BLASTX nr result

ID: Atractylodes22_contig00038146 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00038146
         (1206 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69520.1| hypothetical protein VITISV_018331 [Vitis vinifera]   386   e-105
ref|XP_003635270.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   372   e-100
ref|XP_002329596.1| predicted protein [Populus trichocarpa] gi|2...   360   5e-97
ref|XP_003550925.1| PREDICTED: pentatricopeptide repeat-containi...   351   2e-94
ref|XP_002533788.1| pentatricopeptide repeat-containing protein,...   350   4e-94

>emb|CAN69520.1| hypothetical protein VITISV_018331 [Vitis vinifera]
          Length = 444

 Score =  386 bits (992), Expect = e-105
 Identities = 210/383 (54%), Positives = 264/383 (68%), Gaps = 15/383 (3%)
 Frame = -2

Query: 1205 ILDMISCRGALPYLADRKGLHKPFLIPLGSRNLRLGLKLQVLPHLLHENSLVKLERKQGL 1026
            +LDM  C  +L    DR   HK  L+P+ S  L+ GLKLQ++P LL ++S+ K++ KQ L
Sbjct: 63   VLDMCRCWDSLSIQKDRNDPHKTCLVPIESYYLKEGLKLQIVPELLQKDSVFKMDSKQEL 122

Query: 1025 VIHXXXXXXXXXXXXXXLVIQYKRQGRISELSKLLSRIQTEQGSVEMNNLCSDVIDACIH 846
            ++               L+I YKR GRI ELS+L+  +Q E G++E   L SDVIDACI 
Sbjct: 123  LLFRNGKYVLSNKALAKLIIAYKRDGRIGELSRLMLSLQKELGTLE-GGLISDVIDACIQ 181

Query: 845  MGWLETAHDILDDIEREGNLASTGSYASLLTAYYKGKKHREAEALLKQIRKAGIII--SD 672
            +GWLETAHDILDD+E  G  AS+ +Y SLLTAYYKGK  REA+ALLKQ+RKAG+I+  SD
Sbjct: 182  LGWLETAHDILDDMELAGAPASSITYMSLLTAYYKGKMVREAKALLKQMRKAGLIVDLSD 241

Query: 671  VGGTSSCMSKPIVSRR-----------SDLITFLVQEMREGDIDCL--IYEFNSSIYFFM 531
                ++C+S  +   R           S L   LV+EM++ +   L  +Y+FNSSIYFF 
Sbjct: 242  EMVMTTCLSGVVDKNRMHTRTSTSIWKSGLAESLVREMKKQEKAILPVVYKFNSSIYFFC 301

Query: 530  KAKMIDDALKAYQSMQGKKVHPTVATYIYMVMGYSSLAMYREITFLWGDIKRSSDDGNLL 351
            KAKMIDDAL+ Y  MQ  K+ PTV T+I +V GYS L MYREIT LWGDIK S   G+L+
Sbjct: 302  KAKMIDDALRIYGRMQEMKIEPTVQTFINLVYGYSCLNMYREITILWGDIKSSRKSGSLV 361

Query: 350  INRDLYEVLILNFLKGGYFERVMEVIGCMKKHGMYPGKWLYRSEFLKLHKDLYKNLKSSN 171
            + RDLYE L+LNFL+GGYFERVMEVIGCMK+  MY  KW+Y+ EFLK HKDLY+NLK+SN
Sbjct: 362  VCRDLYEFLVLNFLRGGYFERVMEVIGCMKEQNMYCDKWMYKREFLKFHKDLYRNLKASN 421

Query: 170  ARTEAQCKRLAHVKDFRKWAGID 102
             RTEAQ KRL +V+ FR WAGID
Sbjct: 422  TRTEAQSKRLEYVEAFRTWAGID 444


>ref|XP_003635270.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g17616-like, partial [Vitis vinifera]
          Length = 457

 Score =  372 bits (955), Expect = e-100
 Identities = 200/368 (54%), Positives = 252/368 (68%)
 Frame = -2

Query: 1205 ILDMISCRGALPYLADRKGLHKPFLIPLGSRNLRLGLKLQVLPHLLHENSLVKLERKQGL 1026
            +LDM  CR +L    DR   +K  L P+GS +LR GLK+Q++P LL ++S+ K++ KQ L
Sbjct: 105  VLDMCRCRDSLSIRKDRNESYKTCLGPIGSYHLREGLKIQIVPELLQKDSVFKMDSKQEL 164

Query: 1025 VIHXXXXXXXXXXXXXXLVIQYKRQGRISELSKLLSRIQTEQGSVEMNNLCSDVIDACIH 846
            V+               LVI Y+  GRI ELS+L+  +Q E G++E   L SDVIDACI 
Sbjct: 165  VLFSNGKYVLSNKALVKLVIAYQGDGRIGELSRLMLSLQKELGTLEGGGLISDVIDACIQ 224

Query: 845  MGWLETAHDILDDIEREGNLASTGSYASLLTAYYKGKKHREAEALLKQIRKAGIIISDVG 666
            +GWLETAH ILDD+E  G    + +Y SLLTAYYKGK  REA+ALLKQ+RKAG ++    
Sbjct: 225  LGWLETAHGILDDMELAGAPIGSSTYMSLLTAYYKGKMAREAKALLKQMRKAGFVVD--- 281

Query: 665  GTSSCMSKPIVSRRSDLITFLVQEMREGDIDCLIYEFNSSIYFFMKAKMIDDALKAYQSM 486
                      +S    + T L+    E  I  ++YEFNSSIYFF KAK IDDAL+ Y+ M
Sbjct: 282  ----------LSDEMVMTTCLLGV--EKTILPVVYEFNSSIYFFCKAKKIDDALRIYRRM 329

Query: 485  QGKKVHPTVATYIYMVMGYSSLAMYREITFLWGDIKRSSDDGNLLINRDLYEVLILNFLK 306
            Q  ++ PTV T I +V GYS L MYREIT LWG+IKRS + G+L++ RDLYE L+LNFL+
Sbjct: 330  QETEIEPTVQTSINLVYGYSCLNMYREITILWGNIKRSRESGSLVVCRDLYEFLVLNFLR 389

Query: 305  GGYFERVMEVIGCMKKHGMYPGKWLYRSEFLKLHKDLYKNLKSSNARTEAQCKRLAHVKD 126
            GGYFERVMEVIG MK+  MY  KW+Y+SEFLK HKDLY+NLK+SN RTEAQ KRL +V+ 
Sbjct: 390  GGYFERVMEVIGHMKEQNMYCDKWMYKSEFLKFHKDLYRNLKASNTRTEAQSKRLEYVEA 449

Query: 125  FRKWAGID 102
            FRKWAGID
Sbjct: 450  FRKWAGID 457


>ref|XP_002329596.1| predicted protein [Populus trichocarpa] gi|222870305|gb|EEF07436.1|
            predicted protein [Populus trichocarpa]
          Length = 701

 Score =  360 bits (923), Expect = 5e-97
 Identities = 191/377 (50%), Positives = 260/377 (68%), Gaps = 9/377 (2%)
 Frame = -2

Query: 1205 ILDMISCRGALPYLADRKGLHKPFLIPLGSRNLRLGLKLQVLPHLLHENSLVKLERKQGL 1026
            +LDM   + ++P    R    K  L+P+GS NL+ GLK+QV+P LL ++S++ ++ KQ L
Sbjct: 325  LLDMHKFQESVPNKKLRMDQEKRLLVPIGSNNLKTGLKIQVMPELLQKDSILTVKHKQEL 384

Query: 1025 VIHXXXXXXXXXXXXXXLVIQYKRQGRISELSKLLSRIQTEQGSVEMNNLCSDVIDACIH 846
            V+               LV  Y+R GR ++LSKLL  +Q +   +  ++ CSDVIDACI 
Sbjct: 385  VMFRSGKLLLSNRALAKLVNGYRRHGRTTDLSKLLLCMQQDFHVLGQSSFCSDVIDACIR 444

Query: 845  MGWLETAHDILDDIEREGNLASTGSYASLLTAYYKGKKHREAEALLKQIRKAGIII--SD 672
            +GWLE AHDILDD++  G    +  + +LLTAYY  +  +EA+ALL+++RKAG ++  SD
Sbjct: 445  LGWLEMAHDILDDMDAAGAPIGSTLHMALLTAYYCREMFKEAKALLRKMRKAGFVVNLSD 504

Query: 671  VGGTSSCMSKPI-----VSRRSDLITFLVQEMREGD--IDCLIYEFNSSIYFFMKAKMID 513
                ++C+S+        S +SDLI FL++EMRE +  I  + YE NSSIY+F KAKM++
Sbjct: 505  EMVATACLSEAANNASSSSSKSDLIDFLIREMREEEKAIPSVGYELNSSIYYFCKAKMME 564

Query: 512  DALKAYQSMQGKKVHPTVATYIYMVMGYSSLAMYREITFLWGDIKRSSDDGNLLINRDLY 333
            DALK Y+ MQ  K+ PTV T+ Y++ G+SSL MYR+IT LWGDIKR+    +L ++RDLY
Sbjct: 565  DALKTYKRMQHMKIQPTVQTFSYLIDGFSSLGMYRDITILWGDIKRNVGSKDLEVSRDLY 624

Query: 332  EVLILNFLKGGYFERVMEVIGCMKKHGMYPGKWLYRSEFLKLHKDLYKNLKSSNARTEAQ 153
            EVL LNFL+GGYFER MEVIG MK+  MY  KW+Y+ EFLKLHK+LY++LK+S ARTEAQ
Sbjct: 625  EVLHLNFLRGGYFERAMEVIGYMKERNMYCDKWMYKDEFLKLHKNLYRSLKASEARTEAQ 684

Query: 152  CKRLAHVKDFRKWAGID 102
             KRL HVK FRKW GID
Sbjct: 685  SKRLEHVKAFRKWVGID 701


>ref|XP_003550925.1| PREDICTED: pentatricopeptide repeat-containing protein At4g17616-like
            [Glycine max]
          Length = 684

 Score =  351 bits (900), Expect = 2e-94
 Identities = 187/374 (50%), Positives = 248/374 (66%), Gaps = 6/374 (1%)
 Frame = -2

Query: 1205 ILDMISCRGALPYLADRKGLHKPFLIPLGSRNLRLGLKLQVLPHLLHENSLVKLERKQGL 1026
            +LDM S           K L KP  I +GS  LR  LK+ + P LLH++S++K+E +Q L
Sbjct: 311  VLDMTSSHNYDVKKECEKHLQKPCFIAIGSPFLRTVLKIHIEPELLHKDSVLKVESRQDL 370

Query: 1025 VIHXXXXXXXXXXXXXXLVIQYKRQGRISELSKLLSRIQTEQGSVEMNNLCSDVIDACIH 846
            + +               +  YK+ GRI ELSKLL  IQ E  SV  ++LCSDVI ACI 
Sbjct: 371  IFYKGGKLVLSNSALAKFISGYKKYGRIGELSKLLLSIQGELNSVAGSSLCSDVIGACIQ 430

Query: 845  MGWLETAHDILDDIEREGNLASTGSYASLLTAYYKGKKHREAEALLKQIRKAGII--ISD 672
            +GWLE AHDILDD+E  G+     +Y  L++AY KG   RE +ALLKQ++K G+   +SD
Sbjct: 431  LGWLECAHDILDDVEATGSPMGRDTYMLLVSAYQKGGMQRETKALLKQMKKVGLDKGLSD 490

Query: 671  --VGGTSSCMSKPIVSRRSDLITFLVQEMREGD--IDCLIYEFNSSIYFFMKAKMIDDAL 504
              +   + C        ++DL   LVQ +++ D  +  L+Y  NSSI+FF KA MI+DAL
Sbjct: 491  DAIDEHNLCEETLNSLGKADLAIALVQILKDEDQTVFPLVYNLNSSIFFFCKAGMIEDAL 550

Query: 503  KAYQSMQGKKVHPTVATYIYMVMGYSSLAMYREITFLWGDIKRSSDDGNLLINRDLYEVL 324
            +AY+ M   K+ PT  T+ +++ GYSSL MYREIT LWGDIKR    GNL+ NRDLYE+L
Sbjct: 551  RAYRRMVDMKIQPTSQTFAFLMCGYSSLGMYREITILWGDIKRFMRSGNLVGNRDLYELL 610

Query: 323  ILNFLKGGYFERVMEVIGCMKKHGMYPGKWLYRSEFLKLHKDLYKNLKSSNARTEAQCKR 144
            +LNFL+GGYFERV+EVI  M+ H MYP KW+Y++EFL+LHK+LY++LK+SN RTEAQ KR
Sbjct: 611  LLNFLRGGYFERVLEVISHMRDHNMYPDKWMYKNEFLRLHKNLYRSLKASNTRTEAQSKR 670

Query: 143  LAHVKDFRKWAGID 102
            L HV++FRKW GID
Sbjct: 671  LEHVQEFRKWVGID 684


>ref|XP_002533788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223526289|gb|EEF28601.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 689

 Score =  350 bits (898), Expect = 4e-94
 Identities = 188/382 (49%), Positives = 253/382 (66%), Gaps = 14/382 (3%)
 Frame = -2

Query: 1205 ILDMISCRGALPYLADRKGLHKPFLIPLGSRNLRLGLKLQVLPHLLHENSLVKLERKQGL 1026
            +LDM   RG  P    +    KP L+ +GS+NLR GLK+Q+LP +L + S++++E  +GL
Sbjct: 315  VLDMNRFRGLNPNKKPKND-QKPCLVSIGSQNLRAGLKIQILPEVLQKESVIRVEHGKGL 373

Query: 1025 VIHXXXXXXXXXXXXXXLVIQYKRQGRISELSKLLSRIQTEQGSVEMNNLCSDVIDACIH 846
            +                 +  YKRQGRISEL+K+L  +Q +  ++  ++LCSDVI AC  
Sbjct: 374  LSSKNGKLLLSNRALANFIHGYKRQGRISELTKVLLSMQKDFQTIGESSLCSDVIGACAC 433

Query: 845  MGWLETAHDILDDIEREGNLASTGSYASLLTAYYKGKKHREAEALLKQIRKAGII----- 681
            +GWLETAHDILDD+E  G+  S  +Y  LLTAY   +  +EA+AL++Q+RKAG+I     
Sbjct: 434  LGWLETAHDILDDMETAGSPCSLTTYMVLLTAYRSREMFKEADALVRQLRKAGLIKNLSV 493

Query: 680  --------ISDVGGTSSCMSKPIVSRRSDLITFLVQEMREG-DIDCLIYEFNSSIYFFMK 528
                    +     +SS +SK      SDL  F++QE RE  ++   ++E NSSIYFF K
Sbjct: 494  EMVAFTSLLERADNSSSSLSK------SDLADFIIQETREEKEVTPTVHELNSSIYFFCK 547

Query: 527  AKMIDDALKAYQSMQGKKVHPTVATYIYMVMGYSSLAMYREITFLWGDIKRSSDDGNLLI 348
            AKM+ DALK Y+ MQ K + PTV T+ Y+V GYSSL  YR+IT LWGDIKR+  + N L+
Sbjct: 548  AKMMGDALKIYRKMQMKGIQPTVQTFAYLVYGYSSLGSYRDITILWGDIKRNMKNRNFLV 607

Query: 347  NRDLYEVLILNFLKGGYFERVMEVIGCMKKHGMYPGKWLYRSEFLKLHKDLYKNLKSSNA 168
            +RDLYE+L++NFL+GGYFERVMEV G MK+  MY  KW+Y+SEFLKLHK+LYK LK+S+ 
Sbjct: 608  SRDLYELLLVNFLRGGYFERVMEVAGYMKECKMYTDKWMYKSEFLKLHKNLYKCLKASDT 667

Query: 167  RTEAQCKRLAHVKDFRKWAGID 102
            R E Q KRL  V+ FRKW GID
Sbjct: 668  RNEVQRKRLEFVQTFRKWVGID 689


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