BLASTX nr result

ID: Atractylodes22_contig00038209 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00038209
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320544.1| predicted protein [Populus trichocarpa] gi|2...   118   6e-25
ref|XP_002524567.1| cell cycle regulatory protein, putative [Ric...   111   5e-23
ref|XP_004146506.1| PREDICTED: probable E3 ubiquitin-protein lig...   110   1e-22
emb|CAN68367.1| hypothetical protein VITISV_018178 [Vitis vinifera]   105   8e-22
ref|XP_002266143.1| PREDICTED: probable E3 ubiquitin-protein lig...   105   8e-22

>ref|XP_002320544.1| predicted protein [Populus trichocarpa] gi|222861317|gb|EEE98859.1|
           predicted protein [Populus trichocarpa]
          Length = 413

 Score =  118 bits (295), Expect = 6e-25
 Identities = 58/107 (54%), Positives = 73/107 (68%), Gaps = 2/107 (1%)
 Frame = +3

Query: 45  ETILKVSLGWGHALALTKDGKLFGWGYSADGRLGTRGGITRASPLDSKENM--STMVKQT 218
           + I KVS GWGH LA T +GKLFGWGY ADGRLG  GG+  ASPLDS  N+    ++ Q+
Sbjct: 143 QKIAKVSFGWGHTLAQTVEGKLFGWGYLADGRLGKMGGLVEASPLDSSMNVVKHEVITQS 202

Query: 219 XXXXXXXXXXXXXXXMDEEKDMPIVWEPCLIEELEGVEVLDMSCGLD 359
                          M++EKDMPIVW+PC +EEL+GVEV+D++CGLD
Sbjct: 203 ---TVEVAERLVLEGMEKEKDMPIVWDPCSVEELKGVEVVDIACGLD 246


>ref|XP_002524567.1| cell cycle regulatory protein, putative [Ricinus communis]
           gi|223536120|gb|EEF37775.1| cell cycle regulatory
           protein, putative [Ricinus communis]
          Length = 441

 Score =  111 bits (278), Expect = 5e-23
 Identities = 54/103 (52%), Positives = 67/103 (65%)
 Frame = +3

Query: 51  ILKVSLGWGHALALTKDGKLFGWGYSADGRLGTRGGITRASPLDSKENMSTMVKQTXXXX 230
           I KVS GWGHALAL+++GKLFGWGYSADGRLG   G    S LDS  N     +Q     
Sbjct: 177 IAKVSFGWGHALALSEEGKLFGWGYSADGRLGKIMGALEVSALDSNAN-----QQVPKLM 231

Query: 231 XXXXXXXXXXXMDEEKDMPIVWEPCLIEELEGVEVLDMSCGLD 359
                      M++E DMPI+W+PCL+EEL G +V+D++CGLD
Sbjct: 232 LEASERLVLEGMEKENDMPILWDPCLVEELHGTKVVDIACGLD 274


>ref|XP_004146506.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Cucumis
           sativus] gi|449499975|ref|XP_004160968.1| PREDICTED:
           probable E3 ubiquitin-protein ligase HERC2-like [Cucumis
           sativus]
          Length = 452

 Score =  110 bits (275), Expect = 1e-22
 Identities = 55/105 (52%), Positives = 69/105 (65%)
 Frame = +3

Query: 45  ETILKVSLGWGHALALTKDGKLFGWGYSADGRLGTRGGITRASPLDSKENMSTMVKQTXX 224
           E I+KVS GWGHALA ++DGKLFGWGY ADGRLG  G   + SPLDS    ST  ++   
Sbjct: 183 EKIVKVSFGWGHALAFSEDGKLFGWGYYADGRLGNVGRTMKMSPLDSSSYRSTTGQE--Q 240

Query: 225 XXXXXXXXXXXXXMDEEKDMPIVWEPCLIEELEGVEVLDMSCGLD 359
                        M+EEK+MPI+WEP L+E+   VEV+D++CGLD
Sbjct: 241 PNIELAERLVLESMEEEKNMPIIWEPHLVEDETAVEVVDIACGLD 285


>emb|CAN68367.1| hypothetical protein VITISV_018178 [Vitis vinifera]
          Length = 458

 Score =  105 bits (263), Expect(2) = 8e-22
 Identities = 53/105 (50%), Positives = 68/105 (64%)
 Frame = +3

Query: 45  ETILKVSLGWGHALALTKDGKLFGWGYSADGRLGTRGGITRASPLDSKENMSTMVKQTXX 224
           E I+KVSLGWGHALA T+DGKLFGWGYSADGRLG  G      PL+S  +     ++   
Sbjct: 192 EKIVKVSLGWGHALAQTEDGKLFGWGYSADGRLGQVGKALEVFPLNSVAD-----RELSS 246

Query: 225 XXXXXXXXXXXXXMDEEKDMPIVWEPCLIEELEGVEVLDMSCGLD 359
                        +++EK+MPI+WEP LIEE  GV ++D++CGLD
Sbjct: 247 SKLEVAEKMVLKGIEKEKNMPIIWEPSLIEEENGVGIVDVACGLD 291



 Score = 22.7 bits (47), Expect(2) = 8e-22
 Identities = 9/13 (69%), Positives = 12/13 (92%)
 Frame = +1

Query: 1   RIEALANEEIIKV 39
           R+EALA E+I+KV
Sbjct: 185 RVEALAREKIVKV 197


>ref|XP_002266143.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Vitis
           vinifera]
          Length = 432

 Score =  105 bits (263), Expect(2) = 8e-22
 Identities = 53/105 (50%), Positives = 68/105 (64%)
 Frame = +3

Query: 45  ETILKVSLGWGHALALTKDGKLFGWGYSADGRLGTRGGITRASPLDSKENMSTMVKQTXX 224
           E I+KVSLGWGHALA T+DGKLFGWGYSADGRLG  G      PL+S  +     ++   
Sbjct: 166 EKIVKVSLGWGHALAQTEDGKLFGWGYSADGRLGQVGKALEVFPLNSVAD-----RELSS 220

Query: 225 XXXXXXXXXXXXXMDEEKDMPIVWEPCLIEELEGVEVLDMSCGLD 359
                        +++EK+MPI+WEP LIEE  GV ++D++CGLD
Sbjct: 221 SKLEVAENMVLKGIEKEKNMPIIWEPSLIEEENGVGIVDVACGLD 265



 Score = 22.7 bits (47), Expect(2) = 8e-22
 Identities = 9/13 (69%), Positives = 12/13 (92%)
 Frame = +1

Query: 1   RIEALANEEIIKV 39
           R+EALA E+I+KV
Sbjct: 159 RVEALAREKIVKV 171


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