BLASTX nr result

ID: Atractylodes22_contig00038340 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00038340
         (540 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18893.3| unnamed protein product [Vitis vinifera]              112   5e-23
ref|XP_002284814.1| PREDICTED: putative tRNA pseudouridine synth...   110   1e-22
ref|XP_002510624.1| conserved hypothetical protein [Ricinus comm...    95   8e-18
emb|CAN83944.1| hypothetical protein VITISV_013561 [Vitis vinifera]    92   5e-17
ref|NP_173466.2| Pseudouridine synthase family protein [Arabidop...    85   6e-15

>emb|CBI18893.3| unnamed protein product [Vitis vinifera]
          Length = 591

 Score =  112 bits (279), Expect = 5e-23
 Identities = 62/155 (40%), Positives = 94/155 (60%)
 Frame = -1

Query: 465 AATNEMKLLETAVQELPAHAVKDLISQEVCVRCIFRLFNVQEGIYALVSPTTLYSIIEKA 286
           A  ++M++L  AV ++  HAVKDL+S  +C+ CIFRL  V+  I++   P+ L SI+   
Sbjct: 62  AGEDDMRILNDAVSKVSPHAVKDLLSLGICIGCIFRLSGVRGHIFSC--PSLLLSILHPV 119

Query: 285 TEVEAMATKSSGETEDVKIPHXXXXXXXXXXXSVCLGALQFSYCDERDMLVEKDHAEDFA 106
            +  A  +    E E V               S+CLG LQF+Y D++ MLV+KD A++ A
Sbjct: 120 IDSGAAHSSQESECEPV-------------ICSICLGVLQFTYFDDKKMLVKKDSADELA 166

Query: 105 MTVAESVKEKHHEIASFSLEVSLPTLITENEEVIL 1
           +++A  VK++ HE  +FSLEVS+P +I ENE V+L
Sbjct: 167 VSIANLVKKEGHEFDNFSLEVSIPPVIAENEHVVL 201


>ref|XP_002284814.1| PREDICTED: putative tRNA pseudouridine synthase Pus10-like [Vitis
           vinifera]
          Length = 578

 Score =  110 bits (275), Expect = 1e-22
 Identities = 61/158 (38%), Positives = 94/158 (59%), Gaps = 3/158 (1%)
 Frame = -1

Query: 465 AATNEMKLLETAVQELPAHAVKDLISQEVCVRCIFRLFNVQEGIYALVSP--TTLYSIIE 292
           A  ++M++L  AV ++  HAVKDL+S  +C+ CIFRL  V+  I++  S   + L+ +I 
Sbjct: 31  AGEDDMRILNDAVSKVSPHAVKDLLSLGICIGCIFRLSGVRGHIFSCPSLLLSILHPVIG 90

Query: 291 KATEVEAMATKSSGETEDVKIPHXXXXXXXXXXXS-VCLGALQFSYCDERDMLVEKDHAE 115
           + T+         G  ED    H             +CLG LQF+Y D++ MLV+KD A+
Sbjct: 91  EPTDSSTHRYTGIGGNEDSGAAHSSQESECEPVICSICLGVLQFTYFDDKKMLVKKDSAD 150

Query: 114 DFAMTVAESVKEKHHEIASFSLEVSLPTLITENEEVIL 1
           + A+++A  VK++ HE  +FSLEVS+P +I ENE V+L
Sbjct: 151 ELAVSIANLVKKEGHEFDNFSLEVSIPPVIAENEHVVL 188


>ref|XP_002510624.1| conserved hypothetical protein [Ricinus communis]
           gi|223551325|gb|EEF52811.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 565

 Score = 94.7 bits (234), Expect = 8e-18
 Identities = 56/153 (36%), Positives = 92/153 (60%), Gaps = 3/153 (1%)
 Frame = -1

Query: 453 EMKLLETAVQELPAHAVKDLISQEVCVRCIFRLFNVQEGIYAL--VSPTTLYSIIEKATE 280
           +M+L   AV+ LP+HAVK L+   +C+RCIFRL  VQ  I+    +S + +++I+ ++ +
Sbjct: 34  DMRLFNEAVRSLPSHAVKGLLRNGICMRCIFRLLGVQGHIFFTYPLSRSLMHNILGESWK 93

Query: 279 VEAMATKSSGETEDVK-IPHXXXXXXXXXXXSVCLGALQFSYCDERDMLVEKDHAEDFAM 103
                     + ED+K               +VCLG LQF + D++ +LV+K +A +  +
Sbjct: 94  ----------DDEDMKGCSTYNESGVDQEICNVCLGILQFIHRDDKGVLVKKHNAVNLCV 143

Query: 102 TVAESVKEKHHEIASFSLEVSLPTLITENEEVI 4
           ++AE +K++ H+I SFSLEVS+  +I ENE VI
Sbjct: 144 SIAELIKQEGHQIDSFSLEVSIAPIIQENERVI 176


>emb|CAN83944.1| hypothetical protein VITISV_013561 [Vitis vinifera]
          Length = 872

 Score = 92.0 bits (227), Expect = 5e-17
 Identities = 50/137 (36%), Positives = 80/137 (58%), Gaps = 3/137 (2%)
 Frame = -1

Query: 402 KDLISQEVCVRCIFRLFNVQEGIYALVSP--TTLYSIIEKATEVEAMATKSSGETEDVKI 229
           +D++  ++C+ CIFRL  V+  I++  S   + L+ +I + T+         G  ED   
Sbjct: 519 EDILGLQICIGCIFRLSGVRGHIFSCPSLLLSILHXVIGEPTDSSTHRYTGIGGNEDSGA 578

Query: 228 PHXXXXXXXXXXXS-VCLGALQFSYCDERDMLVEKDHAEDFAMTVAESVKEKHHEIASFS 52
            H             +CLG LQF+Y D++ MLV+KD A++ A+++A  VK++ HE  +FS
Sbjct: 579 AHSSQESECEPVICSICLGVLQFTYFDDKKMLVKKDSADELAVSIANLVKKEGHEFDNFS 638

Query: 51  LEVSLPTLITENEEVIL 1
           LEVS+P +I ENE V+L
Sbjct: 639 LEVSIPPVIAENEHVVL 655


>ref|NP_173466.2| Pseudouridine synthase family protein [Arabidopsis thaliana]
           gi|332191849|gb|AEE29970.1| Pseudouridine synthase
           family protein [Arabidopsis thaliana]
          Length = 504

 Score = 85.1 bits (209), Expect = 6e-15
 Identities = 58/151 (38%), Positives = 84/151 (55%), Gaps = 2/151 (1%)
 Frame = -1

Query: 447 KLLETAVQELPAHAVKDLISQEVCVRCIFRLFNVQ--EGIYALVSPTTLYSIIEKATEVE 274
           ++ ETA + L   AVKDL+S  VC RCIFRL +V+  +   + VS +TL S + K+ + E
Sbjct: 29  RVYETA-RSLHTGAVKDLLSLGVCERCIFRLVSVEAFDSDISSVSTSTLRSWL-KSGDDE 86

Query: 273 AMATKSSGETEDVKIPHXXXXXXXXXXXSVCLGALQFSYCDERDMLVEKDHAEDFAMTVA 94
             A++SS  T  +                VCLG LQF + D +  LV+ D + D+   + 
Sbjct: 87  TSASESSCSTICI----------------VCLGILQFVFSDVKKELVKSDSSSDYVARIT 130

Query: 93  ESVKEKHHEIASFSLEVSLPTLITENEEVIL 1
           + VK+  HE  SF LEVS+P+ I ENE  +L
Sbjct: 131 DLVKQDRHEFDSFGLEVSVPSTIMENERALL 161


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