BLASTX nr result

ID: Atractylodes22_contig00038266 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00038266
         (268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004161669.1| PREDICTED: LOW QUALITY PROTEIN: gamma-tubuli...    70   2e-10
ref|XP_004144694.1| PREDICTED: gamma-tubulin complex component 3...    70   2e-10
emb|CBI29999.3| unnamed protein product [Vitis vinifera]               69   5e-10
ref|XP_002871227.1| hypothetical protein ARALYDRAFT_487478 [Arab...    67   2e-09
ref|NP_196286.1| spindle pole body component 98 [Arabidopsis tha...    66   3e-09

>ref|XP_004161669.1| PREDICTED: LOW QUALITY PROTEIN: gamma-tubulin complex component
           3-like [Cucumis sativus]
          Length = 846

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 36/88 (40%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
 Frame = +3

Query: 3   KVISEDRNCNP-KFQTDRSFTNDSNFSGSNDNLRVMRGYSPRKLKNGGILFISRDPDNMR 179
           K+++EDR C   +F++     N      S+  L    G +P K    G+L +++DP+N+R
Sbjct: 109 KIVAEDRKCRQTQFESSMLLPN---LVASDPVLGKKSGAAPEKEWQKGVLLVAKDPENLR 165

Query: 180 DMAYKEFATLVNGENHVSEEVLVRDVLF 263
           D+A+KEF+ L+  EN V+EEVLVRDVL+
Sbjct: 166 DVAFKEFSNLLKEENEVTEEVLVRDVLY 193


>ref|XP_004144694.1| PREDICTED: gamma-tubulin complex component 3-like [Cucumis sativus]
          Length = 846

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 36/88 (40%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
 Frame = +3

Query: 3   KVISEDRNCNP-KFQTDRSFTNDSNFSGSNDNLRVMRGYSPRKLKNGGILFISRDPDNMR 179
           K+++EDR C   +F++     N      S+  L    G +P K    G+L +++DP+N+R
Sbjct: 109 KIVAEDRKCRQTQFESSMLLPN---LVASDPVLGKKSGAAPEKEWQKGVLLVAKDPENLR 165

Query: 180 DMAYKEFATLVNGENHVSEEVLVRDVLF 263
           D+A+KEF+ L+  EN V+EEVLVRDVL+
Sbjct: 166 DVAFKEFSNLLKEENEVTEEVLVRDVLY 193


>emb|CBI29999.3| unnamed protein product [Vitis vinifera]
          Length = 777

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 43/87 (49%), Positives = 57/87 (65%)
 Frame = +3

Query: 3   KVISEDRNCNPKFQTDRSFTNDSNFSGSNDNLRVMRGYSPRKLKNGGILFISRDPDNMRD 182
           KVISEDR  N K ++D   +  S FS S     V +G+      N G+L +S+DP+N+R+
Sbjct: 105 KVISEDRK-NQKSRSDSRVS--SGFSAS-----VEKGW------NNGVLLVSKDPENIRE 150

Query: 183 MAYKEFATLVNGENHVSEEVLVRDVLF 263
           +A +EFA LV  EN VSEEVLVRDVL+
Sbjct: 151 IAVREFANLVKEENEVSEEVLVRDVLY 177


>ref|XP_002871227.1| hypothetical protein ARALYDRAFT_487478 [Arabidopsis lyrata subsp.
           lyrata] gi|297317064|gb|EFH47486.1| hypothetical protein
           ARALYDRAFT_487478 [Arabidopsis lyrata subsp. lyrata]
          Length = 838

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 36/87 (41%), Positives = 55/87 (63%)
 Frame = +3

Query: 3   KVISEDRNCNPKFQTDRSFTNDSNFSGSNDNLRVMRGYSPRKLKNGGILFISRDPDNMRD 182
           K++S+DR        D S    +   G   N+   RG + +K  + G+L +S+DP+N+RD
Sbjct: 110 KIVSDDRKSAIN-GLDSSVLLPNLGLGDAGNVFSRRGEAKKKDWSNGVLLVSKDPENLRD 168

Query: 183 MAYKEFATLVNGENHVSEEVLVRDVLF 263
           +A++E+A LV  EN V+EEVLVRDVL+
Sbjct: 169 IAFREYAVLVKEENEVTEEVLVRDVLY 195


>ref|NP_196286.1| spindle pole body component 98 [Arabidopsis thaliana]
           gi|9759296|dbj|BAB09802.1| gamma-tubulin interacting
           protein-like [Arabidopsis thaliana]
           gi|20466522|gb|AAM20578.1| gamma-tubulin interacting
           protein-like [Arabidopsis thaliana]
           gi|34365713|gb|AAQ65168.1| At5g06680 [Arabidopsis
           thaliana] gi|332003666|gb|AED91049.1| spindle pole body
           component 98 [Arabidopsis thaliana]
          Length = 838

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 36/87 (41%), Positives = 55/87 (63%)
 Frame = +3

Query: 3   KVISEDRNCNPKFQTDRSFTNDSNFSGSNDNLRVMRGYSPRKLKNGGILFISRDPDNMRD 182
           K++S+DR        D S    +   G   N  + RG + +K  + G+L +S+DP+N+RD
Sbjct: 110 KIVSDDRKSAIN-GLDSSVLLPNLGIGDTGNGVLSRGEAKKKDWSNGVLLVSKDPENLRD 168

Query: 183 MAYKEFATLVNGENHVSEEVLVRDVLF 263
           +A++E+A LV  EN V+EEVLVRDVL+
Sbjct: 169 IAFREYAILVKEENEVTEEVLVRDVLY 195


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