BLASTX nr result
ID: Atractylodes22_contig00038315
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes22_contig00038315
(601 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004141297.1| PREDICTED: pre-mRNA-processing protein 40A-l... 183 2e-44
emb|CBI19367.3| unnamed protein product [Vitis vinifera] 181 9e-44
ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 hom... 174 1e-41
ref|XP_002320019.1| predicted protein [Populus trichocarpa] gi|2... 158 8e-37
ref|XP_003563698.1| PREDICTED: pre-mRNA-processing factor 40 hom... 156 3e-36
>ref|XP_004141297.1| PREDICTED: pre-mRNA-processing protein 40A-like [Cucumis sativus]
Length = 985
Score = 183 bits (464), Expect = 2e-44
Identities = 104/205 (50%), Positives = 137/205 (66%), Gaps = 11/205 (5%)
Frame = -1
Query: 583 SVSSANDG-SLMIHGVASSPMAVKPHTPVGNSPPNLGLDSSSIASGEMGTPFPVSPTVNG 407
++SS N S + GVA+SP+ V P V NSP + SS+I + + VS TV+
Sbjct: 293 AISSVNSSISPTVSGVATSPVPVTPFVSVSNSPSVMVTGSSAITGTPIASTTSVSGTVSS 352
Query: 406 ASIV---------LAITSSSPKTNLENSYSHAVTNALDGAPVQDVKEAKKGMSIAGKVN- 257
S+ + ++S T E+ S V N +DG +D++EA+KGM++AGKVN
Sbjct: 353 QSVAASGGTGPPAVVHANASSVTPFESLASQDVKNTVDGTSTEDIEEARKGMAVAGKVNE 412
Query: 256 VAQEEKVVDVEPLLYASKQEAKVAFKSLLESANLEADCSWEQAMRVIINDKRYGALKTLG 77
EEK D EPL++A+KQEAK AFK+LLES N+++D +WEQAMR IINDKRYGALKTLG
Sbjct: 413 TVLEEKSADDEPLVFANKQEAKNAFKALLESVNVQSDWTWEQAMREIINDKRYGALKTLG 472
Query: 76 ERKQAFNEYLMDKKKLDAEERRLRQ 2
ERKQAF+EYL +KKLDAEERR+RQ
Sbjct: 473 ERKQAFHEYLGHRKKLDAEERRIRQ 497
>emb|CBI19367.3| unnamed protein product [Vitis vinifera]
Length = 1030
Score = 181 bits (459), Expect = 9e-44
Identities = 104/209 (49%), Positives = 144/209 (68%), Gaps = 14/209 (6%)
Frame = -1
Query: 586 ASVSSANDGSLMIHGVASSPMAVKPHTPVGNSPPNLGLDSSSIASGE------------- 446
ASVS ++ S I G+ SSP+ V P V N PP + +S+I +
Sbjct: 332 ASVSVSSTTSSTISGMTSSPVPVTPVVAVVNPPPVVVSGTSAIPIAQSAVTTSAVGVQPS 391
Query: 445 MGTPFPVSPTVNGASIVLAITSSSPKTNLENSYSHAVTNALDGAPVQDVKEAKKGMSIAG 266
MGTP P + V+G++ V A + T++ S+ + +A +GA +QD++EAKKG+++AG
Sbjct: 392 MGTPLPAA--VSGSTGVAAAFINPNATSM-TSFENLSADATNGASMQDIEEAKKGVAVAG 448
Query: 265 KVNVAQ-EEKVVDVEPLLYASKQEAKVAFKSLLESANLEADCSWEQAMRVIINDKRYGAL 89
K+NV EEK +D EPL+Y++K EAK AFK+LLESAN+E+D +W+QAM+ IINDKRYGAL
Sbjct: 449 KINVTPLEEKTLDDEPLVYSTKLEAKNAFKALLESANVESDWTWDQAMKAIINDKRYGAL 508
Query: 88 KTLGERKQAFNEYLMDKKKLDAEERRLRQ 2
KTLGERKQAFNEYL +KK++AEERR+RQ
Sbjct: 509 KTLGERKQAFNEYLGQRKKIEAEERRMRQ 537
>ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 homolog B-like [Vitis
vinifera]
Length = 1020
Score = 174 bits (441), Expect = 1e-41
Identities = 103/209 (49%), Positives = 139/209 (66%), Gaps = 14/209 (6%)
Frame = -1
Query: 586 ASVSSANDGSLMIHGVASSPMAVKPHTPVGNSPPNLGLDSSSIASGE------------- 446
ASVS ++ S I G+ SSP+ V P V N PP + +S+I +
Sbjct: 336 ASVSVSSTTSSTISGMTSSPVPVTPVVAVVNPPPVVVSGTSAIPIAQSAVTTSAVGVQPS 395
Query: 445 MGTPFPVSPTVNGASIVLAITSSSPKTNLENSYSHAVTNALDGAPVQDVKEAKKGMSIAG 266
MGTP P + V+G++ V A S+ +A +GA +QD++EAKKG+++AG
Sbjct: 396 MGTPLPAA--VSGSTGVAANLSA---------------DATNGASMQDIEEAKKGVAVAG 438
Query: 265 KVNVAQ-EEKVVDVEPLLYASKQEAKVAFKSLLESANLEADCSWEQAMRVIINDKRYGAL 89
K+NV EEK +D EPL+Y++K EAK AFK+LLESAN+E+D +W+QAM+ IINDKRYGAL
Sbjct: 439 KINVTPLEEKTLDDEPLVYSTKLEAKNAFKALLESANVESDWTWDQAMKAIINDKRYGAL 498
Query: 88 KTLGERKQAFNEYLMDKKKLDAEERRLRQ 2
KTLGERKQAFNEYL +KK++AEERR+RQ
Sbjct: 499 KTLGERKQAFNEYLGQRKKIEAEERRMRQ 527
>ref|XP_002320019.1| predicted protein [Populus trichocarpa] gi|222860792|gb|EEE98334.1|
predicted protein [Populus trichocarpa]
Length = 1019
Score = 158 bits (399), Expect = 8e-37
Identities = 93/204 (45%), Positives = 127/204 (62%), Gaps = 13/204 (6%)
Frame = -1
Query: 574 SANDGSLMIHGVASSPMAVKPHTPVGNSPPNL-----------GLDSSSIASGEMGTPFP 428
S + S+M+ GV+SSP++V T V N PP + +S++ TP P
Sbjct: 312 SVSSSSVMLPGVSSSPISV---TAVANPPPVVVSGSPALPVAHSTTASAVGVQPSVTPLP 368
Query: 427 VSPTVN-GASIVLAITSSSPKTNLENSYSHAVTNALDGAPVQDVKEAKKGMSIAGKVNVA 251
+ +V GA ++ ++++N S + N++DGA + D E K GK N +
Sbjct: 369 TAVSVGTGAPAAAVDAKTTSLSSIDNLLSQSAANSVDGASMMDTAEFNKVSMDMGKTNAS 428
Query: 250 Q-EEKVVDVEPLLYASKQEAKVAFKSLLESANLEADCSWEQAMRVIINDKRYGALKTLGE 74
EEK D EPL++A+K EAK AFK+LLESAN+++D +WEQ MR IINDKRY ALKTLGE
Sbjct: 429 PLEEKTPDEEPLVFANKLEAKNAFKALLESANVQSDWTWEQTMREIINDKRYAALKTLGE 488
Query: 73 RKQAFNEYLMDKKKLDAEERRLRQ 2
RKQAFNEYL +KKL+AEERR+RQ
Sbjct: 489 RKQAFNEYLGQRKKLEAEERRVRQ 512
>ref|XP_003563698.1| PREDICTED: pre-mRNA-processing factor 40 homolog A-like
[Brachypodium distachyon]
Length = 998
Score = 156 bits (394), Expect = 3e-36
Identities = 93/202 (46%), Positives = 131/202 (64%), Gaps = 12/202 (5%)
Frame = -1
Query: 571 ANDGSLMIHGVASSPMAVKPHTPVG-NSPPNLGLD-SSSIASGEMGTP---------FPV 425
AN S ++ +AS+ + P+ ++PP GL + IAS + T PV
Sbjct: 298 ANQSSSVVGIIASTTHDALANLPLPPDAPPGAGLSYNGDIASSHVDTQNGGTSASVVAPV 357
Query: 424 SPTVNGASIVLAITSSSPKTNLENSYSHAVTNALDGAPVQDVKEAKKGMSIAGKVNVAQ- 248
+ + +S+ AI + + + N E+S T+ DGA +D++EAKK M AGK+NV
Sbjct: 358 TTSTGVSSV--AIDAGTSRNNYESSSRTITTDTKDGASAEDLEEAKKTMPTAGKINVTPL 415
Query: 247 EEKVVDVEPLLYASKQEAKVAFKSLLESANLEADCSWEQAMRVIINDKRYGALKTLGERK 68
EEK + EP +YA+K EAK AFK+LLESAN+E+D SW+QAMRVIINDKRYGAL++ GERK
Sbjct: 416 EEKTSEEEPPVYANKLEAKNAFKALLESANVESDWSWDQAMRVIINDKRYGALRSHGERK 475
Query: 67 QAFNEYLMDKKKLDAEERRLRQ 2
Q +NEYL +KK++AEERR++Q
Sbjct: 476 QVYNEYLNQRKKIEAEERRVKQ 497