BLASTX nr result

ID: Atractylodes22_contig00038243 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00038243
         (503 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263207.2| PREDICTED: DEAD-box ATP-dependent RNA helica...    83   3e-14
emb|CAN65105.1| hypothetical protein VITISV_021046 [Vitis vinifera]    83   3e-14
ref|XP_004139902.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    70   1e-10
ref|XP_003596088.1| DEAD-box ATP-dependent RNA helicase [Medicag...    68   7e-10
ref|XP_002311293.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08

>ref|XP_002263207.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 36-like [Vitis
           vinifera] gi|297736137|emb|CBI24175.3| unnamed protein
           product [Vitis vinifera]
          Length = 489

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 44/78 (56%), Positives = 58/78 (74%), Gaps = 1/78 (1%)
 Frame = -3

Query: 234 QALVDENFPLFSP-KPTHGSSKPTATTLADNPISSHHQFVKHTSSSSTPNLTFADLGLSD 58
           + LVDENFPLFS  KPT   SK  +TT A NP  +  Q +  T++ ++P+ TFADLGL++
Sbjct: 4   ETLVDENFPLFSKRKPTPKPSK-NSTTTAQNP--NPEQPLTRTTNPTSPSSTFADLGLAE 60

Query: 57  WALQTCKELGMKKPTPVQ 4
           WA+Q CKELGM++PTPVQ
Sbjct: 61  WAVQACKELGMRRPTPVQ 78


>emb|CAN65105.1| hypothetical protein VITISV_021046 [Vitis vinifera]
          Length = 592

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 44/78 (56%), Positives = 58/78 (74%), Gaps = 1/78 (1%)
 Frame = -3

Query: 234 QALVDENFPLFSP-KPTHGSSKPTATTLADNPISSHHQFVKHTSSSSTPNLTFADLGLSD 58
           + LVDENFPLFS  KPT   SK  +TT A NP  +  Q +  T++ ++P+ TFADLGL++
Sbjct: 107 ETLVDENFPLFSKRKPTPKPSK-NSTTTAQNP--NPEQPLTRTTNPTSPSSTFADLGLAE 163

Query: 57  WALQTCKELGMKKPTPVQ 4
           WA+Q CKELGM++PTPVQ
Sbjct: 164 WAVQACKELGMRRPTPVQ 181


>ref|XP_004139902.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 36-like [Cucumis
           sativus] gi|449475871|ref|XP_004154575.1| PREDICTED:
           DEAD-box ATP-dependent RNA helicase 36-like [Cucumis
           sativus]
          Length = 491

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 41/81 (50%), Positives = 51/81 (62%), Gaps = 4/81 (4%)
 Frame = -3

Query: 234 QALVDENFPLFSPKPTHGSSKPTATTLADNPISSHH--QFVKHT--SSSSTPNLTFADLG 67
           + +VD NFPLFS KP     KP+    A   ++     Q  K T  ++ ST N+TFADLG
Sbjct: 4   EVIVDRNFPLFS-KPHRKKHKPSENPTAVPNVAPKKSLQIEKSTELTTKSTNNITFADLG 62

Query: 66  LSDWALQTCKELGMKKPTPVQ 4
           LS+W +QTCKEL MKKPT VQ
Sbjct: 63  LSEWIIQTCKELVMKKPTAVQ 83


>ref|XP_003596088.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
           gi|355485136|gb|AES66339.1| DEAD-box ATP-dependent RNA
           helicase [Medicago truncatula]
          Length = 513

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 38/81 (46%), Positives = 47/81 (58%), Gaps = 3/81 (3%)
 Frame = -3

Query: 234 QALVDENFPLFSPKPTHGSSKPTATTLADNPISSHHQFVKHTSSSSTPN---LTFADLGL 64
           Q LVD+NFPLF P     S KP+            +  V H + +S P     TF+DLGL
Sbjct: 5   QPLVDQNFPLFKP-----SRKPSINPTLPISNKPQNDVVTHETLNSNPENTTATFSDLGL 59

Query: 63  SDWALQTCKELGMKKPTPVQQ 1
           S+WA++TCKELGMK P  VQQ
Sbjct: 60  SEWAVKTCKELGMKTPRRVQQ 80


>ref|XP_002311293.1| predicted protein [Populus trichocarpa] gi|222851113|gb|EEE88660.1|
           predicted protein [Populus trichocarpa]
          Length = 496

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 38/84 (45%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
 Frame = -3

Query: 228 LVDENFPLFSPKPTHGSSKPTATTLADNPISSHHQFVKHTSSSSTPN---------LTFA 76
           +VD NFPLFS  P     + T      NP  S         +SS P+           F+
Sbjct: 11  VVDSNFPLFSKTPKRPKLQKT-----QNPDESPEIPKLEKEASSNPSNPDSAAAKTTLFS 65

Query: 75  DLGLSDWALQTCKELGMKKPTPVQ 4
           DLGLS+WALQTCKELGMK PT VQ
Sbjct: 66  DLGLSEWALQTCKELGMKNPTQVQ 89


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