTI+ LL+  +K+GR DW ++L+KH+R GNL+P VL+W A +EAS+K 
Sbjct: 451  EEMETRGFTVDLVTISSLLIGFHKQGRWDWKEKLMKHVREGNLVPNVLRWNAGVEASLKR 510

Query: 1212 PQSREKDFTPMFPGKGDFKEILSLIISAESNPENSRHSSSKETDDPWSSSPYMDHLADEA 1391
            PQ ++KD+TPMFP KG F +I+S+ +  E +   +      E DDPWSSSPYMD LA ++
Sbjct: 511  PQRKDKDYTPMFPSKGSFLDIMSM-VGLEDDGARAEEVPPME-DDPWSSSPYMDQLAHQS 568



 Score = 68.2 bits (165), Expect = 5e-09
 Identities = 41/78 (52%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
 Frame = +2

Query: 29  PHPNTLKTKLGTFLLVASIAKSLSGPGGTHNLNNGELSLISLSETLVLQILRRSSLDVSK 208
           P  N+   +L   LLVAS++K+LS   GT  L   + + I +SE +VLQILRR+S+D SK
Sbjct: 18  PATNSPFPQLCNVLLVASLSKTLS-QSGTRGL---DANSIPISEPVVLQILRRNSIDPSK 73

Query: 209 KIDFFKWC-SLRHNYKHS 259
           K+DFF+WC SLR  YKHS
Sbjct: 74  KLDFFRWCYSLRTGYKHS 91



 Score = 65.1 bits (157), Expect = 4e-08
 Identities = 45/150 (30%), Positives = 69/150 (46%)
 Frame = +3

Query: 426  YNVCIHGFGNWGELETSLNLFKEMKEKSVTLSNLFAPDLCTYNSLIQALCFNGKVKDALI 605
            YN  +  F   G  +T   +  +M E      N  A D+ TYN +IQ L   G+   A  
Sbjct: 631  YNSMMSSFVKKGYFKTVRGVLDQMGE------NFCAADIATYNVIIQGLGKMGRADLAGA 684

Query: 606  VWEELKSSGHEPDAFTYRIIIQGCCTCYRMNDATKIFSDMQHYGFRPDTIVYNSLLDGFL 785
            V + L   G   D   Y  +I       R++ AT++F  M+  G  PD + YN++++   
Sbjct: 685  VLDRLTKQGGYLDIVMYNTLINAIGKANRLDAATQLFDHMKSNGINPDVVSYNTMIEVNS 744

Query: 786  KSRKLMEACQLFEKMVDDGVRASCWTYNIL 875
            K+ KL EA +  + M+D G   +  T  IL
Sbjct: 745  KAGKLKEAYKYLKAMLDAGCLPNHVTDTIL 774



 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 48/194 (24%), Positives = 88/194 (45%)
 Frame = +3

Query: 399  NDFPVDVWGYNVCIHGFGNWGELETSLNLFKEMKEKSVTLSNLFAPDLCTYNSLIQALCF 578
            + F VD+   N  +  + + G+L  +  LF+      VT    +     TYNS++ +   
Sbjct: 588  DSFDVDMM--NTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSY-----TYNSMMSSFVK 640

Query: 579  NGKVKDALIVWEELKSSGHEPDAFTYRIIIQGCCTCYRMNDATKIFSDMQHYGFRPDTIV 758
             G  K    V +++  +    D  TY +IIQG     R + A  +   +   G   D ++
Sbjct: 641  KGYFKTVRGVLDQMGENFCAADIATYNVIIQGLGKMGRADLAGAVLDRLTKQGGYLDIVM 700

Query: 759  YNSLLDGFLKSRKLMEACQLFEKMVDDGVRASCWTYNILIDGLFKNRRGQAAYALFGDLK 938
            YN+L++   K+ +L  A QLF+ M  +G+     +YN +I+   K  + + AY     + 
Sbjct: 701  YNTLINAIGKANRLDAATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAML 760

Query: 939  KKGQFVDGITYSII 980
              G   + +T +I+
Sbjct: 761  DAGCLPNHVTDTIL 774


>ref|NP_192066.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75161629|sp|Q8VZE4.1|PP299_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At4g01570 gi|18086402|gb|AAL57659.1| AT4g01570/T15B16_21
            [Arabidopsis thaliana] gi|24797024|gb|AAN64524.1|
            At4g01570/T15B16_21 [Arabidopsis thaliana]
            gi|332656643|gb|AEE82043.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 805

 Score =  449 bits (1156), Expect = e-124
 Identities = 221/389 (56%), Positives = 278/389 (71%), Gaps = 7/389 (1%)
 Frame = +3

Query: 243  ITTNILQLLDSVTDENKSFVDIA-------ACNELLVALRKAGMQAEFRNVFDKLREQIN 401
            I   +L+  D+ +D++   V I        A NELLV LR+A M++EF+ VF+KL+  + 
Sbjct: 184  ILFKLLEASDNHSDDDTGRVIIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKG-MK 242

Query: 402  DFPVDVWGYNVCIHGFGNWGELETSLNLFKEMKEKSVTLSNLFAPDLCTYNSLIQALCFN 581
             F  D W YN+CIHGFG WG+L+ +L+LFKEMKE+S    + F PD+CTYNSLI  LC  
Sbjct: 243  RFKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLF 302

Query: 582  GKVKDALIVWEELKSSGHEPDAFTYRIIIQGCCTCYRMNDATKIFSDMQHYGFRPDTIVY 761
            GK KDALIVW+ELK SGHEPD  TYRI+IQGCC  YRM+DA +I+ +MQ+ GF PDTIVY
Sbjct: 303  GKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVY 362

Query: 762  NSLLDGFLKSRKLMEACQLFEKMVDDGVRASCWTYNILIDGLFKNRRGQAAYALFGDLKK 941
            N LLDG LK+RK+ EACQLFEKMV +GVRASCWTYNILIDGLF+N R +A + LF DLKK
Sbjct: 363  NCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKK 422

Query: 942  KGQFVDGITYSIIIFHICRXXXXXXXXXXXXXXXARGFVVDLVTITHLLVSINKEGRNDW 1121
            KGQFVD IT+SI+   +CR                RGF VDLVTI+ LL+  +K+GR DW
Sbjct: 423  KGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDW 482

Query: 1122 TDRLLKHIRNGNLMPTVLKWKANMEASMKDPQSREKDFTPMFPGKGDFKEILSLIISAES 1301
             ++L+KHIR GNL+P VL+W A +EAS+K PQS++KD+TPMFP KG F +I+S++ S + 
Sbjct: 483  KEKLMKHIREGNLVPNVLRWNAGVEASLKRPQSKDKDYTPMFPSKGSFLDIMSMVGSEDD 542

Query: 1302 NPENSRHSSSKETDDPWSSSPYMDHLADE 1388
                S    S   DDPWSSSPYMD LA +
Sbjct: 543  GA--SAEEVSPMEDDPWSSSPYMDQLAHQ 569



 Score = 68.6 bits (166), Expect = 4e-09
 Identities = 41/78 (52%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
 Frame = +2

Query: 29  PHPNTLKTKLGTFLLVASIAKSLSGPGGTHNLNNGELSLISLSETLVLQILRRSSLDVSK 208
           P  N+   +L   LLVAS++K+LS   GT +L   + + I +SE +VLQILRR+S+D SK
Sbjct: 18  PAKNSPFPQLCNVLLVASLSKTLS-QSGTRSL---DANSIPISEPVVLQILRRNSIDPSK 73

Query: 209 KIDFFKWC-SLRHNYKHS 259
           K+DFF+WC SLR  YKHS
Sbjct: 74  KLDFFRWCYSLRPGYKHS 91



 Score = 68.6 bits (166), Expect = 4e-09
 Identities = 45/150 (30%), Positives = 71/150 (47%)
 Frame = +3

Query: 426  YNVCIHGFGNWGELETSLNLFKEMKEKSVTLSNLFAPDLCTYNSLIQALCFNGKVKDALI 605
            YN  +  F   G  +T+  +  +M E      N  A D+ TYN +IQ L   G+   A  
Sbjct: 633  YNSMMSSFVKKGYFQTARGVLDQMFE------NFCAADIATYNVIIQGLGKMGRADLASA 686

Query: 606  VWEELKSSGHEPDAFTYRIIIQGCCTCYRMNDATKIFSDMQHYGFRPDTIVYNSLLDGFL 785
            V + L   G   D   Y  +I       R+++AT++F  M+  G  PD + YN++++   
Sbjct: 687  VLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNS 746

Query: 786  KSRKLMEACQLFEKMVDDGVRASCWTYNIL 875
            K+ KL EA +  + M+D G   +  T  IL
Sbjct: 747  KAGKLKEAYKYLKAMLDAGCLPNHVTDTIL 776



 Score = 62.4 bits (150), Expect = 3e-07
 Identities = 49/194 (25%), Positives = 91/194 (46%)
 Frame = +3

Query: 399  NDFPVDVWGYNVCIHGFGNWGELETSLNLFKEMKEKSVTLSNLFAPDLCTYNSLIQALCF 578
            + F VD+   N  +  + + G+L  +  LF+      VT    +     TYNS++ +   
Sbjct: 590  DSFDVDMM--NTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSY-----TYNSMMSSFVK 642

Query: 579  NGKVKDALIVWEELKSSGHEPDAFTYRIIIQGCCTCYRMNDATKIFSDMQHYGFRPDTIV 758
             G  + A  V +++  +    D  TY +IIQG     R + A+ +   +   G   D ++
Sbjct: 643  KGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVM 702

Query: 759  YNSLLDGFLKSRKLMEACQLFEKMVDDGVRASCWTYNILIDGLFKNRRGQAAYALFGDLK 938
            YN+L++   K+ +L EA QLF+ M  +G+     +YN +I+   K  + + AY     + 
Sbjct: 703  YNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAML 762

Query: 939  KKGQFVDGITYSII 980
              G   + +T +I+
Sbjct: 763  DAGCLPNHVTDTIL 776